←Back to structures
heat-shock_protein
Euk-VirLettuce_infectious_yellows_virus
heat-shock_protein__NP_619695__Lettuce_infectious_yellows_virus__31713
Identity
- Accession:
- NP_619695 ↗
- Protein ID:
- heat-shock_protein
- Kingdom:
- euk
Quality
86.2
mean pLDDT
Taxonomy
Orthornavirae›
Kitrinoviricota›
Alsuviricetes›
Martellivirales›
Closteroviridae›
Crinivirus›
Lettuce_infectious_yellows_virus
TaxID: 31713
Cluster
View cluster (42 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 2-172
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00012.27 best | HSP70 | 28.1 | 8.60e-07 | 98.2% | 25.7% |
CATH (52)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2qxlB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.90 | 49.0 | 5.54e-01 | 98.8% | 69.4% |
| 6gfaA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.87 | 56.0 | 6.08e-01 | 98.2% | 75.7% |
| 4gniB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.86 | 57.0 | 6.03e-01 | 99.4% | 74.5% |
| 5umbA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.85 | 79.0 | 7.76e-01 | 98.2% | 92.3% |
| 2khoA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.84 | 59.0 | 6.10e-01 | 98.2% | 76.1% |
| 2ychA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.82 | 47.0 | 4.93e-01 | 99.4% | 62.6% |
| 8oqxA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.75 | 41.0 | 4.95e-01 | 98.2% | 79.8% |
| 3hrgA02 | 3.30.420.260 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, C-terminal domain | 0.73 | 37.0 | 4.50e-01 | 100.0% | 73.7% |
| 2qi2A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.72 | 38.0 | 4.54e-01 | 100.0% | 74.6% |
| 3dlbA04 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.72 | 42.0 | 4.24e-01 | 98.8% | 57.1% |
| 3wxmB02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.71 | 41.0 | 4.78e-01 | 99.4% | 78.7% |
| 3djcB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.71 | 38.0 | 5.01e-01 | 99.4% | 98.9% |
| 4a18P00 | 3.30.720.90 | Alpha Beta › 2-Layer Sandwich › Signal recognition particle alu RNA binding heterodimer, srp9/1 › | 0.70 | 23.0 | 3.76e-01 | 84.2% | 77.3% |
| 3obyA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.70 | 35.0 | 4.34e-01 | 99.4% | 75.2% |
| 1vhxB00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.70 | 39.0 | 4.35e-01 | 100.0% | 68.1% |
| 3htvA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.70 | 44.0 | 5.45e-01 | 100.0% | 98.2% |
| 4gniA03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.69 | 36.0 | 4.88e-01 | 99.4% | 98.9% |
| 3lm2A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 37.0 | 4.88e-01 | 99.4% | 95.9% |
| 5eoxB03 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.67 | 49.0 | 5.55e-01 | 100.0% | 98.4% |
| 3obwA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.67 | 38.0 | 4.46e-01 | 100.0% | 78.8% |
| 1dt9A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.67 | 36.0 | 4.35e-01 | 100.0% | 78.6% |
| 1woqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 43.0 | 5.22e-01 | 100.0% | 99.1% |
| 3mdqA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 41.0 | 4.74e-01 | 100.0% | 85.4% |
| 4ijaB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 41.0 | 4.31e-01 | 100.0% | 67.5% |
| 1nmnA00 | 3.30.420.140 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › YqgF/RNase H-like domain | 0.66 | 37.0 | 4.34e-01 | 100.0% | 77.5% |
| 3cerC01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.66 | 41.0 | 4.65e-01 | 99.4% | 82.8% |
| 1xc3A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 39.0 | 4.94e-01 | 99.4% | 98.1% |
| 6f95A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 54.0 | 5.76e-01 | 98.8% | 98.6% |
| 3agkA02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.65 | 39.0 | 4.49e-01 | 100.0% | 81.5% |
| 2qm1B01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.65 | 41.0 | 4.41e-01 | 100.0% | 72.4% |
| 1t6cA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 40.0 | 4.61e-01 | 100.0% | 84.8% |
| 1okjB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.64 | 37.0 | 4.20e-01 | 100.0% | 74.8% |
| 4af1A02 | 3.30.420.60 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2 | 0.64 | 41.0 | 4.69e-01 | 99.4% | 86.5% |
| 2x6nD00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.64 | 34.0 | 3.43e-01 | 100.0% | 50.0% |
| 3kksB00 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 33.0 | 3.51e-01 | 100.0% | 55.9% |
| 7r8iA01 | 3.30.420.10 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H | 0.63 | 39.0 | 3.56e-01 | 98.8% | 47.9% |
| 3hi0A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.63 | 39.0 | 4.60e-01 | 100.0% | 90.6% |
| 3js6A01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.62 | 54.0 | 5.11e-01 | 100.0% | 77.7% |
| 5aj3K00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.62 | 37.0 | 4.10e-01 | 99.4% | 73.5% |
| 2xzmK00 | 3.30.420.80 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribosomal protein S11/S14 | 0.61 | 38.0 | 4.18e-01 | 100.0% | 75.7% |
| 1sazA02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.59 | 50.0 | 4.80e-01 | 99.4% | 78.2% |
| 5znqA00 | 3.40.50.2020 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.58 | 34.0 | 3.40e-01 | 99.4% | 53.0% |
| 3r9pB01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.55 | 40.0 | 3.96e-01 | 100.0% | 71.2% |
| 1zitA00 | 3.40.50.2300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator | 0.54 | 27.0 | 3.16e-01 | 100.0% | 64.5% |
| 4c23B02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.54 | 50.0 | 4.49e-01 | 99.4% | 76.5% |
| 2gzaA01 | 3.30.450.90 | Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › | 0.54 | 24.0 | 2.99e-01 | 100.0% | 63.9% |
| 1u3eM01 | 3.90.75.20 | Alpha Beta › Alpha-Beta Complex › Homing Intron 3 (I-Ppo) Encoded Endonuclease; Chain A › | 0.54 | 30.0 | 3.69e-01 | 90.6% | 86.8% |
| 4uoiC00 | 3.30.160.890 | Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Hepatitis C virus envelope glycoprotein E1, chain C | 0.53 | 18.0 | 3.18e-01 | 76.0% | 100.0% |
| 3khyA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 41.0 | 3.98e-01 | 99.4% | 73.0% |
| 4h0oA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 39.0 | 3.90e-01 | 99.4% | 73.6% |
| 3hrgA01 | 3.30.420.250 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Protein of unknown function DUF3822, N-terminal domain | 0.52 | 40.0 | 4.33e-01 | 100.0% | 94.4% |
| 4h0pA01 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.52 | 43.0 | 4.09e-01 | 100.0% | 74.5% |
ECOD (86)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3595891 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.88 | 84.0 | 7.94e-01 | 99.4% | 87.2% |
| 4066632 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 80.0 | 7.69e-01 | 100.0% | 85.8% |
| 4945323 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 71.0 | 7.47e-01 | 99.4% | 92.3% |
| 3786096 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 84.0 | 7.93e-01 | 100.0% | 88.2% |
| 3577516 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 70.0 | 6.11e-01 | 100.0% | 59.0% |
| 3597261 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.87 | 82.0 | 7.84e-01 | 98.2% | 87.9% |
| 4539356 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 81.0 | 6.12e-01 | 98.2% | 45.1% |
| 4003164 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.87 | 83.0 | 6.52e-01 | 100.0% | 53.1% |
| 3692769 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 82.0 | 7.30e-01 | 99.4% | 73.5% |
| 3611854 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 83.0 | 8.09e-01 | 100.0% | 92.4% |
| 3258354 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.87 | 83.0 | 6.38e-01 | 99.4% | 50.6% |
| 3313424 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 83.0 | 8.12e-01 | 99.4% | 94.4% |
| 3438520 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.87 | 82.0 | 6.37e-01 | 98.8% | 50.4% |
| 4679973 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 71.0 | 7.06e-01 | 100.0% | 82.3% |
| 4015579 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.87 | 82.0 | 5.96e-01 | 99.4% | 40.7% |
| 3889019 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 82.0 | 8.02e-01 | 99.4% | 91.9% |
| None | — | 0.87 | 83.0 | 7.42e-01 | 100.0% | 76.2% | |
| 3928114 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.87 | 83.0 | 5.92e-01 | 100.0% | 39.1% |
| 3595871 | 511.1.1.0 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain | 0.86 | 82.0 | 6.47e-01 | 99.4% | 53.1% |
| 3699391 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 83.0 | 5.51e-01 | 100.0% | 30.0% |
| 3531422 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 83.0 | 7.55e-01 | 100.0% | 79.5% |
| 3585719 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 82.0 | 7.66e-01 | 100.0% | 86.3% |
| 3203652 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 81.0 | 6.03e-01 | 99.4% | 43.3% |
| 3372166 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.86 | 83.0 | 5.89e-01 | 100.0% | 38.9% |
| 3348808 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.86 | 82.0 | 5.95e-01 | 99.4% | 41.0% |
| 3702508 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 82.0 | 7.79e-01 | 99.4% | 90.3% |
| 4028527 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 82.0 | 8.07e-01 | 99.4% | 94.4% |
| 3474499 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.86 | 82.0 | 5.92e-01 | 100.0% | 39.8% |
| 3508353 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 82.0 | 7.07e-01 | 100.0% | 72.0% |
| 3476114 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 82.0 | 6.02e-01 | 100.0% | 42.2% |
| 3598645 | 632.7.1.0 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain | 0.86 | 82.0 | 5.82e-01 | 99.4% | 39.6% |
| 4886706 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.86 | 81.0 | 7.93e-01 | 100.0% | 93.3% |
| 3263845 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 81.0 | 5.55e-01 | 98.2% | 33.5% |
| None | — | 0.86 | 82.0 | 6.01e-01 | 100.0% | 43.0% | |
| 3239066 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.86 | 82.0 | 5.95e-01 | 100.0% | 42.4% |
| 3593729 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.86 | 82.0 | 7.47e-01 | 100.0% | 80.5% |
| 4453799 | 632.7.1.1 ↗ | alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › HSP70 | 0.86 | 81.0 | 5.98e-01 | 100.0% | 42.5% |
| 3699747 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.85 | 81.0 | 7.89e-01 | 100.0% | 91.9% |
| 4493210 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.85 | 80.0 | 7.76e-01 | 100.0% | 90.3% |
| 3530516 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.85 | 81.0 | 7.93e-01 | 99.4% | 93.9% |
| 3741194 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.85 | 81.0 | 5.93e-01 | 100.0% | 42.7% |
| 3679206 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.85 | 81.0 | 5.82e-01 | 100.0% | 40.0% |
| 4100587 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 63.0 | 6.81e-01 | 99.4% | 89.7% |
| 3610752 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.84 | 80.0 | 5.73e-01 | 100.0% | 38.0% |
| 5082597 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 71.0 | 7.10e-01 | 100.0% | 85.1% |
| 3677939 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.84 | 81.0 | 7.76e-01 | 100.0% | 90.5% |
| 3263099 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.84 | 80.0 | 7.78e-01 | 99.4% | 91.9% |
| 4013510 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.84 | 80.0 | 7.68e-01 | 99.4% | 90.0% |
| 3423425 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.84 | 79.0 | 7.69e-01 | 100.0% | 90.8% |
| 4389834 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.84 | 74.0 | 7.35e-01 | 100.0% | 89.7% |
| 3191670 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.84 | 80.0 | 7.53e-01 | 100.0% | 90.5% |
| 3323951 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.83 | 79.0 | 7.54e-01 | 100.0% | 89.2% |
| 4886455 | 511.1.1.1 ↗ | beta sandwiches › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › Heat shock protein 70kD (HSP70), peptide-binding domain › HSP70 | 0.83 | 76.0 | 7.43e-01 | 100.0% | 88.6% |
| 3467991 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.82 | 78.0 | 7.34e-01 | 99.4% | 86.0% |
| 3963094 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.80 | 65.0 | 7.08e-01 | 96.5% | 100.0% |
| 3305506 | 2484.1.1.1 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 | 0.80 | 57.0 | 6.40e-01 | 100.0% | 91.9% |
| 5000524 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.73 | 43.0 | 4.93e-01 | 100.0% | 79.2% |
| 5012088 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.72 | 40.0 | 4.84e-01 | 99.4% | 83.6% |
| 4497431 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.70 | 42.0 | 4.83e-01 | 100.0% | 80.0% |
| 3936886 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.70 | 36.0 | 3.76e-01 | 100.0% | 54.2% |
| 4159425 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.69 | 40.0 | 4.65e-01 | 100.0% | 79.2% |
| 140445 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.69 | 39.0 | 4.50e-01 | 100.0% | 76.9% |
| 4038287 | 2484.1.1.40 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvX | 0.68 | 37.0 | 4.14e-01 | 100.0% | 65.9% |
| 4536448 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 37.0 | 4.38e-01 | 100.0% | 75.8% |
| 5036730 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.68 | 40.0 | 4.64e-01 | 100.0% | 81.7% |
| 4962202 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.68 | 39.0 | 4.32e-01 | 98.8% | 71.1% |
| 3929375 | 2496.1.1.0 ↗ | a/b three-layered sandwiches › SpoIIaa-like › SpoIIaa-like › SpoIIaa-like | 0.67 | 34.0 | 3.84e-01 | 98.8% | 62.3% |
| 4425543 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.65 | 38.0 | 4.35e-01 | 100.0% | 76.8% |
| 3282817 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 39.0 | 4.59e-01 | 79.5% | 85.8% |
| 4943251 | 2484.1.1.329 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_3 | 0.64 | 41.0 | 4.54e-01 | 100.0% | 80.7% |
| 5018575 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.64 | 35.0 | 4.22e-01 | 100.0% | 80.0% |
| 2575628 | 2484.1.1.9 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve | 0.63 | 32.0 | 3.44e-01 | 99.4% | 54.2% |
| 2845074 | 2484.1.1.29 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Ppx-GppA | 0.62 | 40.0 | 4.54e-01 | 100.0% | 84.6% |
| 4937453 | 2484.1.1.38 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › eRF1_2 | 0.62 | 40.0 | 4.49e-01 | 100.0% | 83.0% |
| 4067863 | 2484.1.1.55 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › UvrC_RNaseH_dom | 0.62 | 38.0 | 3.90e-01 | 100.0% | 61.8% |
| 4068244 | 2484.1.1.49 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › Hydant_A_N | 0.61 | 38.0 | 4.06e-01 | 100.0% | 70.0% |
| 5082297 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.60 | 35.0 | 3.65e-01 | 98.8% | 60.0% |
| 3590239 | 2484.1.1.141 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › baeRF_family6 | 0.57 | 42.0 | 4.38e-01 | 99.4% | 82.6% |
| 3737959 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.56 | 35.0 | 3.64e-01 | 100.0% | 64.2% |
| 3695358 | 7590.1.1.3 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi,ArgoMid | 0.56 | 34.0 | 3.55e-01 | 100.0% | 62.4% |
| 3230371 | 3180.1.1.0 ↗ | a+b two layers › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related › LEE-encoded effector EspG N-terminal domain-related | 0.56 | 35.0 | 4.26e-01 | 100.0% | 96.4% |
| 3729330 | 7590.1.1.2 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Piwi | 0.56 | 34.0 | 3.53e-01 | 100.0% | 62.4% |
| 3583806 | 7590.1.1.6 ↗ | a/b three-layered sandwiches › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › Middle domain in Argonaute homologs › ArgoMid | 0.53 | 33.0 | 3.37e-01 | 100.0% | 60.6% |
| 3594146 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.53 | 49.0 | 4.32e-01 | 100.0% | 72.7% |
| 3172939 | 2484.1.1.0 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like | 0.51 | 34.0 | 3.41e-01 | 73.7% | 63.9% |
| 3994856 | 2484.1.1.10 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › TsaD | 0.50 | 46.0 | 4.13e-01 | 98.8% | 78.7% |
D2
high
residues 376-476
D3
high
residues 495-550
Domain cluster:
representative
CATH (11)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2gnoA02 | 1.10.8.250 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › DNA polymerase III clamp loader domain like | 0.62 | 40.0 | 4.00e-01 | 75.0% | 63.3% |
| 3nymA00 | 6.10.290.10 | Special › Helix non-globular › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.59 | 50.0 | 3.90e-01 | 96.4% | 88.7% |
| 1sqhA01 | 3.40.630.30 | Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) | 0.58 | 47.0 | 3.46e-01 | 94.6% | 53.0% |
| 5ux1D00 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.58 | 43.0 | 3.06e-01 | 85.7% | 70.6% |
| 1chkA02 | 3.30.386.10 | Alpha Beta › 2-Layer Sandwich › Chitosanase; Chain A, domain 2 › Chitosanase, subunit A, domain 2 | 0.57 | 45.0 | 4.06e-01 | 100.0% | 74.7% |
| 2x1dA02 | 1.10.10.2120 | Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › | 0.57 | 43.0 | 4.02e-01 | 83.9% | 66.2% |
| 4oe8C00 | 1.10.8.1170 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 46.0 | 4.13e-01 | 100.0% | 95.4% |
| 2zxqA06 | 1.20.1270.70 | Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Designed single chain three-helix bundle | 0.56 | 44.0 | 4.24e-01 | 92.9% | 93.9% |
| 7t7kA01 | 1.20.930.60 | Mainly Alpha › Up-down Bundle › Transcription Elongation Factor S-II; Chain A › | 0.54 | 44.0 | 3.64e-01 | 100.0% | 89.8% |
| 2y39A00 | 1.20.120.1490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › | 0.53 | 38.0 | 3.25e-01 | 82.1% | 88.2% |
| 3t5qG01 | 1.10.150.550 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Arenavirus nucleocapsid protein, head domain | 0.51 | 39.0 | 3.30e-01 | 98.2% | 47.1% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3724838 | 192.7.1.0 ↗ | alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm | 0.64 | 52.0 | 4.93e-01 | 96.4% | 98.6% |
| 3970102 | 4953.1.1.0 ↗ | beta barrels › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like › L-aspartase C-terminal domain-like | 0.54 | 44.0 | 3.95e-01 | 96.4% | 90.6% |
D4
medium
residues 173-225_301-372
Domain cluster:
rep: heat_shock_protein_70__YP_293699__Tomato_chlorosis_virus__67754__D171-224_298-370
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00012.27 best | HSP70 | 27.2 | 1.70e-06 | 44.0% | 8.8% |
D5
medium
residues 226-300
Domain cluster:
rep: p67__YP_003075968__Carrot_yellow_leaf_virus__656190__D231-307