helicase-primase_helicase_subunit

Euk-Vir

Equid_gammaherpesvirus_2

helicase-primase_helicase_subunit__NP_042641__Equid_gammaherpesvirus_2__12657

Identity

84.7 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Equid_gammaherpesvirus_2

TaxID: 12657

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 292-365_709-763

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	21.2	3.20e-04	85.3%	28.9%
PF02689.21	Herpes_Helicase	114.6	5.30e-33	57.4%	8.5%
PF02689.21	Herpes_Helicase	92.7	2.30e-26	48.1%	7.0%

D2 medium residues 56-82_262-290_764-789

PDB

Domain cluster: rep: DNA_helicase-primase_complex_component__YP_009552507__Eptesicus_fuscus_gammaherpesvirus__2035399__D168-209_391-414

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	41.8	5.60e-11	42.7%	4.0%
PF02689.21	Herpes_Helicase	35.0	6.30e-09	35.4%	3.3%

D3 medium residues 83-261

PDB

Domain cluster: rep: helicase_subunit__YP_009179342__Elephant_endotheliotropic_herpesvirus_4__548914__D47-64_102-182_199-230

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	306.6	4.70e-91	100.0%	22.9%

D4 medium residues 371-451_680-706

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	119.2	2.20e-34	75.9%	10.3%

D5 medium residues 452-504_596-679

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009010991__Chimpanzee_herpesvirus_strain_105640__332937__D496-582_686-776

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	97.2	9.80e-28	62.8%	10.6%
PF02689.21	Herpes_Helicase	85.3	3.90e-24	42.3%	6.9%

D6 medium residues 505-595

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009042021__Bovine_gammaherpesvirus_6__1504288__D477-585

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	47.5	1.00e-12	100.0%	12.9%