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gwf2_scaffold_96_prodigal-single.1__X__X__00298
Bact-Virgwf2_scaffold_96_prodigal-single.1__X__X__00298
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 38-97
Domain cluster:
rep: CAKLQF020000011.1__CAH1085983.1__SAMEA5780031_02231__00031__D106-155
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4b8vA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.88 | 71.0 | 6.79e-01 | 100.0% | 76.1% |
| 5c8qB02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.88 | 63.0 | 7.08e-01 | 81.7% | 97.8% |
| 4b8vA03 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.87 | 64.0 | 7.04e-01 | 85.0% | 95.9% |
| 4b8vA02 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.84 | 66.0 | 6.13e-01 | 90.0% | 68.5% |
| 2djpA00 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.82 | 64.0 | 5.82e-01 | 90.0% | 64.9% |
| 2mtzA01 | 3.10.350.10 | Alpha Beta › Roll › Membrane-bound Lytic Murein Transglycosylase D; Chain A › LysM domain | 0.81 | 58.0 | 6.30e-01 | 85.0% | 92.0% |
| 2gu1A01 | 3.10.450.350 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 56.0 | 4.97e-01 | 100.0% | 88.6% |
| 6dx5A00 | 3.90.70.80 | Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › | 0.63 | 47.0 | 3.42e-01 | 80.0% | 66.3% |
| 3pfyA02 | 6.10.20.180 | Special › Helix non-globular › Arc Repressor Mutant, subunit A › | 0.62 | 43.0 | 4.42e-01 | 71.7% | 93.0% |
| 2vqeM01 | 1.10.8.50 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.57 | 44.0 | 4.30e-01 | 91.7% | 88.7% |
ECOD (81)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5004560 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.95 | 78.0 | 8.17e-01 | 93.3% | 94.5% |
| 3955076 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.94 | 68.0 | 7.75e-01 | 76.7% | 100.0% |
| 3452845 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.93 | 70.0 | 7.32e-01 | 86.7% | 85.5% |
| 2047861 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.93 | 72.0 | 7.37e-01 | 88.3% | 84.5% |
| 3670445 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 76.0 | 4.64e-01 | 93.3% | 16.8% |
| 3426433 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.92 | 72.0 | 7.21e-01 | 88.3% | 81.7% |
| 3458171 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 72.0 | 7.01e-01 | 90.0% | 76.9% |
| 4995817 | 101.15.1.4 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_gp53 | 0.91 | 84.0 | 7.96e-01 | 100.0% | 87.1% |
| 3587382 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 74.0 | 7.73e-01 | 93.3% | 94.5% |
| 4249176 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.91 | 69.0 | 6.94e-01 | 93.3% | 80.0% |
| 4177991 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 73.0 | 7.64e-01 | 93.3% | 94.5% |
| 4205026 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 67.0 | 6.52e-01 | 86.7% | 72.3% |
| 4680476 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.90 | 72.0 | 6.82e-01 | 100.0% | 72.9% |
| 3349612 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.90 | 66.0 | 7.14e-01 | 88.3% | 92.0% |
| 4157099 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.89 | 68.0 | 7.54e-01 | 88.3% | 100.0% |
| 4492966 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 67.0 | 7.03e-01 | 90.0% | 89.1% |
| 4461167 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.87 | 66.0 | 6.44e-01 | 90.0% | 73.8% |
| 3979943 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.87 | 68.0 | 7.47e-01 | 86.7% | 100.0% |
| 3898121 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 67.0 | 7.00e-01 | 90.0% | 89.1% |
| 3969916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 74.0 | 6.98e-01 | 100.0% | 78.6% |
| 3974521 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 72.0 | 7.27e-01 | 95.0% | 88.3% |
| 4404011 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 68.0 | 6.44e-01 | 95.0% | 71.4% |
| 4128043 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 62.0 | 6.99e-01 | 81.7% | 100.0% |
| 3413453 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 64.0 | 6.99e-01 | 85.0% | 94.0% |
| 3320955 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.86 | 68.0 | 6.60e-01 | 90.0% | 76.9% |
| 3353525 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.86 | 65.0 | 5.00e-01 | 90.0% | 38.4% |
| 3720958 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.86 | 66.0 | 7.15e-01 | 90.0% | 98.0% |
| 1758716 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 66.0 | 7.01e-01 | 88.3% | 94.2% |
| 2543722 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.85 | 73.0 | 6.55e-01 | 100.0% | 69.6% |
| 3359799 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.84 | 70.0 | 5.26e-01 | 96.7% | 39.8% |
| 2042916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 67.0 | 7.04e-01 | 95.0% | 94.4% |
| 4022922 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.84 | 64.0 | 6.63e-01 | 90.0% | 87.3% |
| None | — | 0.84 | 69.0 | 5.31e-01 | 96.7% | 42.4% | |
| 3250125 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 67.0 | 6.51e-01 | 88.3% | 78.5% |
| 3691772 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 66.0 | 6.84e-01 | 100.0% | 92.7% |
| 3641672 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.83 | 65.0 | 5.97e-01 | 90.0% | 66.7% |
| 3964920 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 60.0 | 6.14e-01 | 86.7% | 79.3% |
| 2124918 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.83 | 68.0 | 5.12e-01 | 95.0% | 39.0% |
| 1759182 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 63.0 | 6.75e-01 | 88.3% | 96.1% |
| 3303205 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 63.0 | 6.35e-01 | 85.0% | 81.7% |
| 2895417 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.82 | 67.0 | 6.13e-01 | 90.0% | 68.8% |
| 3247196 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.82 | 60.0 | 6.07e-01 | 85.0% | 78.3% |
| 4069716 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.82 | 67.0 | 5.26e-01 | 95.0% | 44.2% |
| 3656643 | 101.15.1.9 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM1_NFP_LYK, LysM2_CERK1_LYK3_4_5 | 0.82 | 68.0 | 5.14e-01 | 95.0% | 40.0% |
| 162111 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.82 | 64.0 | 5.82e-01 | 90.0% | 64.9% |
| 3367888 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.81 | 68.0 | 6.45e-01 | 90.0% | 77.1% |
| 2124917 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 72.0 | 5.07e-01 | 95.0% | 91.9% |
| 3981327 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 65.0 | 6.81e-01 | 86.7% | 96.3% |
| 3188069 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.80 | 64.0 | 6.27e-01 | 85.0% | 78.5% |
| 3666767 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.80 | 64.0 | 5.26e-01 | 88.3% | 49.5% |
| 3654876 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.80 | 66.0 | 4.94e-01 | 88.3% | 40.7% |
| 3183656 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 64.0 | 6.20e-01 | 85.0% | 78.5% |
| 3417561 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 69.0 | 4.32e-01 | 95.0% | 36.6% |
| 3375189 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.79 | 65.0 | 6.22e-01 | 95.0% | 77.1% |
| 3381619 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.79 | 69.0 | 4.31e-01 | 95.0% | 36.9% |
| 3819870 | 101.15.1.6 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_CERK1_LYK3_4_5 | 0.79 | 64.0 | 4.87e-01 | 95.0% | 39.3% |
| 3365578 | 101.15.1.5 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM3_LYK4_5 | 0.78 | 65.0 | 5.89e-01 | 90.0% | 70.0% |
| 3604763 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 58.0 | 5.18e-01 | 88.3% | 56.5% |
| 3711427 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 58.0 | 5.58e-01 | 88.3% | 69.6% |
| 3698672 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.78 | 58.0 | 4.80e-01 | 88.3% | 45.7% |
| 3166029 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.78 | 59.0 | 6.13e-01 | 85.0% | 90.9% |
| 2809236 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.77 | 68.0 | 6.77e-01 | 100.0% | 95.2% |
| 3966498 | 101.15.1.3 ↗ | alpha arrays › HTH › LysM domain › LysM domain › Phage_tail_X | 0.77 | 65.0 | 6.37e-01 | 95.0% | 86.2% |
| 3191428 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.76 | 60.0 | 6.31e-01 | 90.0% | 98.1% |
| 3191020 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.75 | 62.0 | 6.20e-01 | 90.0% | 88.3% |
| 3716764 | 101.15.1.12 ↗ | alpha arrays › HTH › LysM domain › LysM domain › PF30403 | 0.75 | 61.0 | 6.18e-01 | 88.3% | 91.7% |
| 3651054 | 101.15.1.10 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM2_NFP | 0.75 | 65.0 | 4.75e-01 | 95.0% | 42.6% |
| 3989756 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.74 | 56.0 | 6.09e-01 | 81.7% | 100.0% |
| 3611431 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.74 | 61.0 | 6.10e-01 | 90.0% | 93.3% |
| 3337328 | 101.15.1.14 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM, LysM2_CERK1_LYK3_4_5 | 0.73 | 67.0 | 4.24e-01 | 100.0% | 38.0% |
| 3963519 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.73 | 62.0 | 6.08e-01 | 98.3% | 86.2% |
| 4180515 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.73 | 57.0 | 6.00e-01 | 88.3% | 96.3% |
| 3269916 | 101.15.1.1 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM | 0.71 | 54.0 | 5.46e-01 | 85.0% | 83.3% |
| 3261423 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 52.0 | 5.56e-01 | 83.3% | 100.0% |
| 3267280 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 51.0 | 5.45e-01 | 85.0% | 96.0% |
| 4008890 | 101.15.1.0 ↗ | alpha arrays › HTH › LysM domain › LysM domain | 0.70 | 55.0 | 5.71e-01 | 86.7% | 94.5% |
| 3647286 | 101.15.1.7 ↗ | alpha arrays › HTH › LysM domain › LysM domain › LysM_RLK | 0.69 | 59.0 | 5.53e-01 | 96.7% | 81.3% |
| 2740077 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.64 | 55.0 | 4.79e-01 | 100.0% | 80.4% |
| 1649977 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.64 | 56.0 | 4.94e-01 | 100.0% | 86.7% |
| 3164837 | 101.15.1.2 ↗ | alpha arrays › HTH › LysM domain › LysM domain › OapA | 0.61 | 53.0 | 4.86e-01 | 100.0% | 92.5% |
| 4956874 | 101.1.2.31 ↗ | alpha arrays › HTH › HTH › winged helix domain › TFIIE_alpha | 0.57 | 40.0 | 3.53e-01 | 76.7% | 70.5% |