←Back to structures

gwf1_scaffold_41_prodigal-single.1__X__X__00439

Bact-Vir

gwf1_scaffold_41_prodigal-single.1__X__X__00439

Identity

Kingdom:
phage

Quality

92.6 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 3-112
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4hcsA00 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 30.0 3.75e-01 83.6% 88.1%
7mdhA02 3.90.110.10 Alpha Beta › Alpha-Beta Complex › L-2-Hydroxyisocaproate Dehydrogenase; Chain A, domain 2 › Lactate dehydrogenase/glycoside hydrolase, family 4, C-terminal 0.52 42.0 3.68e-01 89.1% 90.2%
2sfaA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.50 39.0 4.31e-01 92.7% 100.0%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3387119 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.69 51.0 5.54e-01 90.9% 93.3%
3562168 4.1.1.9 ↗ beta barrels › SH3 › SH3 › SH3 › TUDOR 0.66 40.0 4.35e-01 70.0% 73.3%
4010681 4.31.1.1 ↗ beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL 0.63 49.0 5.26e-01 94.5% 97.9%
3174977 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.59 47.0 5.06e-01 92.7% 100.0%
3715175 4.18.1.0 ↗ beta barrels › SH3 › Plus3 › Plus3 0.57 44.0 3.85e-01 83.6% 76.6%
5075528 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.53 33.0 3.66e-01 82.7% 77.8%
3683031 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.51 31.0 3.59e-01 90.0% 88.0%