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gwf1_scaffold_41_prodigal-single.1__X__X__00346

Bact-Vir

gwf1_scaffold_41_prodigal-single.1__X__X__00346

Identity

Kingdom:
phage

Quality

82.5 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-92
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3lmmA03 3.30.565.60 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › 0.51 35.0 2.82e-01 70.0% 78.4%
8a6tB01 3.40.30.10 Alpha Beta › 3-Layer(aba) Sandwich › Glutaredoxin › Glutaredoxin 0.50 35.0 3.09e-01 73.3% 68.6%
4ianA02 1.10.510.10 Mainly Alpha › Orthogonal Bundle › Transferase(Phosphotransferase); domain 1 › Transferase(Phosphotransferase) domain 1 0.50 42.0 3.23e-01 97.8% 67.7%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5053453 386.1.1.74 ↗ few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-Di19 0.50 27.0 3.17e-01 90.0% 80.0%
D2 medium residues 102-188
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF24308.2 best DUF7487 38.1 2.10e-09 98.9% 35.0%
CATH (1)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2jo7A00 1.10.4170.10 Mainly Alpha › Orthogonal Bundle › Glycosylphosphatidylinositol-anchored merozoite surface protein › Glycosylphosphatidylinositol-anchored merozoite surface protein 0.51 43.0 3.29e-01 96.6% 75.9%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3290328 159.1.1.1 ↗ alpha bundles › all-alpha NTP pyrophosphatases › all-alpha NTP pyrophosphatases › Hypothetical protein AF_0060 › MazG 0.61 37.0 3.54e-01 77.0% 51.4%