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gwf2_scaffold_96_prodigal-single.1__X__X__00196
Bact-Virgwf2_scaffold_96_prodigal-single.1__X__X__00196
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-69
Domain cluster:
representative
CATH (25)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3loiA01 | 2.60.120.10 | Mainly Beta › Sandwich › Jelly Rolls › Jelly Rolls | 0.67 | 44.0 | 3.27e-01 | 95.6% | 28.7% |
| 4a4yA01 | 2.60.200.50 | Mainly Beta › Sandwich › Tumour Suppressor Smad4 › | 0.65 | 56.0 | 4.96e-01 | 95.6% | 98.0% |
| 2kw4A00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.61 | 48.0 | 3.84e-01 | 88.2% | 83.0% |
| 4obiA00 | 2.60.320.10 | Mainly Beta › Sandwich › mini-chromosome maintenance (MCM) complex, domain 2 › N-utilization substance G protein NusG, insert domain | 0.61 | 49.0 | 4.62e-01 | 94.1% | 100.0% |
| 1r5tA00 | 3.40.140.10 | Alpha Beta › 3-Layer(aba) Sandwich › Cytidine Deaminase; domain 2 › Cytidine Deaminase, domain 2 | 0.60 | 47.0 | 3.68e-01 | 95.6% | 40.4% |
| 6julA02 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.59 | 49.0 | 4.33e-01 | 100.0% | 63.5% |
| 1u8sA01 | 3.30.70.260 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain | 0.57 | 52.0 | 4.78e-01 | 100.0% | 95.3% |
| 2ffgA00 | 3.30.720.20 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › Protein of unknown function DUF1797 | 0.57 | 43.0 | 4.10e-01 | 82.4% | 85.0% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.57 | 32.0 | 3.28e-01 | 80.9% | 55.2% |
| 1ukfA00 | 3.90.70.20 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.56 | 48.0 | 3.60e-01 | 100.0% | 37.8% |
| 6z9cA01 | 2.60.40.1470 | Mainly Beta › Sandwich › Immunoglobulin-like › ApaG domain | 0.56 | 45.0 | 3.84e-01 | 92.6% | 99.2% |
| 3f6zB01 | 2.40.128.200 | Mainly Beta › Beta Barrel › Lipocalin › C-type lysozyme inhibitor | 0.55 | 43.0 | 4.20e-01 | 89.7% | 97.5% |
| 1et9A01 | 3.10.20.120 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.55 | 38.0 | 3.27e-01 | 91.2% | 45.5% |
| 5ih0A01 | 3.30.200.20 | Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 | 0.54 | 37.0 | 3.39e-01 | 70.6% | 95.7% |
| 4hhvA00 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.53 | 33.0 | 2.99e-01 | 72.1% | 42.7% |
| 2j7qA00 | 3.90.70.120 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.52 | 46.0 | 3.22e-01 | 100.0% | 30.7% |
| 3qnfC01 | 2.60.40.1730 | Mainly Beta › Sandwich › Immunoglobulin-like › tricorn interacting facor f3 domain | 0.52 | 39.0 | 2.88e-01 | 82.4% | 95.6% |
| 3bv8A00 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 44.0 | 4.12e-01 | 100.0% | 75.3% |
| 2jfdA03 | 3.30.70.250 | Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › Malonyl-CoA ACP transacylase, ACP-binding | 0.52 | 43.0 | 4.40e-01 | 95.6% | 93.9% |
| 6fijA02 | 3.40.366.10 | Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › Malonyl-Coenzyme A Acyl Carrier Protein, domain 2 | 0.52 | 46.0 | 2.97e-01 | 100.0% | 24.6% |
| 2lg1A02 | 2.30.29.30 | Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) | 0.52 | 42.0 | 3.61e-01 | 92.6% | 75.7% |
| 5suvC00 | 3.90.470.20 | Alpha Beta › Alpha-Beta Complex › Ribosomal Protein L22; Chain A › 4'-phosphopantetheinyl transferase domain | 0.52 | 39.0 | 3.30e-01 | 83.8% | 91.2% |
| 4dxkA01 | 3.30.390.10 | Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › Enolase-like, N-terminal domain | 0.52 | 43.0 | 3.63e-01 | 97.1% | 96.8% |
| 1rh8A00 | 2.60.40.150 | Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain | 0.51 | 45.0 | 3.58e-01 | 100.0% | 48.6% |
| 1vw4X00 | 2.20.28.120 | Mainly Beta › Single Sheet › Rubrerythrin, domain 2 › Ribosomal protein L33 | 0.51 | 36.0 | 3.69e-01 | 91.2% | 78.1% |
ECOD (22)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5038652 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.72 | 48.0 | 4.13e-01 | 95.6% | 44.8% |
| 3768329 | 220.1.1.0 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like | 0.63 | 37.0 | 3.07e-01 | 82.4% | 32.0% |
| 3881277 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.63 | 50.0 | 4.41e-01 | 100.0% | 59.0% |
| 3261558 | 10.37.1.0 ↗ | beta sandwiches › jelly-roll › TerD › TerD | 0.63 | 52.0 | 4.04e-01 | 100.0% | 42.7% |
| 1144694 | 714.1.1.1 ↗ | beta sandwiches › N-utilization substance G protein NusG, insert domain › N-utilization substance G protein NusG, insert domain › N-utilization substance G protein NusG, insert domain › NusG_II | 0.61 | 49.0 | 4.62e-01 | 94.1% | 100.0% |
| 3385468 | 3019.1.1.0 ↗ | beta sandwiches › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain › gp11/flagellar cap protein FliD insertion domain | 0.55 | 46.0 | 3.29e-01 | 95.6% | 63.2% |
| 4003943 | 883.1.1.0 ↗ | a+b complex topology › Aha1/BPI domain-like › Aha1/BPI domain-like › Aha1/BPI domain-like | 0.55 | 37.0 | 2.98e-01 | 70.6% | 78.7% |
| 4938899 | 11.1.1.1424 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DUF7490 | 0.54 | 47.0 | 3.76e-01 | 95.6% | 60.8% |
| 4241460 | 301.1.1.2 ↗ | a+b three layers › Bacillus chorismate mutase-like › L30e-like › L30e-like › eRF1_3 | 0.53 | 44.0 | 3.57e-01 | 100.0% | 46.7% |
| 2983288 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.53 | 36.0 | 3.35e-01 | 70.6% | 53.9% |
| 3654790 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.53 | 36.0 | 3.79e-01 | 72.1% | 83.3% |
| 1292509 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.52 | 42.0 | 3.62e-01 | 92.6% | 73.1% |
| 4977860 | 2002.1.1.0 ↗ | a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels | 0.52 | 40.0 | 2.52e-01 | 85.3% | 30.7% |
| 3919705 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.52 | 40.0 | 2.56e-01 | 92.6% | 21.6% |
| 3958402 | 304.11.1.1 ↗ | a+b two layers › Alpha-beta plaits › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Probable ACP-binding domain of malonyl-CoA ACP transacylase › Acyl_transf_1 | 0.51 | 46.0 | 3.54e-01 | 100.0% | 49.3% |
| 3901160 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.51 | 41.0 | 3.09e-01 | 92.6% | 51.4% |
| 3509387 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.51 | 41.0 | 3.53e-01 | 95.6% | 77.5% |
| 3771814 | 220.1.1.47 ↗ | beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 | 0.51 | 39.0 | 3.03e-01 | 91.2% | 50.3% |
| 4983389 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.51 | 34.0 | 3.51e-01 | 70.6% | 73.8% |
| 4654713 | 300.1.1.0 ↗ | a+b three layers › Phospholipase D/nuclease › Phospholipase D/nuclease › Phospholipase D/nuclease | 0.50 | 40.0 | 3.22e-01 | 91.2% | 77.9% |
| 5077687 | 247.1.1.1 ↗ | a+b four layers › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Metallo-hydrolase/oxidoreductase › Lactamase_B | 0.50 | 42.0 | 2.80e-01 | 94.1% | 95.1% |
| 4964413 | 10.1.1.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › Concanavalin A-like lectins/glucanases | 0.50 | 40.0 | 2.94e-01 | 97.1% | 40.0% |