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heat_shock_90-like_protein

Euk-Vir

Arracacha_virus_1

heat_shock_90-like_protein__YP_009551997__Arracacha_virus_1__2201042

Identity

Accession:: YP_009551997 ↗
Protein ID:: heat_shock_90-like_protein
Kingdom:: euk

Quality

72.1 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Closterovirus› Arracacha_virus_1

TaxID: 2201042

Cluster

View cluster (11 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 178-315

PDB

Domain cluster: rep: HSP90__YP_009553249__Blackcurrant_leafroll-associated_virus_1__2292426__D184-302

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	72.7	3.40e-20	100.0%	25.4%

D2 medium residues 10-90

PDB

Domain cluster: rep: p54__YP_003075969__Carrot_yellow_leaf_virus__656190__D13-92

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4hv0C00	1.10.1220.10	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant › Met repressor-like	0.56	38.0	3.76e-01	100.0%	65.2%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3920677	593.1.1.1 ↗	alpha bundles › GroEL equatorial domain-like › GroEL equatorial domain-like › GroEL equatorial domain-like › Cpn60_TCP1	0.52	41.0	2.94e-01	92.6%	50.0%

D3 medium residues 316-431_517-548

PDB

Domain cluster: rep: 59_kDa_protein__YP_009112886__Persimmon_virus_B__1493829__D326-414

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	65.3	5.70e-18	86.5%	24.2%

D4 medium residues 432-486

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03225.20 best	Viral_Hsp90	39.9	2.80e-10	100.0%	9.2%

CATH (14)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4ptsB02	1.20.1050.10	Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 ›	0.74	55.0	3.75e-01	94.5%	24.3%
4is7A02	1.10.150.50	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Transcription Factor, Ets-1	0.66	55.0	5.07e-01	94.5%	88.9%
3fxdC00	1.20.5.420	Mainly Alpha › Up-down Bundle › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › Immunoglobulin FC, subunit C	0.65	45.0	4.72e-01	90.9%	80.0%
2b5dX01	3.20.110.10	Alpha Beta › Alpha-Beta Barrel › 7-stranded beta/alpha barrel › Glycoside hydrolase 38, N terminal domain	0.64	48.0	2.86e-01	92.7%	10.9%
7r8bB01	3.40.50.300	Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases	0.62	50.0	3.20e-01	89.1%	36.3%
4qpkB02	3.30.565.10	Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Histidine kinase-like ATPase, C-terminal domain	0.59	43.0	3.36e-01	81.8%	59.0%
3h6pC00	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.58	47.0	4.75e-01	92.7%	87.5%
2ob0C01	3.40.630.30	Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT)	0.56	47.0	3.41e-01	96.4%	59.3%
1kf6A03	1.20.58.100	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Fumarate reductase/succinate dehydrogenase flavoprotein-like, C-terminal domain	0.56	49.0	3.82e-01	100.0%	61.7%
3ce9A02	1.20.1090.10	Mainly Alpha › Up-down Bundle › Dehydroquinate synthase-like, alpha domain › Dehydroquinate synthase-like - alpha domain	0.55	47.0	3.23e-01	94.5%	35.6%
7bi4A01	1.25.40.70	Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Phosphatidylinositol 3-kinase, accessory domain (PIK)	0.54	46.0	3.17e-01	94.5%	43.0%
3urgA01	6.10.140.400	Special › Helix non-globular › Helix Hairpins ›	0.54	41.0	4.00e-01	81.8%	88.3%
6qpqB00	1.10.10.580	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Structural maintenance of chromosome 1. Chain E	0.54	45.0	3.95e-01	92.7%	92.6%
3wnkA02	3.20.20.80	Alpha Beta › Alpha-Beta Barrel › TIM Barrel › Glycosidases	0.51	42.0	2.57e-01	90.9%	34.2%

ECOD (9)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3740089	1134.1.1.7 ↗	alpha bundles › C-terminal helical domain of alanine-tRNA ligase › C-terminal helical domain of alanine-tRNA ligase › Eukaryotic C-Ala helical domain › ALA1	0.77	57.0	5.38e-01	78.2%	95.4%
4248599	192.6.1.1 ↗	alpha bundles › Long alpha-hairpin › Epsilon subunit of F1F0-ATP synthase C-terminal domain › Epsilon subunit of F1F0-ATP synthase C-terminal domain › ATP-synt_DE	0.71	53.0	5.64e-01	94.5%	89.6%
3768496	386.1.1.103 ↗	few secondary structure elements › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › beta-beta-alpha zinc fingers › zf-CCCH	0.71	62.0	4.82e-01	96.4%	58.3%
4956455	4163.1.2.0 ↗	alpha bundles › GINS helical bundle-like › GINS helical bundle-like › PSF2 C-terminal domain-like	0.64	57.0	4.67e-01	100.0%	61.0%
3839950	601.7.1.57 ↗	alpha bundles › Four-helical up-and-down bundle › HEPN › Nucleotidyltransferase substrate binding subunit/domain › HEPN_Apea	0.61	51.0	3.96e-01	100.0%	41.6%
3968112	881.1.1.0 ↗	a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like	0.60	51.0	3.82e-01	100.0%	48.1%
4093401	4187.2.1.1 ↗	a+b two layers › NosL/MerB-like › DUF2233 › DUF2233 › NAGPA	0.57	26.0	2.19e-01	83.6%	22.1%
3960012	191.1.1.0 ↗	alpha bundles › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain › Tetracyclin repressor-like, C-terminal domain	0.55	47.0	3.55e-01	90.9%	77.5%
142220	309.1.1.4 ↗	a+b two layers › LuxS, MPP, ThrRS/AlaRS common domain › LuxS, MPP, ThrRS/AlaRS common domain › LuxS/MPP-like metallohydrolase › Peptidase_M16_C	0.54	45.0	3.14e-01	96.4%	61.0%