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gwf2_scaffold_96_prodigal-single.1__X__X__00158
Bact-Virgwf2_scaffold_96_prodigal-single.1__X__X__00158
Identity
- Kingdom:
- phage
Quality
91.6
mean pLDDT
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-84_215-257
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1b34B00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.53 | 26.0 | 3.35e-01 | 94.4% | 79.7% |
| 1b63A01 | 3.30.565.10 | Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain | 0.50 | 36.0 | 3.06e-01 | 75.2% | 90.7% |
ECOD (11)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5000698 | 604.38.1.0 ↗ | alpha bundles › Spectrin repeat-like › Legionella effector SdeA 3-helical bundle › Legionella effector SdeA 3-helical bundle | 0.60 | 34.0 | 3.72e-01 | 78.4% | 65.7% |
| 4962910 | 5069.1.3.0 ↗ | alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Fumarate reductase respiratory complex transmembrane subunits | 0.59 | 43.0 | 4.26e-01 | 76.8% | 85.2% |
| 3695830 | 633.24.1.7 ↗ | alpha bundles › Bromodomain-like › RABEX-5 helical domain › RABEX-5 helical domain › TMD_POM152 | 0.58 | 32.0 | 3.82e-01 | 94.4% | 80.0% |
| 1174795 | 3650.1.1.1 ↗ | alpha arrays › C-terminal domain of Lmo2642 protein › C-terminal domain of Lmo2642 protein › C-terminal domain of Lmo2642 protein › CNP_C_terminal | 0.57 | 34.0 | 3.62e-01 | 97.6% | 66.4% |
| 1489431 | 3576.1.1.0 ↗ | a+b complex topology › Cas8-like › Cascade subunit CasA/Cse1/Cas8 › Cascade subunit CasA/Cse1/Cas8 | 0.57 | 40.0 | 2.63e-01 | 72.8% | 40.0% |
| 3175684 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.55 | 44.0 | 2.97e-01 | 86.4% | 81.3% |
| 4031352 | 6026.1.1.43 ↗ | alpha duplicates or obligate multimers › cwf21 domain › cwf21 domain › cwf21 domain › DUF1024 | 0.53 | 34.0 | 4.12e-01 | 100.0% | 98.8% |
| 3505182 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 29.0 | 3.48e-01 | 94.4% | 83.7% |
| 4009147 | 2.1.1.292 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF30365 | 0.52 | 46.0 | 3.79e-01 | 100.0% | 91.7% |
| 3305975 | 109.4.1.420 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR | 0.52 | 29.0 | 2.82e-01 | 100.0% | 48.9% |
| 3194226 | 12.6.1.3 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycoside hydrolase family 127 middle domain-related › Glycoside hydrolase family 127 middle domain-related › Bac_rhamnosid_C | 0.51 | 21.0 | 3.07e-01 | 84.0% | 90.0% |
D2
medium
residues 87-102_158-213
Domain cluster:
rep: LacPavin_0818_WC45_scaffold_160996_curated_closed_complete_prodigal-single.1__X__X__00767__D222-304
CATH (59)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2mysA01 | 2.30.30.360 | Mainly Beta › Roll › SH3 type barrels. › Myosin S1 fragment, N-terminal | 0.86 | 54.0 | 6.54e-01 | 94.4% | 95.8% |
| 2xk0A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.86 | 58.0 | 5.93e-01 | 100.0% | 72.5% |
| 2eqjA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.85 | 59.0 | 6.20e-01 | 100.0% | 78.8% |
| 5kcoA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.84 | 57.0 | 6.30e-01 | 95.8% | 86.4% |
| 4n4iA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 56.0 | 5.15e-01 | 97.2% | 55.6% |
| 2digA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 58.0 | 6.04e-01 | 100.0% | 77.9% |
| 4ii1A02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.83 | 57.0 | 6.37e-01 | 98.6% | 91.1% |
| 2heqA01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.79 | 57.0 | 6.45e-01 | 93.1% | 100.0% |
| 2ldmA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 53.0 | 5.98e-01 | 98.6% | 94.3% |
| 3j7aF03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.78 | 62.0 | 6.27e-01 | 100.0% | 85.9% |
| 2gfaB01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 59.0 | 6.31e-01 | 100.0% | 93.5% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 63.0 | 6.39e-01 | 100.0% | 87.5% |
| 6az1E03 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 62.0 | 6.27e-01 | 100.0% | 86.1% |
| 3oymA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.77 | 57.0 | 5.84e-01 | 98.6% | 80.0% |
| 2ct4A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.76 | 60.0 | 6.08e-01 | 95.8% | 85.7% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 58.0 | 6.18e-01 | 97.2% | 93.5% |
| 2l89A00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 61.0 | 5.26e-01 | 100.0% | 58.3% |
| 2jxbA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 55.0 | 5.20e-01 | 95.8% | 66.3% |
| 2akkA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.74 | 58.0 | 5.79e-01 | 100.0% | 82.4% |
| 1jegA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.73 | 56.0 | 6.05e-01 | 97.2% | 100.0% |
| 2dl5A00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 58.0 | 5.70e-01 | 100.0% | 80.8% |
| 2v1rA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 60.0 | 6.18e-01 | 95.8% | 95.5% |
| 3upuA03 | 2.30.30.780 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 63.0 | 5.16e-01 | 97.2% | 96.9% |
| 2vknA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.72 | 57.0 | 5.91e-01 | 98.6% | 92.4% |
| 1ssfA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 50.0 | 5.57e-01 | 100.0% | 98.2% |
| 3urgA02 | 2.30.30.530 | Mainly Beta › Roll › SH3 type barrels. › Calcium binding protein CcbP, beta-barrel domain | 0.70 | 56.0 | 5.93e-01 | 98.6% | 96.8% |
| 3npfB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 59.0 | 6.14e-01 | 98.6% | 100.0% |
| 4p5nA00 | 2.30.30.1060 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 57.0 | 5.72e-01 | 100.0% | 86.5% |
| 7z0kB01 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.69 | 55.0 | 5.79e-01 | 95.8% | 96.9% |
| 1e0bA00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.68 | 46.0 | 4.98e-01 | 87.5% | 82.0% |
| 2e5wA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.67 | 44.0 | 4.93e-01 | 87.5% | 87.5% |
| 2hbpA00 | 2.30.30.700 | Mainly Beta › Roll › SH3 type barrels. › SLA1 homology domain 1 | 0.67 | 46.0 | 4.77e-01 | 95.8% | 77.3% |
| 4krtB03 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.66 | 56.0 | 5.85e-01 | 93.1% | 100.0% |
| 2xgjA05 | 2.40.30.300 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.66 | 59.0 | 4.83e-01 | 98.6% | 75.4% |
| 3c6kA02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.65 | 43.0 | 4.77e-01 | 87.5% | 87.5% |
| 1iy9A02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.65 | 42.0 | 4.83e-01 | 86.1% | 92.3% |
| 2k57A00 | 2.30.30.100 | Mainly Beta › Roll › SH3 type barrels. › | 0.64 | 43.0 | 4.75e-01 | 95.8% | 90.9% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.63 | 58.0 | 5.25e-01 | 100.0% | 86.3% |
| 1u7iA02 | 3.30.720.110 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.63 | 34.0 | 3.69e-01 | 83.3% | 62.3% |
| 3pfsB00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.63 | 58.0 | 4.69e-01 | 100.0% | 64.6% |
| 5dm6H00 | 2.40.150.20 | Mainly Beta › Beta Barrel › Ribosomal Protein L14 › Ribosomal protein L14/L23 | 0.63 | 57.0 | 4.55e-01 | 98.6% | 70.1% |
| 1z47A03 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.62 | 39.0 | 4.68e-01 | 88.9% | 93.9% |
| 1oqkA00 | 2.30.30.210 | Mainly Beta › Roll › SH3 type barrels. › Ribonuclease P/MRP, subunit p29 | 0.61 | 47.0 | 4.65e-01 | 100.0% | 76.9% |
| 1m1fB00 | 2.30.30.110 | Mainly Beta › Roll › SH3 type barrels. › | 0.61 | 55.0 | 4.82e-01 | 100.0% | 81.9% |
| 2o07A01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 43.0 | 4.66e-01 | 94.4% | 91.5% |
| 6jy5B00 | 2.40.50.220 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › EutN/Ccml | 0.60 | 41.0 | 3.98e-01 | 72.2% | 93.9% |
| 1inlC02 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.60 | 40.0 | 4.20e-01 | 88.9% | 78.1% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 48.0 | 4.75e-01 | 100.0% | 83.1% |
| 6p3qA02 | 3.90.70.10 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases | 0.58 | 51.0 | 3.99e-01 | 100.0% | 76.6% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 40.0 | 4.13e-01 | 86.1% | 77.6% |
| 6ruiB07 | 2.40.50.150 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II, Rpb2 subunit, wall domain | 0.56 | 42.0 | 3.50e-01 | 80.6% | 51.6% |
| 3e4wA02 | 2.40.180.10 | Mainly Beta › Beta Barrel › Catalase HpII, Chain A, domain 1 › Catalase core domain | 0.56 | 47.0 | 3.50e-01 | 98.6% | 84.1% |
| 2b2cA01 | 2.30.140.10 | Mainly Beta › Roll › Spermidine Synthase; Chain: A, domain 2 › Spermidine synthase, tetramerisation domain | 0.56 | 43.0 | 4.51e-01 | 94.4% | 92.2% |
| 1icwB00 | 2.40.50.40 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › | 0.55 | 40.0 | 4.22e-01 | 83.3% | 86.4% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.54 | 42.0 | 4.25e-01 | 91.7% | 83.1% |
| 2ml5A00 | 3.10.450.410 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.52 | 36.0 | 2.84e-01 | 72.2% | 63.2% |
| 3nqkA02 | 2.40.128.440 | Mainly Beta › Beta Barrel › Lipocalin › Uncharacterised protein PF14274, DUF4361 | 0.51 | 38.0 | 3.07e-01 | 83.3% | 91.3% |
| 5b0hA00 | 2.70.70.10 | Mainly Beta › Distorted Sandwich › Glucose Permease (Domain IIA) › Glucose Permease (Domain IIA) | 0.51 | 40.0 | 3.40e-01 | 90.3% | 73.7% |
| 1tsjA00 | 3.10.180.10 | Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 | 0.51 | 36.0 | 3.08e-01 | 75.0% | 95.7% |
ECOD (87)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3609597 | 4.1.1.236 ↗ | beta barrels › SH3 › SH3 › SH3 › KOWx_SPT5 | 0.91 | 58.0 | 6.34e-01 | 100.0% | 78.3% |
| 3428486 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.90 | 61.0 | 5.82e-01 | 100.0% | 62.5% |
| 4321173 | 4.1.1.98 ↗ | beta barrels › SH3 › SH3 › SH3 › ProQ_C | 0.90 | 59.0 | 6.59e-01 | 100.0% | 84.5% |
| 3817476 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.89 | 60.0 | 7.24e-01 | 100.0% | 100.0% |
| 4605602 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.89 | 64.0 | 6.80e-01 | 98.6% | 83.1% |
| 4998329 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.89 | 57.0 | 6.47e-01 | 100.0% | 85.5% |
| 3649741 | 4.1.1.33 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_N | 0.89 | 60.0 | 5.92e-01 | 100.0% | 66.7% |
| 3264879 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.89 | 62.0 | 6.32e-01 | 100.0% | 74.3% |
| 3584571 | 4.1.1.56 ↗ | beta barrels › SH3 › SH3 › SH3 › RBB1NT | 0.88 | 60.0 | 4.06e-01 | 100.0% | 21.7% |
| 3764432 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 60.0 | 6.34e-01 | 100.0% | 78.5% |
| 3741680 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.88 | 64.0 | 7.33e-01 | 100.0% | 100.0% |
| 4161673 | 4.1.1.105 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF5604 | 0.87 | 63.0 | 5.90e-01 | 100.0% | 63.5% |
| 3420348 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.86 | 58.0 | 6.62e-01 | 100.0% | 90.9% |
| 3419491 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.86 | 65.0 | 7.16e-01 | 100.0% | 95.0% |
| 3917372 | 4.1.1.101 ↗ | beta barrels › SH3 › SH3 › SH3 › Tudor_2 | 0.85 | 61.0 | 6.07e-01 | 100.0% | 72.0% |
| 3299797 | 4.1.1.306 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_VIII-1_N | 0.84 | 56.0 | 6.11e-01 | 98.6% | 81.7% |
| 4025829 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 59.0 | 6.61e-01 | 97.2% | 94.5% |
| 5026824 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 66.0 | 6.71e-01 | 100.0% | 84.3% |
| 3660358 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.83 | 61.0 | 6.63e-01 | 100.0% | 91.7% |
| 3702915 | 4.1.1.1 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1 | 0.82 | 63.0 | 6.86e-01 | 95.8% | 96.7% |
| 3478898 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 59.0 | 6.20e-01 | 100.0% | 83.1% |
| 4271974 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.82 | 64.0 | 6.74e-01 | 100.0% | 92.2% |
| 3591224 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 54.0 | 6.41e-01 | 95.8% | 100.0% |
| 3502290 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 59.0 | 6.45e-01 | 100.0% | 91.7% |
| 5043533 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.81 | 65.0 | 6.94e-01 | 100.0% | 95.3% |
| 4971532 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.80 | 64.0 | 6.52e-01 | 100.0% | 87.1% |
| 4215717 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 65.0 | 6.69e-01 | 100.0% | 91.3% |
| 4593997 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 62.0 | 6.49e-01 | 97.2% | 90.8% |
| 3513923 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 61.0 | 6.10e-01 | 97.2% | 78.7% |
| 4241924 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.79 | 62.0 | 5.68e-01 | 97.2% | 65.6% |
| 4629735 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 61.0 | 6.47e-01 | 97.2% | 90.8% |
| 3886492 | 4.1.1.154 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4772 | 0.79 | 65.0 | 6.45e-01 | 100.0% | 84.0% |
| 5031165 | 4.1.1.93 ↗ | beta barrels › SH3 › SH3 › SH3 › 40S_S4_C | 0.79 | 65.0 | 6.60e-01 | 100.0% | 90.0% |
| 5022848 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 61.0 | 6.68e-01 | 95.8% | 98.3% |
| 4943273 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 66.0 | 6.92e-01 | 100.0% | 98.5% |
| 4128902 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.78 | 50.0 | 5.83e-01 | 95.8% | 94.0% |
| 4376886 | 4.1.1.241 ↗ | beta barrels › SH3 › SH3 › SH3 › NifZ | 0.78 | 73.0 | 7.02e-01 | 100.0% | 91.3% |
| 4120629 | 4.1.1.97 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF150_C | 0.77 | 61.0 | 6.01e-01 | 100.0% | 80.0% |
| 5052256 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 64.0 | 5.78e-01 | 100.0% | 67.4% |
| 3597255 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.77 | 61.0 | 5.71e-01 | 97.2% | 70.6% |
| 3901117 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.77 | 62.0 | 4.47e-01 | 100.0% | 33.9% |
| 5075469 | 4.1.1.3 ↗ | beta barrels › SH3 › SH3 › SH3 › KOW | 0.77 | 62.0 | 6.50e-01 | 100.0% | 95.4% |
| 4001172 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.76 | 61.0 | 6.18e-01 | 97.2% | 87.1% |
| 3559960 | 2006.1.6.66 ↗ | a/b three-layered sandwiches › HAD domain-like › HAD domain-related › vWA-like › DUF4537 | 0.76 | 60.0 | 6.15e-01 | 100.0% | 85.7% |
| 1821014 | 4.1.1.70 ↗ | beta barrels › SH3 › SH3 › SH3 › Tsr0524-like | 0.75 | 63.0 | 6.61e-01 | 100.0% | 100.0% |
| 3242957 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 70.0 | 5.40e-01 | 100.0% | 73.8% |
| 3563220 | 4.1.1.220 ↗ | beta barrels › SH3 › SH3 › SH3 › BAHCC1-like_Tudor | 0.75 | 58.0 | 5.60e-01 | 100.0% | 73.8% |
| 3255737 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.74 | 68.0 | 5.60e-01 | 98.6% | 70.8% |
| 3443078 | 4.1.1.330 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O, SH3-C_UBE2O | 0.73 | 62.0 | 4.51e-01 | 100.0% | 36.6% |
| 3991065 | 4.1.1.334 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_1, SH3_2 | 0.73 | 65.0 | 6.30e-01 | 97.2% | 92.5% |
| 4961854 | 4.1.1.492 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26460 | 0.73 | 67.0 | 6.61e-01 | 100.0% | 94.7% |
| 3691144 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.72 | 63.0 | 6.45e-01 | 100.0% | 97.1% |
| 3723061 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 67.0 | 5.32e-01 | 100.0% | 71.9% |
| 3723834 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 63.0 | 6.44e-01 | 100.0% | 97.1% |
| 3183093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 65.0 | 5.19e-01 | 100.0% | 53.6% |
| 4172306 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.71 | 56.0 | 5.05e-01 | 100.0% | 63.2% |
| 3696171 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 66.0 | 4.06e-01 | 100.0% | 33.5% |
| 3610097 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.71 | 65.0 | 5.16e-01 | 100.0% | 78.6% |
| 3761318 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.71 | 57.0 | 5.84e-01 | 100.0% | 88.6% |
| 3594062 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 64.0 | 5.04e-01 | 100.0% | 78.6% |
| 5057445 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.70 | 51.0 | 4.83e-01 | 100.0% | 64.7% |
| 3451280 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.70 | 64.0 | 4.90e-01 | 100.0% | 60.0% |
| 3995431 | 4.1.1.92 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_9 | 0.69 | 60.0 | 5.92e-01 | 98.6% | 90.7% |
| 5065841 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.69 | 53.0 | 5.05e-01 | 100.0% | 70.2% |
| 3245032 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.68 | 62.0 | 6.16e-01 | 98.6% | 94.7% |
| 3187511 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.67 | 61.0 | 4.94e-01 | 100.0% | 74.6% |
| 5062120 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.67 | 59.0 | 5.23e-01 | 100.0% | 72.4% |
| 3738927 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.66 | 60.0 | 4.98e-01 | 100.0% | 72.8% |
| 3612351 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.66 | 59.0 | 5.88e-01 | 98.6% | 96.0% |
| 3411858 | 4.1.1.456 ↗ | beta barrels › SH3 › SH3 › SH3 › BAH, BAHCC1-like_Tudor, SH3_TNRC18 | 0.64 | 57.0 | 3.48e-01 | 100.0% | 16.4% |
| 4542692 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 56.0 | 5.30e-01 | 98.6% | 87.1% |
| 4029955 | 4.1.1.85 ↗ | beta barrels › SH3 › SH3 › SH3 › MTR4_beta-barrel | 0.63 | 57.0 | 4.55e-01 | 100.0% | 75.0% |
| 3214694 | 4.1.1.331 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4708 | 0.62 | 57.0 | 5.00e-01 | 100.0% | 94.3% |
| 4015397 | 4.1.1.72 ↗ | beta barrels › SH3 › SH3 › SH3 › Hva1_TUDOR | 0.62 | 46.0 | 5.08e-01 | 80.6% | 95.0% |
| 3679362 | 4.1.1.351 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_ISE2 | 0.61 | 54.0 | 5.14e-01 | 97.2% | 98.8% |
| 3811908 | 4111.1.1.2 ↗ | a+b two layers › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › AF0104/ALDC/Ptd012-like › PCC | 0.61 | 54.0 | 4.38e-01 | 100.0% | 66.4% |
| 4097002 | 2.1.1.48 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › Elong-fact-P_C | 0.60 | 35.0 | 3.82e-01 | 73.6% | 71.2% |
| 3770803 | 4.1.1.248 ↗ | beta barrels › SH3 › SH3 › SH3 › CABIT | 0.60 | 51.0 | 4.55e-01 | 100.0% | 68.2% |
| 3507601 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.59 | 46.0 | 4.14e-01 | 88.9% | 99.0% |
| 3701280 | 5.1.4.313 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_BBS7 | 0.57 | 48.0 | 3.12e-01 | 94.4% | 22.7% |
| 3601975 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 48.0 | 3.08e-01 | 94.4% | 21.4% |
| 4978132 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.57 | 50.0 | 4.21e-01 | 100.0% | 78.4% |
| 3452266 | 4.1.1.298 ↗ | beta barrels › SH3 › SH3 › SH3 › PF26133 | 0.55 | 49.0 | 4.91e-01 | 100.0% | 98.7% |
| 4977702 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.52 | 40.0 | 3.83e-01 | 84.7% | 92.9% |
| 4301874 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.51 | 44.0 | 2.75e-01 | 94.4% | 21.8% |
| 5046193 | 4.7.1.1 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 › RNase_P-MRP_p29 | 0.51 | 41.0 | 3.79e-01 | 86.1% | 88.9% |
| 3937247 | 10.13.1.1 ↗ | beta sandwiches › jelly-roll › Calcium ATPase, transduction domain A › Calcium ATPase, transduction domain A › E1-E2_ATPase | 0.50 | 42.0 | 3.30e-01 | 97.2% | 87.3% |
D3
medium
residues 103-157
Domain cluster:
rep: LacPavin_0818_WC40_scaffold_15340_prodigal-single.1__X__X__00357__D6-59
CATH (3)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2bx9A00 | 6.20.20.10 | Special › Other non-globular › Chaperone, DNAj Protein; Chain A › | 0.71 | 54.0 | 5.48e-01 | 94.5% | 83.0% |
| 1exkA00 | 2.10.230.10 | Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain | 0.68 | 61.0 | 5.39e-01 | 100.0% | 83.5% |
| 2cttA01 | 2.10.230.10 | Mainly Beta › Ribbon › Chaperone, DNAj Protein; Chain A › Heat shock protein DnaJ, cysteine-rich domain | 0.67 | 48.0 | 4.52e-01 | 78.2% | 73.9% |
ECOD (33)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4024146 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.85 | 61.0 | 6.38e-01 | 74.5% | 98.0% |
| 4060106 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.85 | 58.0 | 6.73e-01 | 70.9% | 100.0% |
| 4653582 | 361.1.1.14 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › PF30758 | 0.85 | 62.0 | 5.48e-01 | 76.4% | 74.7% |
| 3816662 | 361.1.1.18 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › zf-AtTam37 | 0.83 | 61.0 | 6.12e-01 | 76.4% | 83.6% |
| 3253984 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.83 | 60.0 | 5.52e-01 | 80.0% | 60.0% |
| 3814464 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.83 | 61.0 | 5.11e-01 | 78.2% | 48.9% |
| 3654474 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.82 | 59.0 | 5.06e-01 | 76.4% | 83.5% |
| 3318682 | 361.1.1.4 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DUF5351 | 0.82 | 59.0 | 5.59e-01 | 76.4% | 70.8% |
| 4341103 | 67.1.1.4 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C | 0.82 | 52.0 | 4.03e-01 | 72.7% | 32.7% |
| 3314149 | 361.1.1.15 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › PF28694 | 0.81 | 55.0 | 6.07e-01 | 70.9% | 91.1% |
| 4976959 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.80 | 63.0 | 5.66e-01 | 83.6% | 77.3% |
| 5042568 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.80 | 57.0 | 5.76e-01 | 74.5% | 89.1% |
| 3245954 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.79 | 61.0 | 5.61e-01 | 81.8% | 77.1% |
| 3763851 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.79 | 59.0 | 5.15e-01 | 78.2% | 78.8% |
| 4351918 | 67.1.1.4 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C | 0.79 | 61.0 | 4.24e-01 | 81.8% | 31.2% |
| 4220475 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.79 | 63.0 | 5.59e-01 | 83.6% | 77.3% |
| 3815072 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.79 | 55.0 | 5.52e-01 | 72.7% | 85.5% |
| 3630008 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.78 | 59.0 | 5.65e-01 | 80.0% | 76.2% |
| 4466486 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.78 | 61.0 | 5.55e-01 | 81.8% | 81.4% |
| 3706455 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.78 | 60.0 | 4.70e-01 | 81.8% | 52.7% |
| 4317359 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.78 | 51.0 | 3.92e-01 | 72.7% | 32.2% |
| 3930601 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.78 | 59.0 | 4.75e-01 | 80.0% | 90.0% |
| 5052173 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.77 | 67.0 | 5.99e-01 | 94.5% | 86.7% |
| 3702888 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.77 | 59.0 | 5.27e-01 | 81.8% | 70.7% |
| 4162763 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.76 | 58.0 | 5.36e-01 | 81.8% | 81.4% |
| 3598905 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.75 | 59.0 | 5.36e-01 | 81.8% | 75.7% |
| 3170179 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.74 | 58.0 | 4.96e-01 | 81.8% | 80.0% |
| 4592703 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.71 | 66.0 | 6.62e-01 | 100.0% | 100.0% |
| 3463007 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.71 | 55.0 | 5.37e-01 | 83.6% | 86.7% |
| 4080896 | 67.1.1.4 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_CXXCXGXG, DnaJ_C | 0.68 | 62.0 | 4.41e-01 | 100.0% | 44.5% |
| 4250770 | 361.1.1.1 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ_CXXCXGXG | 0.67 | 61.0 | 5.63e-01 | 100.0% | 94.3% |
| 4168529 | 67.1.1.1 ↗ | beta sandwiches › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › HSP40/DnaJ peptide-binding domain › DnaJ_C | 0.67 | 54.0 | 4.13e-01 | 85.5% | 66.1% |
| 5024135 | 361.1.1.0 ↗ | few secondary structure elements › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain › DnaJ/Hsp40 cysteine-rich domain | 0.61 | 49.0 | 4.96e-01 | 94.5% | 81.8% |