Back to structures

gwf1_scaffold_9_prodigal-single.1__X__X__00001

Bact-Vir

gwf1_scaffold_9_prodigal-single.1__X__X__00001

Identity

Kingdom:
phage

Quality

86.4 mean pLDDT

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 21-126
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25788.3 best Ig_Rha78A_N 33.1 7.80e-08 92.5% 85.7%
D2 high residues 136-236
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25788.3 best Ig_Rha78A_N 45.2 1.30e-11 92.1% 81.0%
D3 high residues 245-347
PDB
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF25788.3 best Ig_Rha78A_N 36.9 4.90e-09 96.1% 81.0%
D4 medium residues 355-405
PDB
Domain cluster: representative
CATH (3)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3vvvA00 2.60.40.2840 Mainly Beta › Sandwich › Immunoglobulin-like › 0.59 49.0 3.90e-01 98.0% 44.4%
2a74A06 6.20.50.160 Special › Other non-globular › N-terminal domain of TfIIb › 0.59 44.0 4.19e-01 100.0% 68.8%
3uezC02 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 41.0 3.58e-01 94.1% 97.6%
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3976351 219.1.1.40 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › AmiA-like 0.54 38.0 2.58e-01 80.4% 78.2%