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gwf1_scaffold_41_prodigal-single.1__X__X__00348
Bact-Virgwf1_scaffold_41_prodigal-single.1__X__X__00348
Identity
- Kingdom:
- phage
Quality
89.4
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 25-151
Domain cluster:
rep: DGJ7_scaffold_2_2069_prodigal-single.1__X__X__00356__D1-122_262-302
CATH (33)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2ge3A00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 60.0 | 5.46e-01 | 97.6% | 98.8% |
| 2cpmA00 | 3.30.1370.50 | Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain | 0.66 | 37.0 | 4.26e-01 | 85.0% | 74.5% |
| 2i79D00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.66 | 60.0 | 5.42e-01 | 97.6% | 100.0% |
| 2lxrA00 | 3.30.110.40 | Alpha Beta › 2-Layer Sandwich › Translation Initiation Factor IF3 › TusA-like domain | 0.64 | 38.0 | 4.69e-01 | 76.4% | 97.4% |
| 2x7bA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 56.0 | 5.27e-01 | 96.9% | 100.0% |
| 4kvxA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 56.0 | 5.27e-01 | 96.1% | 100.0% |
| 1dcoA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.63 | 32.0 | 3.55e-01 | 91.3% | 60.6% |
| 2ebbA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.63 | 31.0 | 3.50e-01 | 92.1% | 60.4% |
| 1usmA00 | 3.30.1360.20 | Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › Transcriptional coactivator/pterin dehydratase | 0.63 | 29.0 | 3.57e-01 | 77.2% | 68.8% |
| 3g8wB00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.63 | 56.0 | 5.14e-01 | 96.9% | 98.2% |
| 3fbuA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 57.0 | 5.17e-01 | 99.2% | 96.4% |
| 3tosA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.62 | 45.0 | 3.60e-01 | 75.6% | 78.9% |
| 2vzyC00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.62 | 57.0 | 4.94e-01 | 100.0% | 81.5% |
| 2wk1A00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.61 | 45.0 | 3.65e-01 | 75.6% | 78.5% |
| 3dnsA00 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.59 | 52.0 | 5.16e-01 | 98.4% | 93.1% |
| 3c3pA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 43.0 | 3.69e-01 | 75.6% | 75.3% |
| 1i9gA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.59 | 43.0 | 3.78e-01 | 75.6% | 85.9% |
| 1fbnA01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.58 | 23.0 | 3.36e-01 | 83.5% | 86.3% |
| 2iboA00 | 3.30.70.930 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › | 0.57 | 28.0 | 3.30e-01 | 70.9% | 64.0% |
| 3frhA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 42.0 | 3.71e-01 | 78.7% | 69.9% |
| 2b3tA02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 46.0 | 4.03e-01 | 91.3% | 84.4% |
| 3grzB00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.55 | 40.0 | 3.53e-01 | 77.2% | 75.6% |
| 4iscA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.54 | 46.0 | 4.27e-01 | 91.3% | 86.5% |
| 1x19A02 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 44.0 | 4.11e-01 | 90.6% | 86.9% |
| 3tkaA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.53 | 45.0 | 3.95e-01 | 92.1% | 75.0% |
| 2plwA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 44.0 | 3.90e-01 | 91.3% | 84.1% |
| 3k1lA01 | 3.30.457.40 | Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › | 0.52 | 31.0 | 3.59e-01 | 85.0% | 81.5% |
| 3douA00 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.52 | 43.0 | 3.89e-01 | 90.6% | 82.9% |
| 4jpdA00 | 3.30.920.10 | Alpha Beta › 2-Layer Sandwich › Metal Transport, Frataxin; Chain A › Frataxin/CyaY | 0.52 | 35.0 | 3.81e-01 | 82.7% | 81.7% |
| 3nyiA02 | 3.30.1180.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Protein Tm841; Chain: A;domain 3 › | 0.51 | 43.0 | 4.21e-01 | 90.6% | 94.9% |
| 2bhoA00 | 3.30.1460.10 | Alpha Beta › 2-Layer Sandwich › Yope Regulator; Chain: A, › | 0.51 | 33.0 | 3.58e-01 | 82.7% | 77.3% |
| 6t5kC00 | 3.60.15.10 | Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like | 0.50 | 44.0 | 3.64e-01 | 95.3% | 54.0% |
| 2q1fA03 | 2.70.98.10 | Mainly Beta › Distorted Sandwich › Beta-galactosidase; Chain A, domain 5 › | 0.50 | 43.0 | 3.41e-01 | 96.1% | 91.0% |
ECOD (43)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4950695 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.75 | 43.0 | 5.42e-01 | 70.9% | 96.0% |
| 5055166 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.74 | 41.0 | 5.38e-01 | 70.1% | 100.0% |
| 5074997 | 328.7.1.0 ↗ | a+b two layers › IF3-like › Smr domain › Smr domain | 0.73 | 41.0 | 5.19e-01 | 70.1% | 93.3% |
| 4942126 | 328.9.1.0 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain | 0.73 | 40.0 | 5.15e-01 | 70.9% | 95.7% |
| 3454258 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.73 | 41.0 | 4.91e-01 | 92.1% | 82.4% |
| 5042786 | 328.9.1.0 ↗ | a+b two layers › IF3-like › SepF C-terminal domain › SepF C-terminal domain | 0.73 | 41.0 | 5.31e-01 | 71.7% | 100.0% |
| 4030352 | 328.1.1.1 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like › Alba | 0.72 | 41.0 | 4.98e-01 | 78.0% | 87.5% |
| 5040280 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.72 | 40.0 | 5.22e-01 | 70.1% | 100.0% |
| 2469865 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.68 | 49.0 | 5.47e-01 | 91.3% | 96.9% |
| 3992359 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.68 | 39.0 | 4.39e-01 | 97.6% | 72.0% |
| 5010300 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.66 | 38.0 | 4.72e-01 | 70.9% | 94.7% |
| 3278966 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.66 | 61.0 | 5.38e-01 | 99.2% | 93.9% |
| 11079 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.66 | 60.0 | 5.46e-01 | 97.6% | 98.8% |
| 3594508 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.66 | 60.0 | 4.67e-01 | 98.4% | 81.7% |
| 3264346 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.65 | 56.0 | 4.63e-01 | 92.9% | 98.2% |
| 3800585 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.65 | 58.0 | 5.32e-01 | 96.9% | 96.4% |
| 4994004 | 328.5.1.1 ↗ | a+b two layers › IF3-like › SirA-like › SirA-like › TusA | 0.65 | 38.0 | 4.76e-01 | 71.7% | 98.7% |
| 4980010 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.64 | 58.0 | 5.35e-01 | 100.0% | 97.0% |
| 3284447 | 213.1.1.25 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_3 | 0.63 | 57.0 | 5.15e-01 | 97.6% | 95.9% |
| 3282009 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.63 | 56.0 | 5.20e-01 | 96.1% | 100.0% |
| 3963143 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.63 | 48.0 | 5.29e-01 | 86.6% | 99.0% |
| 4128823 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.63 | 56.0 | 5.22e-01 | 96.1% | 100.0% |
| 5069904 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.63 | 57.0 | 5.57e-01 | 100.0% | 95.0% |
| 3718141 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.62 | 56.0 | 4.46e-01 | 97.6% | 82.0% |
| 5036111 | 213.1.1.31 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_10 | 0.62 | 57.0 | 5.23e-01 | 98.4% | 81.9% |
| 3704272 | 2004.1.1.175 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ParA | 0.62 | 45.0 | 3.31e-01 | 74.8% | 46.9% |
| 3588798 | 213.1.1.1 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) › Acetyltransf_1 | 0.62 | 55.0 | 5.18e-01 | 95.3% | 98.7% |
| 5062515 | 213.1.1.0 ↗ | a+b three layers › Nat/Ivy › Acyl-CoA N-acyltransferases (Nat) › Acyl-CoA N-acyltransferases (Nat) | 0.62 | 56.0 | 5.56e-01 | 100.0% | 97.0% |
| 3710689 | 331.4.1.0 ↗ | a+b two layers › TBP-like › Kinase associated domain 1, KA1 › Kinase associated domain 1, KA1 | 0.61 | 38.0 | 4.21e-01 | 100.0% | 78.0% |
| 3587052 | 331.2.1.0 ↗ | a+b two layers › TBP-like › Phosphoglucomutase, C-terminal domain › Phosphoglucomutase, C-terminal domain | 0.61 | 34.0 | 3.95e-01 | 80.3% | 74.7% |
| 4027999 | 320.1.1.0 ↗ | a+b two layers › R3H domain-like › R3H domain › R3H domain | 0.60 | 36.0 | 4.24e-01 | 100.0% | 87.1% |
| 5083758 | 12.6.1.4 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Glyco_hydro127M | 0.59 | 35.0 | 4.32e-01 | 84.3% | 100.0% |
| 3275661 | 2007.1.3.0 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like | 0.59 | 37.0 | 3.53e-01 | 95.3% | 54.5% |
| 4967025 | 328.1.1.0 ↗ | a+b two layers › IF3-like › AlbA-like › AlbA-like | 0.58 | 44.0 | 3.99e-01 | 78.0% | 70.3% |
| None | — | 0.57 | 48.0 | 3.82e-01 | 90.6% | 67.5% | |
| 4575751 | 242.1.1.7 ↗ | a+b two layers › Homing endonucleases-like › Homing endonucleases › Homing endonucleases › LAGLIDADG_3 | 0.56 | 31.0 | 3.65e-01 | 100.0% | 75.6% |
| 3683127 | 304.8.1.0 ↗ | a+b two layers › Alpha-beta plaits › ACT-like › ACT-like | 0.56 | 26.0 | 3.71e-01 | 78.0% | 100.0% |
| 3781393 | 4099.1.1.0 ↗ | a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like | 0.54 | 32.0 | 3.77e-01 | 96.9% | 85.7% |
| 3250567 | 331.18.1.4 ↗ | a+b two layers › TBP-like › C-terminal TBP-like domain of Roc › C-terminal TBP-like domain of Roc › COR-B | 0.53 | 45.0 | 4.04e-01 | 92.9% | 66.9% |
| 5036673 | 328.6.1.1 ↗ | a+b two layers › IF3-like › EPT/RTPC-like › EPT/RTPC-like › EPSP_synthase | 0.53 | 47.0 | 3.97e-01 | 100.0% | 91.4% |
| 3399944 | 9.1.1.53 ↗ | beta barrels › Lipocalins/Streptavidin › Lipocalins › Lipocalins › DUF7044 | 0.52 | 28.0 | 3.42e-01 | 88.2% | 82.5% |
| 4991894 | 2003.1.5.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases | 0.52 | 43.0 | 3.99e-01 | 90.6% | 83.6% |
| 3441483 | 5.1.3.68 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF1618 | 0.50 | 42.0 | 3.03e-01 | 89.0% | 86.4% |