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gwf2_scaffold_96_prodigal-single.1__X__X__00475
Bact-Virgwf2_scaffold_96_prodigal-single.1__X__X__00475
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 13-71
Domain cluster:
representative
CATH (8)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1g2rA00 | 3.30.1230.10 | Alpha Beta › 2-Layer Sandwich › Hypothetical Cytosolic Protein; Chain: A; › YlxR-like | 0.62 | 47.0 | 4.02e-01 | 81.4% | 92.6% |
| 5z8nA02 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 44.0 | 4.69e-01 | 91.5% | 95.8% |
| 8eb0A01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.61 | 43.0 | 3.79e-01 | 74.6% | 81.4% |
| 3purA01 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.58 | 50.0 | 4.68e-01 | 98.3% | 93.2% |
| 1wffA00 | 4.10.1110.10 | Few Secondary Structures › Irregular › Zf-an1 domain › AN1-like Zinc finger | 0.55 | 41.0 | 3.62e-01 | 98.3% | 55.3% |
| 2mbvA00 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.55 | 44.0 | 3.80e-01 | 89.8% | 60.4% |
| 2xjyA01 | 2.10.110.10 | Mainly Beta › Ribbon › Cysteine Rich Protein › Cysteine Rich Protein | 0.53 | 44.0 | 4.32e-01 | 98.3% | 87.3% |
| 5dkaA00 | 3.30.40.10 | Alpha Beta › 2-Layer Sandwich › Herpes Virus-1 › Zinc/RING finger domain, C3HC4 (zinc finger) | 0.52 | 31.0 | 2.76e-01 | 72.9% | 35.4% |
ECOD (23)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3601939 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.74 | 45.0 | 4.80e-01 | 98.3% | 72.0% |
| 3613428 | 376.1.1.67 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3H2C3 | 0.72 | 45.0 | 3.85e-01 | 98.3% | 41.1% |
| 3884640 | 377.1.1.20 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 | 0.72 | 45.0 | 5.05e-01 | 100.0% | 84.4% |
| 3713186 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.71 | 47.0 | 2.68e-01 | 100.0% | 7.2% |
| 3705930 | 377.1.1.20 ↗ | few secondary structure elements › Glucocorticoid receptor-like › LIM domain-like › LIM domain-like › Vps39_2 | 0.68 | 43.0 | 4.61e-01 | 100.0% | 76.0% |
| 3395453 | 376.1.3.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PHD | 0.67 | 57.0 | 5.74e-01 | 96.6% | 95.0% |
| 3472648 | 376.1.3.55 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PF27108 | 0.66 | 53.0 | 5.02e-01 | 98.3% | 74.3% |
| 3424334 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.63 | 45.0 | 5.08e-01 | 94.9% | 100.0% |
| 3443584 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.59 | 47.0 | 4.82e-01 | 98.3% | 94.5% |
| 3482872 | 376.1.3.56 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger › PF30811 | 0.59 | 49.0 | 4.48e-01 | 94.9% | 71.2% |
| 3471168 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.58 | 46.0 | 4.81e-01 | 98.3% | 94.5% |
| 3412818 | 386.1.1.4 ↗ | few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-BED | 0.58 | 35.0 | 4.00e-01 | 100.0% | 97.1% |
| 3852802 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.57 | 45.0 | 4.50e-01 | 86.4% | 90.0% |
| 3266881 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.56 | 45.0 | 4.01e-01 | 89.8% | 82.4% |
| 3552588 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.55 | 41.0 | 4.25e-01 | 100.0% | 87.3% |
| 3461223 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 43.0 | 4.37e-01 | 89.8% | 85.0% |
| 3701455 | 376.1.3.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › FYVE/PHD zinc finger | 0.54 | 41.0 | 4.25e-01 | 98.3% | 96.4% |
| 3608680 | 376.1.1.0 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box | 0.54 | 42.0 | 4.25e-01 | 96.6% | 83.3% |
| 4031664 | 375.1.1.75 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › DUF2197 | 0.53 | 35.0 | 4.14e-01 | 71.2% | 100.0% |
| 3686300 | 376.1.1.27 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_5 | 0.52 | 41.0 | 4.03e-01 | 88.1% | 96.9% |
| None | — | 0.52 | 41.0 | 3.40e-01 | 98.3% | 48.6% | |
| 3642794 | 376.1.1.21 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-RING_2 | 0.51 | 45.0 | 4.15e-01 | 98.3% | 80.0% |
| 3372592 | 376.1.1.1 ↗ | few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › zf-C3HC4 | 0.51 | 40.0 | 3.64e-01 | 86.4% | 66.3% |
D2
medium
residues 82-119
Domain cluster:
representative