helicase-primase_helicase_subunit

Euk-Vir

Psittacid_alphaherpesvirus_1

helicase-primase_helicase_subunit__NP_944435__Psittacid_alphaherpesvirus_1__50294

Identity

76.0 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Iltovirus› Psittacid_alphaherpesvirus_1

TaxID: 50294

View cluster (90 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 323-391_778-835

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	82.3	3.20e-23	54.3%	8.2%
PF02689.21	Herpes_Helicase	78.4	4.90e-22	49.6%	7.3%

D2 medium residues 15-46_74-134_212-238_254-320_836-855

PDB

Domain cluster: rep: ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331__D45-78_114-298

Pfam (4)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	32.8	8.70e-08	76.3%	52.2%
PF13604.13	AAA_30	34.5	2.50e-08	75.8%	74.4%
PF02689.21	Herpes_Helicase	114.3	6.60e-33	53.1%	13.7%
PF02689.21	Herpes_Helicase	78.3	5.00e-22	34.3%	7.9%

D3 medium residues 398-481_762-774

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	72.9	2.10e-20	93.8%	10.0%

D4 medium residues 482-562_628-761

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009010991__Chimpanzee_herpesvirus_strain_105640__332937__D496-582_686-776

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	83.3	1.50e-23	63.7%	15.3%
PF02689.21	Herpes_Helicase	64.7	6.70e-18	41.9%	10.0%