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heat_shock_protein_70_homolog

Euk-Vir

Blueberry_virus_A

heat_shock_protein_70_homolog__YP_006628170__Blueberry_virus_A__1206566

Identity

Accession:
YP_006628170 ↗
Protein ID:
heat_shock_protein_70_homolog
Kingdom:
euk

Quality

71.2 mean pLDDT

Taxonomy

Orthornavirae› Kitrinoviricota› Alsuviricetes› Martellivirales› Closteroviridae› Bluvavirus› Blueberry_virus_A

TaxID: 1206566

Cluster

View cluster (42 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 397-530
PDB
D2 medium residues 1-179
PDB
Domain cluster: rep: heat-shock_protein__NP_619695__Lettuce_infectious_yellows_virus__31713__D2-172
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00012.27 best HSP70 55.5 4.50e-15 96.1% 27.7%
D3 medium residues 180-234_304-380
PDB
Domain cluster: rep: heat_shock_protein_70__YP_293699__Tomato_chlorosis_virus__67754__D171-224_298-370
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00012.27 best HSP70 21.1 1.20e-04 56.1% 6.2%
D4 medium residues 235-303
PDB
Domain cluster: rep: p67__YP_003075968__Carrot_yellow_leaf_virus__656190__D231-307
CATH (35)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4gniA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.82 73.0 6.81e-01 100.0% 96.5%
6rzqA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.81 73.0 6.81e-01 100.0% 96.5%
4jneA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.80 73.0 6.70e-01 100.0% 96.6%
3d2fA04 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.80 72.0 6.74e-01 100.0% 96.4%
1jcfA03 3.90.640.10 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › ATPase, substrate binding domain, subdomain 4 0.73 65.0 6.30e-01 100.0% 100.0%
1gutA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.64 41.0 4.14e-01 75.4% 65.7%
4n4nB00 3.90.640.100 Alpha Beta › Alpha-Beta Complex › Actin; Chain A, domain 4 › 0.61 41.0 4.47e-01 100.0% 89.3%
1gcbA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.60 52.0 3.27e-01 100.0% 47.7%
5jk0B01 1.10.443.10 Mainly Alpha › Orthogonal Bundle › hpI Integrase; Chain A › Intergrase catalytic core 0.60 48.0 3.63e-01 95.7% 35.3%
7a6pB01 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.60 50.0 4.02e-01 94.2% 63.8%
2k5qA00 2.40.50.480 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Protein of unknown function DUF1093 0.60 41.0 3.54e-01 71.0% 50.5%
5odnC00 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.59 41.0 3.66e-01 73.9% 52.9%
1b9mA03 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.59 42.0 4.22e-01 84.1% 74.6%
7w6zA01 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.58 46.0 4.25e-01 91.3% 80.9%
5iu1B00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.58 50.0 4.32e-01 100.0% 75.9%
2basA03 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.57 46.0 3.99e-01 91.3% 64.7%
2h7fX02 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.57 48.0 3.36e-01 95.7% 29.5%
3dorA02 2.30.42.10 Mainly Beta › Roll › Pdz3 Domain › PDZ domain 0.56 44.0 3.89e-01 87.0% 94.4%
1a41A01 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.56 46.0 3.88e-01 95.7% 54.3%
3m4aA03 3.90.15.10 Alpha Beta › Alpha-Beta Complex › Topoisomerase I; Chain A, domain 3 › Topoisomerase I; Chain A, domain 3 0.56 46.0 3.96e-01 95.7% 64.4%
2z6cA00 3.30.450.20 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › PAS domain 0.55 47.0 4.02e-01 100.0% 72.7%
3l7vA00 3.90.870.10 Alpha Beta › Alpha-Beta Complex › DHBP synthase › DHBP synthase 0.54 41.0 2.82e-01 82.6% 29.7%
4esbA00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.54 36.0 3.22e-01 94.2% 46.6%
3gveA00 3.60.21.10 Alpha Beta › 4-Layer Sandwich › Purple Acid Phosphatase; chain A, domain 2 › Metallo-dependent phosphatases 0.54 46.0 2.99e-01 97.1% 79.9%
2re1A02 3.30.70.260 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT domain 0.54 39.0 3.91e-01 95.7% 74.3%
1yr2A02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.54 44.0 2.86e-01 92.8% 25.7%
5bncB01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.53 39.0 3.17e-01 81.2% 64.4%
4m0nA02 3.55.50.30 Alpha Beta › 3-Layer(bab) Sandwich › Phage tail protein beta-alpha-beta fold › 0.53 36.0 3.55e-01 71.0% 79.2%
1lomA00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.53 38.0 3.41e-01 95.7% 51.5%
3cm1A00 2.30.31.20 Mainly Beta › Roll › Transcriptional Co-activator pc4; Chain A › Sporulation-specific cell division protein SsgB 0.53 45.0 3.70e-01 100.0% 57.4%
5h20A00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.52 36.0 3.18e-01 91.3% 48.5%
6gbuD00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.51 38.0 3.92e-01 92.8% 85.9%
1x4gA00 3.30.70.330 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › RRM (RNA recognition motif) domain 0.50 36.0 3.20e-01 91.3% 49.5%
6abqB00 1.10.10.10 Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Winged helix-like DNA-binding domain superfamily/Winged helix DNA-binding domain 0.50 33.0 2.99e-01 94.2% 45.3%
1n02A00 2.30.60.10 Mainly Beta › Roll › HIV-inactivating Protein, Cyanovirin-n › Cyanovirin-N 0.50 41.0 3.72e-01 97.1% 81.4%
ECOD (33)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4647653 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.82 74.0 4.46e-01 100.0% 21.2%
3370453 2484.1.1.1 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › HSP70 0.75 68.0 4.76e-01 100.0% 38.1%
3523834 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.68 45.0 2.82e-01 100.0% 12.9%
4944813 101.1.2.819 ↗ alpha arrays › HTH › HTH › winged helix domain › PF27231 0.66 47.0 3.37e-01 100.0% 27.6%
4523828 101.26.1.2 ↗ alpha arrays › HTH › Tex N-terminal domain › Tex N-terminal domain › HTH_44 0.65 55.0 4.41e-01 95.7% 67.1%
5045741 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.64 51.0 5.24e-01 87.0% 93.8%
3664617 2.1.1.223 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › PF28721 0.63 43.0 4.04e-01 75.4% 57.6%
5019117 223.1.1.25 ↗ a+b three layers › Profilin-like › sensor domains › sensor domains › PAS_9 0.63 50.0 4.25e-01 88.4% 73.9%
3658595 2.1.1.130 ↗ beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein › DUF223 0.62 44.0 4.38e-01 73.9% 74.3%
3942738 295.1.1.29 ↗ a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › YjeJ 0.62 51.0 4.05e-01 95.7% 83.9%
4982476 304.120.1.0 ↗ a+b two layers › Alpha-beta plaits › Ferredoxin-like domain in ThiI › Ferredoxin-like domain in ThiI 0.61 39.0 4.17e-01 95.7% 76.7%
4349826 7.1.1.0 ↗ beta barrels › PDZ domain › PDZ domain › PDZ domain 0.60 49.0 4.41e-01 92.8% 92.0%
4324559 1.1.8.0 ↗ beta barrels › cradle loop barrel › RIFT-related › Aminomethyltransferase beta-barrel domain 0.59 48.0 4.50e-01 95.7% 100.0%
3973159 101.1.8.0 ↗ alpha arrays › HTH › HTH › DNA breaking-rejoining enzymes 0.58 47.0 3.74e-01 91.3% 45.3%
3518019 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.57 42.0 3.45e-01 81.2% 70.0%
3622028 101.1.2.111 ↗ alpha arrays › HTH › HTH › winged helix domain › RQC 0.56 42.0 3.39e-01 81.2% 82.1%
3589473 4.8.1.0 ↗ beta barrels › SH3 › Chromo domain-like › Chromo domain-like 0.55 42.0 4.07e-01 85.5% 78.8%
3508428 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.55 48.0 3.55e-01 98.6% 47.2%
3928430 4.1.1.223 ↗ beta barrels › SH3 › SH3 › SH3 › KIF2A-like_1st 0.54 42.0 4.24e-01 98.6% 88.6%
3627409 6166.1.1.1 ↗ alpha bundles › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › N-terminal domain of Delta(14)-sterol reductase, MaSR1 › ERG4_ERG24 0.54 35.0 2.48e-01 89.9% 23.0%
154263 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.54 36.0 3.22e-01 94.2% 46.6%
1211453 2498.1.1.23 ↗ mixed a+b and a/b › Zincin-like › "Metalloproteases (""zincins"") catalytic domain" › "Metalloproteases (""zincins"") catalytic domain" › Peptidase_M49 0.54 42.0 2.44e-01 87.0% 10.9%
4034385 7523.1.1.0 ↗ a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II 0.54 46.0 4.04e-01 100.0% 74.5%
3417192 327.11.2.27 ↗ a+b two layers › Alpha-lytic protease prodomain-like › KH-domains › Eukaryotic type KH-domain (KH-domain type I) › KH_Vigilin 0.54 36.0 4.20e-01 85.5% 98.0%
3582308 220.1.1.16 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › DUF1681 0.53 42.0 3.91e-01 94.2% 78.9%
4245032 192.11.1.2 ↗ alpha bundles › Long alpha-hairpin › C-terminal UvrC-binding domain of UvrB › C-terminal UvrC-binding domain of UvrB › CysS_C 0.52 44.0 3.18e-01 97.1% 59.5%
4067342 5069.1.1.15 ↗ alpha bundles › Transmembrane heme-binding four-helical bundle › Transmembrane heme-binding four-helical bundle › Transmembrane di-heme cytochromes › Cytochrom_C_asm 0.52 38.0 2.52e-01 81.2% 72.8%
5003177 810.1.1.2 ↗ a+b two layers › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › BtrG-like (Pfam 03674) › GGACT 0.51 39.0 3.29e-01 84.1% 86.7%
2494143 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.51 36.0 3.10e-01 92.8% 46.8%
5053551 3241.1.1.1 ↗ alpha arrays › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › Golgi phosphoprotein 3 › GPP34 0.50 45.0 3.19e-01 100.0% 66.2%
3785586 2002.1.1.102 ↗ a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › PHP 0.50 43.0 2.86e-01 100.0% 92.5%
4976218 101.1.2.48 ↗ alpha arrays › HTH › HTH › winged helix domain › PadR 0.50 37.0 3.13e-01 88.4% 45.8%
5040104 2500.1.1.2 ↗ a/b barrels › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ten stranded beta/alpha barrel › Ribonuc_red_lgC 0.50 41.0 2.54e-01 97.1% 14.7%