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gwf2_scaffold_96_prodigal-single.1__X__X__00080
Bact-Virgwf2_scaffold_96_prodigal-single.1__X__X__00080
Identity
- Kingdom:
- phage
Quality
79.9
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-126
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_30711_prodigal-single.1__X__X__00446__D2-155
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF22547.3 best | 2H-SAK | 27.4 | 4.90e-06 | 67.2% | 70.2% |
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.53 | 24.0 | 3.21e-01 | 97.6% | 85.7% |
| 2it1A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.52 | 24.0 | 3.18e-01 | 99.2% | 83.6% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3396124 | 708.1.2.0 ↗ | beta complex topology › ETN0001 domain-like › ETN0001 domain-like › Mss4-like | 0.61 | 30.0 | 3.44e-01 | 96.0% | 61.1% |
| 3189510 | 243.3.1.0 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin | 0.52 | 27.0 | 3.49e-01 | 73.6% | 98.3% |
D2
medium
residues 131-192