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gwf2_scaffold_96_prodigal-single.1__X__X__00259
Bact-Virgwf2_scaffold_96_prodigal-single.1__X__X__00259
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 3-112
Domain cluster:
rep: JN880423.1__AFJ21461.1__X__00006__D19-112
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF04266.21 best | ASCH | 21.7 | 3.80e-04 | 99.1% | 96.1% |
CATH (18)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1t62B00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.89 | 86.0 | 7.31e-01 | 100.0% | 75.5% |
| 3s9xA00 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.88 | 84.0 | 7.27e-01 | 100.0% | 78.6% |
| 2dp9A01 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.82 | 64.0 | 6.76e-01 | 100.0% | 91.0% |
| 3iuwA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.81 | 52.0 | 6.17e-01 | 98.2% | 91.1% |
| 2kkuA00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.76 | 70.0 | 6.40e-01 | 100.0% | 79.9% |
| 1s04A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.74 | 66.0 | 6.62e-01 | 100.0% | 96.4% |
| 1te7A00 | 2.30.130.30 | Mainly Beta › Roll › Archaeosine Trna-guanine Transglycosylase; Chain: A, domain 4 › Hypothetical protein. | 0.69 | 57.0 | 5.94e-01 | 98.2% | 95.1% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.69 | 35.0 | 4.33e-01 | 80.9% | 76.4% |
| 1i2dA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.62 | 57.0 | 4.74e-01 | 100.0% | 69.1% |
| 1wruA01 | 2.30.300.10 | Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold | 0.62 | 43.0 | 3.65e-01 | 99.1% | 44.6% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.60 | 31.0 | 3.83e-01 | 100.0% | 77.8% |
| 3ammA00 | 2.60.120.180 | Mainly Beta › Sandwich › Jelly Rolls › Glycoside hydrolase family 11/12, catalytic domain | 0.58 | 42.0 | 3.21e-01 | 73.6% | 84.3% |
| 1jhdA02 | 3.10.400.10 | Alpha Beta › Roll › Sulfate adenylyltransferase › Sulfate adenylyltransferase | 0.56 | 50.0 | 4.20e-01 | 100.0% | 67.4% |
| 3f7eA00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 48.0 | 4.58e-01 | 100.0% | 83.6% |
| 3db0B00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 47.0 | 4.60e-01 | 98.2% | 90.3% |
| 5jv4A00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.54 | 47.0 | 4.39e-01 | 99.1% | 91.5% |
| 1b8aA02 | 3.30.930.10 | Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 | 0.52 | 41.0 | 3.02e-01 | 88.2% | 87.4% |
| 2htdB00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.51 | 44.0 | 4.31e-01 | 99.1% | 85.5% |
ECOD (64)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5077279 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.95 | 83.0 | 8.07e-01 | 100.0% | 83.3% |
| 4972120 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.94 | 83.0 | 8.36e-01 | 100.0% | 91.8% |
| 4982523 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.94 | 83.0 | 8.17e-01 | 100.0% | 87.8% |
| 4972117 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.92 | 84.0 | 8.08e-01 | 100.0% | 86.7% |
| 5042221 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.92 | 81.0 | 8.31e-01 | 100.0% | 96.2% |
| 4954540 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.92 | 81.0 | 8.16e-01 | 99.1% | 91.8% |
| 5022429 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.91 | 81.0 | 7.69e-01 | 100.0% | 81.6% |
| 4019865 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.91 | 87.0 | 7.77e-01 | 100.0% | 81.4% |
| 5070577 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.90 | 81.0 | 8.18e-01 | 98.2% | 93.6% |
| 5006048 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.90 | 76.0 | 7.63e-01 | 100.0% | 87.3% |
| 4990496 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.90 | 78.0 | 7.69e-01 | 100.0% | 87.0% |
| 4958692 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.89 | 83.0 | 7.36e-01 | 98.2% | 82.0% |
| 144031 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.88 | 84.0 | 7.27e-01 | 100.0% | 78.6% |
| 4608277 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.88 | 84.0 | 7.84e-01 | 100.0% | 98.5% |
| 3279326 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.88 | 69.0 | 7.61e-01 | 98.2% | 100.0% |
| 4995779 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.88 | 82.0 | 7.31e-01 | 98.2% | 96.6% |
| 5035541 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.87 | 69.0 | 7.37e-01 | 98.2% | 94.7% |
| 4998591 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.87 | 83.0 | 7.40e-01 | 100.0% | 84.8% |
| 177 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.87 | 82.0 | 7.23e-01 | 100.0% | 79.1% |
| 5078127 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.86 | 63.0 | 7.19e-01 | 85.5% | 98.8% |
| 4155252 | 1.1.9.35 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PF30643 | 0.84 | 72.0 | 7.37e-01 | 99.1% | 94.3% |
| 5023996 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.84 | 78.0 | 7.71e-01 | 100.0% | 94.7% |
| 3165125 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.83 | 72.0 | 7.35e-01 | 100.0% | 95.2% |
| 2105336 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.83 | 70.0 | 6.19e-01 | 100.0% | 65.1% |
| 5016521 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.82 | 69.0 | 6.41e-01 | 100.0% | 71.9% |
| 3304930 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.82 | 73.0 | 7.35e-01 | 98.2% | 93.6% |
| 178 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.82 | 64.0 | 6.27e-01 | 100.0% | 75.8% |
| 3653680 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.81 | 75.0 | 6.06e-01 | 100.0% | 55.8% |
| 4229723 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.80 | 68.0 | 6.00e-01 | 100.0% | 64.7% |
| 3817355 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.80 | 74.0 | 6.99e-01 | 100.0% | 83.1% |
| 3944719 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 74.0 | 6.80e-01 | 100.0% | 80.6% |
| 5023730 | 1.1.9.9 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › ASCH | 0.79 | 67.0 | 6.06e-01 | 100.0% | 68.3% |
| 4940646 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.79 | 61.0 | 6.71e-01 | 100.0% | 100.0% |
| 4953076 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.78 | 72.0 | 7.02e-01 | 100.0% | 91.7% |
| 5073325 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.78 | 70.0 | 6.43e-01 | 100.0% | 75.7% |
| 5032181 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.77 | 66.0 | 6.09e-01 | 100.0% | 72.9% |
| 4950776 | 1.1.9.7 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › DUF365 | 0.74 | 68.0 | 6.29e-01 | 100.0% | 82.1% |
| 4999516 | 1.1.9.3 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › EVE | 0.73 | 53.0 | 4.96e-01 | 100.0% | 61.5% |
| 4960614 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.73 | 55.0 | 5.53e-01 | 84.5% | 78.2% |
| 5024536 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.71 | 64.0 | 5.89e-01 | 100.0% | 75.9% |
| 4940359 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.70 | 65.0 | 5.42e-01 | 100.0% | 66.1% |
| 3982237 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.68 | 45.0 | 5.02e-01 | 97.3% | 85.9% |
| 5000162 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.66 | 57.0 | 5.87e-01 | 94.5% | 100.0% |
| 2391027 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.65 | 60.0 | 5.25e-01 | 100.0% | 77.0% |
| 3603513 | 1.1.9.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain | 0.63 | 53.0 | 4.83e-01 | 100.0% | 68.3% |
| 3943170 | 1.1.13.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins | 0.63 | 42.0 | 4.63e-01 | 99.1% | 83.3% |
| 4333010 | 1.1.7.70 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Beta-barrel_GLAA-B_II | 0.63 | 39.0 | 4.65e-01 | 100.0% | 92.0% |
| 4104106 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.62 | 57.0 | 4.85e-01 | 100.0% | 78.3% |
| 4132740 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.61 | 56.0 | 4.88e-01 | 100.0% | 77.6% |
| 4346458 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.61 | 56.0 | 4.71e-01 | 100.0% | 79.4% |
| 4809346 | 1.1.13.57 ↗ | beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins › PF30637 | 0.61 | 44.0 | 4.90e-01 | 98.2% | 96.5% |
| 3184389 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.60 | 32.0 | 2.76e-01 | 79.1% | 33.1% |
| 4996077 | 2003.1.5.66 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 | 0.58 | 45.0 | 3.34e-01 | 85.5% | 69.0% |
| 171 | 1.1.9.16 ↗ | beta barrels › cradle loop barrel › RIFT-related › PUA domain › PUA_2 | 0.56 | 50.0 | 4.35e-01 | 100.0% | 75.1% |
| 5044755 | 1.1.7.28 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › HAS-barrel | 0.55 | 45.0 | 4.35e-01 | 100.0% | 76.0% |
| 3782557 | 278.1.1.1 ↗ | a+b complex topology › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › Succinate dehydrogenase/fumarate reductase flavoprotein, catalytic domain › FAD_binding_2 | 0.55 | 49.0 | 4.29e-01 | 100.0% | 78.8% |
| 1144815 | 4.1.1.103 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_12 | 0.54 | 32.0 | 3.71e-01 | 99.1% | 81.2% |
| 3289825 | 1.1.5.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel | 0.54 | 44.0 | 4.57e-01 | 99.1% | 94.3% |
| 5011628 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.54 | 45.0 | 4.22e-01 | 100.0% | 74.6% |
| 3399868 | 219.1.1.24 ↗ | a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › Herpes_teg_N | 0.53 | 47.0 | 3.68e-01 | 100.0% | 75.0% |
| 5053822 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 43.0 | 4.04e-01 | 100.0% | 75.4% |
| 3574352 | 4.1.1.332 ↗ | beta barrels › SH3 › SH3 › SH3 › Peptidase_C1 | 0.51 | 31.0 | 3.18e-01 | 74.5% | 61.8% |
| 3805525 | 2003.1.5.30 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_7 | 0.50 | 39.0 | 2.77e-01 | 84.5% | 53.0% |
| 3627270 | 11.2.1.32 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › C2 domain › C2 domain › DOCK_N | 0.50 | 36.0 | 2.98e-01 | 75.5% | 95.7% |