helicase-primase_helicase_subunit

Euk-Vir

Chimpanzee_herpesvirus_strain_105640

helicase-primase_helicase_subunit__YP_009010991__Chimpanzee_herpesvirus_strain_105640__332937

Identity

81.7 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Chimpanzee_herpesvirus_strain_105640

TaxID: 332937

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 352-415_804-866

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	92.6	2.30e-26	52.8%	8.2%
PF02689.21	Herpes_Helicase	104.2	7.40e-30	51.2%	7.8%

D2 medium residues 53-67_87-104_125-141_236-252_282-340

PDB

Domain cluster: rep: ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331__D45-78_114-298

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	91.1	6.60e-26	48.4%	7.5%

D3 medium residues 422-495_777-802

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	80.0	1.50e-22	75.0%	9.2%

D4 medium residues 496-582_686-776

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	80.8	9.00e-23	56.2%	11.3%
PF02689.21	Herpes_Helicase	84.1	9.00e-24	48.9%	8.8%

CATH (2)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
6u9hF02	3.30.70.1150	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › ACT-like. Chain A, domain 2	0.57	24.0	3.46e-01	96.1%	87.0%
3c1mA02	3.30.2130.10	Alpha Beta › 2-Layer Sandwich › VC0802-like › VC0802-like	0.51	25.0	2.65e-01	93.8%	48.2%