helicase-2

Euk-Vir

Sucra_jujuba_nucleopolyhedrovirus

helicase-2__YP_009186748__Sucra_jujuba_nucleopolyhedrovirus__1563660

Identity

82.8 mean pLDDT

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Sucra_jujuba_nucleopolyhedrovirus

TaxID: 1563660

View cluster (35 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 42-194

PDB

Domain cluster: rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF05970.21 best	PIF1	91.9	6.20e-26	100.0%	71.3%
PF13604.13	AAA_30	40.6	3.50e-10	89.5%	57.6%
PF13245.13	AAA_19	49.2	8.50e-13	81.7%	88.1%

D2 high residues 208-232_384-446

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009342401__Spheniscid_alphaherpesvirus_1__2560777__D779-840

D3 high residues 250-381

PDB

Domain cluster: rep: helicase-2__YP_003429432__Artogeia_rapae_granulovirus__362830__D268-377

CATH (4)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3e1sA04	2.30.30.940	Mainly Beta › Roll › SH3 type barrels. ›	0.77	41.0	5.53e-01	93.2%	100.0%
1zq1A01	2.30.30.520	Mainly Beta › Roll › SH3 type barrels. ›	0.70	37.0	4.70e-01	87.9%	87.0%
2v1rA00	2.30.30.40	Mainly Beta › Roll › SH3 type barrels. › SH3 Domains	0.67	34.0	4.62e-01	93.2%	95.5%
2fhdA01	2.30.30.140	Mainly Beta › Roll › SH3 type barrels. ›	0.67	30.0	4.28e-01	96.2%	90.3%

ECOD (16)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2726885	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.80	66.0	7.11e-01	95.5%	100.0%
4101587	4.1.1.140 ↗	beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom	0.80	61.0	6.84e-01	93.2%	100.0%
3708644	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.80	66.0	7.11e-01	94.7%	100.0%
3581817	4.1.1.287 ↗	beta barrels › SH3 › SH3 › SH3 › DUF5641	0.77	37.0	5.33e-01	85.6%	96.9%
1746358	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.76	60.0	6.60e-01	93.2%	100.0%
3022070	4.1.1.140 ↗	beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom	0.76	63.0	6.75e-01	95.5%	100.0%
3023952	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.76	62.0	6.71e-01	92.4%	100.0%
3517415	4.1.1.287 ↗	beta barrels › SH3 › SH3 › SH3 › DUF5641	0.75	36.0	5.08e-01	87.1%	93.8%
4000622	4.1.1.287 ↗	beta barrels › SH3 › SH3 › SH3 › DUF5641	0.73	40.0	4.19e-01	70.5%	59.2%
3172952	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.72	64.0	5.69e-01	93.2%	99.4%
3723061	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.71	64.0	6.36e-01	94.7%	100.0%
4347063	4.1.1.140 ↗	beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom	0.71	64.0	6.44e-01	96.2%	100.0%
3385654	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.70	60.0	6.32e-01	92.4%	100.0%
3505711	4.1.1.287 ↗	beta barrels › SH3 › SH3 › SH3 › DUF5641	0.63	38.0	4.68e-01	73.5%	95.3%
3958145	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.63	32.0	4.46e-01	85.6%	100.0%
3505589	4.1.1.287 ↗	beta barrels › SH3 › SH3 › SH3 › DUF5641	0.50	40.0	4.22e-01	100.0%	91.7%