helicase-primase_helicase_subunit

Euk-Vir

Meleagrid_alphaherpesvirus_1

helicase-primase_helicase_subunit__NP_073298__Meleagrid_alphaherpesvirus_1__37108

Identity

75.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Meleagrid_alphaherpesvirus_1

TaxID: 37108

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 33-44_65-125_185-277_294-324_839-858

PDB

Domain cluster: rep: ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331__D45-78_114-298

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	143.1	1.30e-41	58.1%	16.2%
PF02689.21	Herpes_Helicase	82.8	2.20e-23	35.5%	7.4%

D2 medium residues 45-64_126-184_278-293

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009252281__Canid_alphaherpesvirus_1__170325__D79-134_175-212

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	45.7	3.70e-12	96.8%	6.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1yiqA02	1.10.760.10	Mainly Alpha › Orthogonal Bundle › Cytochrome Bc1 Complex; Chain D, domain 2 › Cytochrome c-like domain	0.51	36.0	3.51e-01	83.2%	67.0%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4628815	107.1.1.9 ↗	alpha arrays › Cytochrome c-like › Cytochrome c › Cytochrome c › Cytochrome_CBB3	0.51	36.0	3.47e-01	83.2%	64.5%

D3 medium residues 325-396_781-838

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	106.3	1.70e-30	55.4%	8.5%
PF02689.21	Herpes_Helicase	78.8	3.60e-22	47.7%	7.3%

D4 medium residues 397-485_685-780

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_401681__Human_gammaherpesvirus_4__10376__D383-471_648-661_682-731

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	84.7	6.00e-24	51.9%	10.6%
PF02689.21	Herpes_Helicase	75.4	3.80e-21	50.8%	11.3%

D5 medium residues 486-561_627-684

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_004940266__Saimiriine_betaherpesvirus_4__1535247__D509-572_638-677

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	71.2	7.10e-20	61.2%	8.4%
PF02689.21	Herpes_Helicase	36.2	2.70e-09	59.0%	8.8%