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haemagglutinin_protein
Euk-VirPorcine_respirovirus_1
haemagglutinin_protein__YP_009094449__Porcine_respirovirus_1__1357321
Identity
- Accession:
- YP_009094449 ↗
- Protein ID:
- haemagglutinin_protein
- Kingdom:
- euk
Quality
83.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Respirovirus›
Respirovirus_suis
TaxID: 1357321
Cluster
View cluster (61 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 235-405
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00423.27 best | HN | 160.8 | 6.50e-47 | 100.0% | 31.1% |
CATH (19)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1v3eA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.97 | 95.0 | 6.71e-01 | 100.0% | 39.7% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.91 | 88.0 | 6.24e-01 | 100.0% | 40.8% |
| 1z4vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.91 | 88.0 | 6.24e-01 | 100.0% | 40.8% |
| 4uf7B00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.91 | 86.0 | 6.19e-01 | 100.0% | 40.5% |
| 2vsmA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.84 | 80.0 | 5.84e-01 | 100.0% | 43.1% |
| 2rkcA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.69 | 64.0 | 4.80e-01 | 100.0% | 52.9% |
| 6eugA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.67 | 51.0 | 3.97e-01 | 95.3% | 38.6% |
| 2w20B01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.66 | 61.0 | 4.61e-01 | 99.4% | 73.0% |
| 1ms9A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.65 | 61.0 | 4.65e-01 | 99.4% | 71.0% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 54.0 | 4.41e-01 | 94.2% | 57.9% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.60 | 54.0 | 4.32e-01 | 95.3% | 60.2% |
| 2xcmC00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 26.0 | 3.41e-01 | 78.9% | 72.8% |
| 1rl1A00 | 2.60.40.790 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 26.0 | 3.49e-01 | 79.5% | 76.1% |
| 7bysA01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 51.0 | 4.22e-01 | 97.1% | 67.6% |
| 4qqsB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 52.0 | 4.18e-01 | 98.2% | 89.5% |
| 3c7fA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 51.0 | 4.05e-01 | 98.8% | 59.7% |
| 4irzA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.56 | 51.0 | 3.81e-01 | 100.0% | 53.3% |
| 2x5gA00 | 3.30.720.60 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.53 | 20.0 | 2.75e-01 | 87.1% | 63.7% |
| 4n4bA00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.52 | 47.0 | 3.84e-01 | 98.8% | 56.7% |
ECOD (36)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1112626 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.97 | 95.0 | 6.68e-01 | 100.0% | 39.1% |
| 4889672 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.93 | 90.0 | 6.40e-01 | 100.0% | 39.5% |
| 1519176 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.91 | 88.0 | 6.34e-01 | 100.0% | 41.0% |
| 1563144 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.91 | 88.0 | 6.06e-01 | 100.0% | 36.8% |
| 152420 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.91 | 88.0 | 6.06e-01 | 100.0% | 37.4% |
| 4881991 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.87 | 83.0 | 5.97e-01 | 100.0% | 39.5% |
| 2093820 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.85 | 82.0 | 5.86e-01 | 100.0% | 40.1% |
| 2527935 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.85 | 81.0 | 5.84e-01 | 100.0% | 40.7% |
| 3062082 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.84 | 80.0 | 5.78e-01 | 100.0% | 39.5% |
| 2541822 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.84 | 58.0 | 5.64e-01 | 77.2% | 64.4% |
| 3062081 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.82 | 78.0 | 5.64e-01 | 100.0% | 39.9% |
| 2833528 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.82 | 78.0 | 5.44e-01 | 100.0% | 36.1% |
| 3017638 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.73 | 68.0 | 4.88e-01 | 100.0% | 45.7% |
| 5010537 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.63 | 24.0 | 3.42e-01 | 79.5% | 72.2% |
| 5067191 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.62 | 24.0 | 3.47e-01 | 80.7% | 73.8% |
| 3707549 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.62 | 58.0 | 4.23e-01 | 97.7% | 58.6% |
| 3186334 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.60 | 53.0 | 4.19e-01 | 93.6% | 62.6% |
| 3924550 | 4026.1.1.0 ↗ | a+b three layers › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) › a+b domain in Rap/Ran-GAP (Pfam 02145) | 0.60 | 34.0 | 3.59e-01 | 86.5% | 61.3% |
| 3302402 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.59 | 26.0 | 3.31e-01 | 79.5% | 67.0% |
| 5037296 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.59 | 55.0 | 4.52e-01 | 99.4% | 61.0% |
| 5030007 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.59 | 22.0 | 3.20e-01 | 80.7% | 72.0% |
| 3810646 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.58 | 53.0 | 4.08e-01 | 99.4% | 71.6% |
| 4984555 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.57 | 52.0 | 4.25e-01 | 98.2% | 71.6% |
| 3431863 | 5.1.5.37 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF295 | 0.57 | 46.0 | 3.83e-01 | 100.0% | 50.3% |
| 4927714 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.57 | 53.0 | 3.92e-01 | 100.0% | 56.1% |
| 4228036 | 5.1.4.17 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A,MMS1_N | 0.56 | 52.0 | 3.31e-01 | 100.0% | 28.8% |
| 3765061 | 5.1.4.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP | 0.55 | 51.0 | 3.75e-01 | 100.0% | 52.5% |
| 3393071 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.55 | 50.0 | 3.71e-01 | 100.0% | 63.4% |
| 4104247 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.53 | 49.0 | 3.61e-01 | 100.0% | 62.0% |
| 3622698 | 5.1.3.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed | 0.53 | 49.0 | 3.86e-01 | 99.4% | 57.4% |
| 3508283 | 5.1.5.156 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_RSE1_1st | 0.52 | 48.0 | 3.57e-01 | 100.0% | 74.7% |
| 4584755 | 5.1.4.36 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › MMS1_N | 0.52 | 48.0 | 3.57e-01 | 100.0% | 77.2% |
| 3696868 | 319.1.1.3 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS | 0.52 | 26.0 | 3.04e-01 | 81.9% | 64.2% |
| 3614488 | 5.1.4.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed | 0.52 | 40.0 | 2.96e-01 | 80.7% | 68.8% |
| 3257469 | 5.1.3.246 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_RSE1_1st | 0.52 | 47.0 | 3.47e-01 | 100.0% | 68.7% |
| 5042256 | 319.1.1.0 ↗ | beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones | 0.51 | 28.0 | 3.60e-01 | 78.4% | 91.9% |
D2
medium
residues 406-548
Domain cluster:
rep: hemagglutinin-neuraminidase__YP_009094033__Sosuga_virus__1452514__D149-168_403-434_451-548
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00423.27 best | HN | 171.3 | 4.40e-50 | 100.0% | 26.8% |