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gwf2_scaffold_96_prodigal-single.1__X__X__00308
Bact-Virgwf2_scaffold_96_prodigal-single.1__X__X__00308
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 5-149
Domain cluster:
rep: ON615601.1__UTS51982.1__X__00034__D5-121
CATH (7)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1jx4A04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.58 | 32.0 | 3.83e-01 | 81.4% | 78.6% |
| 4qfwA00 | 2.40.160.210 | Mainly Beta › Beta Barrel › Porin › Acyl-CoA thioesterase, double hotdog domain | 0.53 | 41.0 | 3.39e-01 | 82.1% | 77.6% |
| 3gekA00 | 3.10.129.10 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase | 0.52 | 34.0 | 3.60e-01 | 81.4% | 74.0% |
| 4kc5C03 | 3.10.129.110 | Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Polyketide synthase dehydratase | 0.52 | 40.0 | 3.20e-01 | 82.1% | 70.5% |
| 2jn9A01 | 2.40.30.80 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › YkvR-like | 0.51 | 32.0 | 3.83e-01 | 84.8% | 98.9% |
| 1ifrA00 | 2.60.40.1260 | Mainly Beta › Sandwich › Immunoglobulin-like › Lamin Tail domain | 0.51 | 38.0 | 4.26e-01 | 88.3% | 100.0% |
| 3webA00 | 2.60.40.770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.50 | 42.0 | 4.45e-01 | 91.0% | 98.5% |
ECOD (8)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4928608 | 3899.1.1.0 ↗ | beta complex topology › Baseplate structural protein gp8 › Baseplate structural protein gp8 › Baseplate structural protein gp8 | 0.85 | 66.0 | 6.41e-01 | 100.0% | 73.6% |
| 4538067 | 244.2.1.6 ↗ | a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › Rbx_binding | 0.67 | 21.0 | 3.33e-01 | 89.0% | 68.3% |
| 4952678 | 3698.1.1.0 ↗ | beta sandwiches › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain › Arginine methyltransferase oligomerization subdomain | 0.63 | 47.0 | 5.16e-01 | 91.0% | 93.3% |
| 3969465 | 6043.1.1.0 ↗ | a+b two layers › yfeY-like › yfeY-like › yfeY-like | 0.55 | 25.0 | 3.24e-01 | 100.0% | 73.8% |
| 4947515 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.55 | 26.0 | 3.56e-01 | 71.7% | 100.0% |
| 1176501 | 319.1.1.1 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 | 0.54 | 24.0 | 3.04e-01 | 98.6% | 66.3% |
| 4004125 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.51 | 35.0 | 3.73e-01 | 91.7% | 80.0% |
| 5081663 | 11.1.1.103 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CARDB | 0.50 | 35.0 | 3.97e-01 | 89.0% | 94.5% |