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helicase-primase_helicase_subunit

Euk-Vir

Anguillid_herpesvirus_1

helicase-primase_helicase_subunit__YP_003358176__Anguillid_herpesvirus_1__150286

Identity

Accession:
YP_003358176 ↗
Protein ID:
helicase-primase_helicase_subunit
Kingdom:
euk

Quality

73.6 mean pLDDT

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 351-459
PDB
CATH (13)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2digA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 40.0 5.09e-01 99.1% 82.4%
2eqjA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.78 40.0 5.08e-01 99.1% 83.3%
1mhnA00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.77 40.0 5.32e-01 96.3% 94.9%
3p8bB02 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.76 42.0 5.46e-01 95.4% 96.8%
6bhdA03 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.75 38.0 4.92e-01 93.6% 85.7%
2jngA00 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.69 45.0 5.30e-01 78.0% 93.5%
4c5eC02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.69 37.0 3.93e-01 98.2% 59.4%
7oc3A01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.67 44.0 4.73e-01 71.6% 78.3%
1y96D00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.66 40.0 4.50e-01 98.2% 79.5%
1x6gA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.64 42.0 4.87e-01 100.0% 90.1%
1n27A00 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.64 37.0 3.94e-01 97.2% 64.6%
2k4yA00 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.59 40.0 4.42e-01 70.6% 88.4%
1df0A02 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.58 39.0 4.16e-01 70.6% 79.3%
ECOD (63)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3671396 4.1.1.316 beta barrels › SH3 › SH3 › SH3 › PUB62-63_C 0.82 44.0 5.40e-01 97.2% 80.8%
3710007 4.1.1.372 beta barrels › SH3 › SH3 › SH3 › PF30207 0.80 73.0 7.06e-01 97.2% 99.2%
4075769 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.77 40.0 5.47e-01 93.6% 100.0%
3922679 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.77 37.0 5.25e-01 94.5% 100.0%
3840677 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.77 44.0 4.65e-01 72.5% 63.0%
3429053 4.1.1.12 beta barrels › SH3 › SH3 › SH3 › PWWP 0.76 40.0 3.36e-01 98.2% 32.2%
3702850 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.76 71.0 6.44e-01 99.1% 96.4%
3917568 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.76 43.0 4.28e-01 72.5% 53.9%
4420173 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.75 45.0 5.40e-01 78.9% 88.0%
4026282 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.75 43.0 4.66e-01 71.6% 67.8%
3699523 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.75 69.0 5.96e-01 99.1% 98.8%
3714141 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.75 69.0 6.30e-01 99.1% 98.6%
3492016 4.1.1.43 beta barrels › SH3 › SH3 › SH3 › SMN_Tudor 0.75 43.0 4.71e-01 83.5% 68.9%
3267329 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.74 42.0 4.05e-01 70.6% 48.8%
3218349 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 40.0 4.31e-01 70.6% 61.1%
3759446 4.1.1.73 beta barrels › SH3 › SH3 › SH3 › Cul7 0.74 46.0 5.08e-01 78.0% 76.7%
3267759 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.74 67.0 5.82e-01 98.2% 97.5%
3997949 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.74 43.0 4.74e-01 72.5% 71.1%
3592525 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 59.0 5.94e-01 85.3% 94.5%
3910433 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.73 42.0 5.38e-01 94.5% 96.9%
3628870 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 41.0 4.17e-01 72.5% 55.5%
4104915 4.1.1.245 beta barrels › SH3 › SH3 › SH3 › SspH 0.73 39.0 5.11e-01 97.2% 95.0%
3504417 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.73 43.0 4.71e-01 72.5% 71.1%
3816455 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.72 67.0 6.39e-01 100.0% 96.0%
3344796 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.72 40.0 4.55e-01 97.2% 72.3%
3669214 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.72 67.0 6.25e-01 100.0% 89.2%
3022070 4.1.1.140 beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom 0.72 67.0 6.60e-01 100.0% 94.7%
2726885 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.71 66.0 6.50e-01 100.0% 94.7%
5029363 4.6.1.0 beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain 0.71 36.0 4.85e-01 98.2% 91.7%
3575959 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.70 44.0 4.42e-01 71.6% 62.7%
5033892 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.70 41.0 5.21e-01 98.2% 98.5%
3234107 4.1.1.169 beta barrels › SH3 › SH3 › SH3 › DUF4819 0.70 41.0 5.03e-01 96.3% 91.4%
3795301 4.1.1.319 beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.70 40.0 4.61e-01 99.1% 77.5%
3787586 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.69 45.0 4.61e-01 72.5% 68.6%
3170688 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.69 38.0 5.06e-01 98.2% 100.0%
146236 4.1.1.51 beta barrels › SH3 › SH3 › SH3 › SGF29_Tudor 0.68 42.0 4.29e-01 70.6% 63.0%
3575199 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 45.0 4.65e-01 72.5% 70.5%
3511277 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.68 48.0 5.50e-01 98.2% 100.0%
3768346 4.1.1.226 beta barrels › SH3 › SH3 › SH3 › KDM3B_Tudor 0.68 44.0 5.23e-01 74.3% 96.0%
4210485 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.67 38.0 4.79e-01 98.2% 93.8%
3790897 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.67 43.0 4.53e-01 71.6% 72.0%
3259547 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.66 46.0 4.58e-01 72.5% 85.2%
3437523 4.1.1.303 beta barrels › SH3 › SH3 › SH3 › SH3_retrovirus 0.65 38.0 4.71e-01 98.2% 91.4%
3562174 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.65 43.0 4.56e-01 74.3% 74.0%
3930643 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.65 36.0 4.69e-01 95.4% 100.0%
3938261 4.1.1.360 beta barrels › SH3 › SH3 › SH3 › KOW, G-patch_2 0.62 45.0 4.03e-01 89.0% 54.7%
4470603 4.1.1.217 beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 0.62 45.0 3.90e-01 76.1% 90.9%
3714156 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.62 43.0 4.82e-01 94.5% 91.8%
3756428 4.1.1.3 beta barrels › SH3 › SH3 › SH3 › KOW 0.62 47.0 4.90e-01 92.7% 86.0%
3500448 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.61 35.0 4.37e-01 92.7% 95.4%
3940362 2484.1.1.0 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.60 41.0 3.19e-01 92.7% 33.2%
3672445 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.60 48.0 4.38e-01 85.3% 97.9%
3924617 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.59 41.0 4.21e-01 71.6% 73.3%
3675653 4.1.1.239 beta barrels › SH3 › SH3 › SH3 › SH3-B_UBE2O 0.59 39.0 4.68e-01 97.2% 100.0%
3866038 4.1.1.154 beta barrels › SH3 › SH3 › SH3 › DUF4772 0.57 43.0 4.81e-01 78.9% 100.0%
3626415 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.56 42.0 4.29e-01 99.1% 81.0%
3576940 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.55 44.0 3.43e-01 84.4% 40.9%
3555931 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.54 47.0 4.68e-01 94.5% 90.4%
3712451 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 43.0 4.12e-01 85.3% 80.0%
4002679 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.53 46.0 4.47e-01 92.7% 93.3%
3627688 4.1.1.319 beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 0.52 47.0 4.20e-01 97.2% 85.3%
3416068 4.1.1.187 beta barrels › SH3 › SH3 › SH3 › DIRP 0.52 46.0 4.11e-01 96.3% 71.0%
3819340 4.1.1.322 beta barrels › SH3 › SH3 › SH3 › GPKOW_C 0.52 46.0 4.53e-01 96.3% 87.5%
D2 medium residues 53-110_192-286_532-541
PDB
D3 medium residues 111-191
PDB
D4 medium residues 287-317_510-531
PDB
Domain cluster: representative
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
3iq1B00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.58 41.0 3.07e-01 79.2% 77.4%
2rknA00 1.10.110.10 Mainly Alpha › Orthogonal Bundle › Hydrophobic Seed Protein › Plant lipid-transfer and hydrophobic proteins 0.53 37.0 3.39e-01 75.5% 77.9%
D5 medium residues 318-350_460-509
PDB
CATH (74)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
5gvrA00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.78 69.0 5.01e-01 100.0% 60.7%
3upuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 71.0 6.06e-01 100.0% 72.3%
4w7sA01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.77 69.0 4.81e-01 100.0% 55.6%
3e1sA03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 71.0 5.83e-01 100.0% 60.3%
5eanA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.76 71.0 5.16e-01 100.0% 47.8%
4b3fX03 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.74 68.0 5.05e-01 100.0% 48.0%
5rl9B01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 67.0 5.42e-01 100.0% 55.7%
6qv4A04 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.72 64.0 4.87e-01 100.0% 82.7%
6jimB01 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.71 63.0 5.25e-01 100.0% 56.6%
3b85A00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.68 60.0 4.68e-01 100.0% 60.4%
4c6sA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.66 56.0 4.72e-01 94.0% 63.4%
6r8gA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.66 57.0 4.88e-01 100.0% 73.2%
1wp9A02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.66 60.0 4.88e-01 100.0% 80.5%
1a3cA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.66 58.0 4.65e-01 100.0% 60.2%
3fxaA00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.65 57.0 4.39e-01 100.0% 46.1%
1hyeA01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.64 55.0 4.67e-01 100.0% 73.5%
3dh0B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 54.0 4.27e-01 100.0% 47.9%
1y8cA01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 54.0 4.29e-01 100.0% 50.0%
5je6A01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 54.0 4.03e-01 100.0% 40.8%
1xxlA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 54.0 4.02e-01 100.0% 38.9%
3busB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.63 54.0 3.96e-01 100.0% 38.4%
2o57A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 54.0 4.40e-01 100.0% 56.4%
1j5xA02 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 54.0 4.54e-01 100.0% 66.0%
3gwzA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 54.0 3.91e-01 100.0% 36.8%
7s6eA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.62 54.0 4.69e-01 100.0% 92.5%
2i6gB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 54.0 4.16e-01 100.0% 47.2%
3frhA02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 53.0 4.23e-01 100.0% 48.1%
3fj1A01 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.62 54.0 4.18e-01 100.0% 48.2%
4jc8A01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.62 54.0 4.64e-01 100.0% 66.9%
1nv8A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.62 54.0 4.16e-01 100.0% 57.4%
5fbhA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 54.0 4.22e-01 100.0% 52.9%
1rljA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.61 50.0 4.35e-01 98.8% 56.3%
3eqzB00 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.61 51.0 4.50e-01 96.4% 61.6%
4cu2A00 3.40.50.12090 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 42.0 4.28e-01 94.0% 73.8%
4w8hA00 3.40.50.10140 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Toll/interleukin-1 receptor homology (TIR) domain 0.61 51.0 4.48e-01 94.0% 66.9%
1ne2B00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.61 53.0 4.17e-01 100.0% 45.4%
3pukA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.61 54.0 4.68e-01 100.0% 71.3%
1nni100 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.61 50.0 4.06e-01 94.0% 58.8%
1pzmA00 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.61 53.0 4.26e-01 100.0% 67.6%
4h2dA00 3.40.50.360 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Flavodoxin domain 0.60 51.0 4.16e-01 94.0% 78.5%
4xrpC01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 53.0 4.24e-01 100.0% 61.1%
1epuA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.60 53.0 4.65e-01 100.0% 71.9%
2xheA01 3.40.50.2060 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Sec1/Munc18 (SM) protein, domain 1 0.60 52.0 4.61e-01 100.0% 70.3%
1m3sB00 3.40.50.10490 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 0.60 52.0 4.12e-01 100.0% 46.4%
3i9fB00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 4.21e-01 100.0% 59.2%
2ip2A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.60 52.0 3.78e-01 100.0% 44.7%
3gybA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 52.0 4.45e-01 100.0% 84.8%
3e7pA00 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 51.0 3.74e-01 100.0% 36.0%
6uutB01 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.59 50.0 3.92e-01 100.0% 41.5%
1rrmA01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 51.0 4.06e-01 100.0% 83.7%
1usgA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 52.0 4.40e-01 100.0% 81.2%
4ms4B02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.59 50.0 4.04e-01 100.0% 69.4%
1u9yA02 3.40.50.2020 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.59 50.0 4.45e-01 100.0% 66.1%
5gm2K01 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.59 50.0 3.78e-01 100.0% 37.6%
1o97D02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.58 49.0 4.30e-01 94.0% 67.5%
2afcA00 3.40.220.10 Alpha Beta › 3-Layer(aba) Sandwich › Leucine Aminopeptidase, subunit E; domain 1 › Leucine Aminopeptidase, subunit E, domain 1 0.58 50.0 4.19e-01 100.0% 93.5%
5ow0A02 3.40.50.1220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › TPP-binding domain 0.58 49.0 4.27e-01 94.0% 66.1%
2jfqA02 3.40.50.1860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 50.0 4.60e-01 100.0% 94.7%
5k2mA01 3.40.50.20 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.58 44.0 4.31e-01 95.2% 75.0%
1u0tB01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.58 46.0 3.92e-01 94.0% 52.5%
4wesB02 3.40.50.1980 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Nitrogenase molybdenum iron protein domain 0.58 48.0 4.52e-01 94.0% 90.4%
1x19A02 3.40.50.150 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 0.57 49.0 4.09e-01 100.0% 75.0%
4maaA02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.57 49.0 3.98e-01 100.0% 71.2%
3sxuB00 3.40.50.10220 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › DNA polymerase III, psi subunit 0.56 42.0 4.00e-01 95.2% 66.7%
1cvrA01 3.40.50.10390 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Gingipain r; domain 1 0.55 46.0 4.17e-01 94.0% 87.2%
3n6xA02 3.40.50.11290 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 46.0 4.36e-01 94.0% 92.9%
4p53A01 3.40.50.1970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.55 47.0 3.84e-01 100.0% 62.7%
1yt5A01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.54 45.0 3.98e-01 96.4% 60.8%
3olcX01 3.40.50.10190 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › BRCT domain 0.53 44.0 4.29e-01 96.4% 100.0%
1xknA00 3.75.10.10 Alpha Beta › 5-stranded Propeller › L-arginine/glycine Amidinotransferase; Chain A › L-arginine/glycine Amidinotransferase; Chain A 0.52 45.0 2.97e-01 96.4% 86.7%
3rotA01 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.52 44.0 3.78e-01 95.2% 77.0%
3g5sA01 3.50.50.60 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › FAD/NAD(P)-binding domain 0.52 44.0 3.17e-01 100.0% 59.3%
3pfnD01 3.40.50.10330 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Probable inorganic polyphosphate/atp-NAD kinase; domain 1 0.51 44.0 3.63e-01 95.2% 90.1%
6ecpB01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.50 40.0 3.47e-01 92.8% 62.8%
ECOD (81)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3719002 2004.1.1.203 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 0.91 77.0 6.34e-01 97.6% 54.1%
3596401 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 70.0 5.79e-01 97.6% 55.6%
3511279 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.81 75.0 5.57e-01 100.0% 47.7%
3605331 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.78 72.0 5.21e-01 100.0% 44.9%
3891107 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 71.0 5.11e-01 100.0% 51.8%
3475074 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.77 71.0 4.96e-01 100.0% 45.3%
3567663 2004.1.1.185 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_11,AAA_12 0.77 71.0 4.21e-01 100.0% 19.1%
3807611 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.76 72.0 5.70e-01 100.0% 58.1%
4331804 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.76 71.0 5.28e-01 100.0% 44.6%
3428412 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 70.0 5.01e-01 100.0% 44.5%
3589167 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.75 69.0 5.74e-01 100.0% 65.7%
3542881 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.75 69.0 4.90e-01 100.0% 52.8%
3598402 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.75 67.0 4.91e-01 100.0% 74.1%
3705020 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.74 68.0 4.60e-01 100.0% 38.1%
3731003 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.74 68.0 4.87e-01 100.0% 44.0%
3408803 2004.1.1.186 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 0.73 67.0 5.00e-01 100.0% 50.3%
2512657 2004.1.1.62 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 0.71 63.0 5.07e-01 100.0% 50.9%
5022188 2004.1.1.49 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD-helicase 0.71 64.0 3.86e-01 100.0% 24.5%
3977446 2007.1.3.0 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like 0.70 56.0 4.68e-01 94.0% 51.4%
3518589 101.1.2.591 alpha arrays › HTH › HTH › winged helix domain › ssDNA_TraI_N 0.69 62.0 4.24e-01 100.0% 29.7%
4926805 2004.1.1.30 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C 0.68 61.0 4.28e-01 100.0% 56.2%
4114207 7588.1.1.1 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.66 57.0 5.53e-01 100.0% 85.3%
4960428 2003.1.5.81 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_25 0.65 56.0 4.08e-01 100.0% 38.0%
4857728 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.64 55.0 4.71e-01 100.0% 64.3%
5000340 2007.6.1.0 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain 0.64 57.0 4.20e-01 100.0% 38.1%
None 0.64 56.0 4.27e-01 100.0% 43.5%
4119115 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.64 55.0 4.20e-01 100.0% 56.2%
3287115 2003.1.5.55 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PrmA 0.64 55.0 4.77e-01 100.0% 68.9%
4946884 2007.6.1.0 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain 0.63 55.0 4.23e-01 98.8% 44.6%
4998190 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.63 55.0 4.00e-01 100.0% 38.0%
3814557 2007.9.1.1 a/b three-layered sandwiches › Flavodoxin-like › Toll/Interleukin receptor TIR domain › Toll/Interleukin receptor TIR domain › TIR 0.63 53.0 4.28e-01 94.0% 51.5%
None 0.63 55.0 4.30e-01 100.0% 45.8%
None 0.63 55.0 4.22e-01 100.0% 43.5%
4422264 7588.1.1.1 a/b three-layered sandwiches › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › NadA-like/4-hydroxy-3-methylbut-2-enyl diphosphate reductase › LYTB 0.63 56.0 5.30e-01 100.0% 84.0%
5052194 2007.15.1.0 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.63 55.0 4.85e-01 100.0% 83.2%
5036549 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.63 54.0 4.62e-01 100.0% 63.4%
5073705 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.63 54.0 3.96e-01 100.0% 38.5%
4968100 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.62 54.0 4.52e-01 100.0% 60.0%
3642856 2003.1.5.47 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › PRMT5 0.62 53.0 5.19e-01 100.0% 100.0%
5040385 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.62 55.0 4.27e-01 100.0% 44.3%
3505045 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.62 54.0 3.94e-01 100.0% 35.5%
3261825 2007.15.1.0 a/b three-layered sandwiches › Flavodoxin-like › N-deoxyribosyltransferase › N-deoxyribosyltransferase 0.62 48.0 4.25e-01 95.2% 56.8%
2541649 2003.1.5.67 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_12 0.62 54.0 3.76e-01 100.0% 31.0%
4355742 2003.1.5.163 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2, Methyltransf_25 0.62 53.0 4.00e-01 100.0% 42.3%
4987210 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.61 53.0 4.00e-01 100.0% 43.4%
4029632 7526.1.1.1 a/b three-layered sandwiches › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › Initiation factor IF2/eIF5b, domain 3 › IF-2 0.61 53.0 4.69e-01 95.2% 70.8%
5056562 2003.1.5.82 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_31 0.61 52.0 4.24e-01 100.0% 53.7%
5022314 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.61 53.0 4.22e-01 98.8% 49.1%
3454343 2003.1.5.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases 0.61 50.0 4.36e-01 100.0% 58.5%
3290381 2003.1.8.4 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › MurCD/PglD N-terminal domain-like › MurD-like_N 0.61 50.0 4.87e-01 100.0% 80.0%
3805409 2003.1.5.202 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TPMT, Methyltransf_25 0.61 52.0 3.95e-01 100.0% 42.3%
5065407 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.61 53.0 4.15e-01 100.0% 48.6%
4860876 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.60 51.0 4.27e-01 100.0% 62.7%
5018998 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.60 52.0 4.01e-01 98.8% 41.0%
5000339 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.60 52.0 4.31e-01 100.0% 55.6%
3733242 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.60 51.0 3.69e-01 100.0% 34.8%
4146965 2003.1.1.120 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › NAD-bd_HRPKS_sdrA 0.60 49.0 3.76e-01 92.8% 39.0%
4999455 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.60 52.0 4.13e-01 100.0% 47.2%
3946578 2007.1.3.12 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › CheY-like › VpsT-like_REC 0.60 50.0 4.31e-01 95.2% 57.8%
4045708 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.60 52.0 4.07e-01 100.0% 45.9%
4626950 2003.1.5.40 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › TrmK 0.59 51.0 4.14e-01 100.0% 52.9%
3442104 7585.1.1.1 a/b three-layered sandwiches › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Rossmann-like domains in Sec1/munc18-like proteins › Sec1 0.59 52.0 4.49e-01 100.0% 65.2%
3669208 2003.1.1.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains 0.59 51.0 3.99e-01 100.0% 49.2%
4994287 2007.6.1.4 a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS 0.59 51.0 3.99e-01 100.0% 44.0%
3690943 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.59 50.0 3.62e-01 100.0% 35.3%
5033383 2007.1.7.3 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Rossmann-like domain in dehydroquinate synthase-like enzymes › Fe-ADH_2 0.59 51.0 4.21e-01 100.0% 86.9%
3287893 2003.1.5.3 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_2 0.58 50.0 3.39e-01 100.0% 36.4%
3367996 2003.1.1.76 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › SDH_C 0.58 50.0 3.99e-01 100.0% 45.1%
3640768 129.1.1.54 alpha arrays › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › 6-phosphogluconate dehydrogenase C-terminal domain-like › NAD-bd_HRPKS_sdrA 0.58 50.0 3.82e-01 96.4% 42.0%
None 0.58 49.0 3.64e-01 100.0% 36.7%
3907569 2003.1.5.66 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_11 0.58 49.0 4.06e-01 100.0% 52.7%
5071080 2003.1.5.79 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › S-adenosyl-L-methionine-dependent methyltransferases › Methyltransf_23 0.57 48.0 3.84e-01 100.0% 48.2%
4881452 7523.1.1.8 a/b three-layered sandwiches › Periplasmic binding protein-like II › Periplasmic binding protein-like II › Periplasmic binding protein-like II › SBP_bac_1 0.57 40.0 4.39e-01 94.0% 92.5%
4939902 2003.2.1.0 a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 0.56 47.0 4.43e-01 100.0% 75.5%
3804428 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.55 47.0 3.54e-01 100.0% 50.7%
3469732 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.54 46.0 3.36e-01 100.0% 45.7%
4380937 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.54 46.0 3.29e-01 100.0% 40.9%
3518822 2003.1.10.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › PreATP-grasp domain 0.53 44.0 3.95e-01 94.0% 75.2%
3723369 323.1.1.3 a+b complex topology › CoA-dependent acyltransferases › CoA-dependent acyltransferases › CoA-dependent acyltransferases › AMP-binding 0.53 46.0 3.36e-01 100.0% 42.8%
3394509 2007.1.2.31 a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › LBD_receptor 0.53 44.0 3.62e-01 100.0% 68.9%
4571279 2005.1.1.9 a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › DNA_photolyase 0.51 43.0 3.41e-01 100.0% 55.5%