helicase-primase_helicase_subunit

Euk-Vir

Equid_gammaherpesvirus_5

helicase-primase_helicase_subunit__YP_009118433__Equid_gammaherpesvirus_5__10371

Identity

82.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Equid_gammaherpesvirus_5

TaxID: 10371

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 27-102_122-137_161-228_788-811

PDB

Domain cluster: rep: ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331__D45-78_114-298

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	107.6	7.10e-31	47.3%	9.7%
PF02689.21	Herpes_Helicase	98.8	3.20e-28	45.6%	8.5%

D2 medium residues 288-359_728-787

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF01443.25 best	Viral_helicase1	21.1	3.50e-04	81.8%	27.2%
PF02689.21	Herpes_Helicase	133.0	1.40e-38	56.1%	9.0%
PF02689.21	Herpes_Helicase	96.3	1.80e-27	47.0%	7.3%

D3 medium residues 386-465

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	111.7	4.10e-32	100.0%	10.0%

D4 medium residues 466-492_597-727

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009010991__Chimpanzee_herpesvirus_strain_105640__332937__D496-582_686-776

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	157.6	5.50e-46	84.8%	16.3%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4go6B01	2.60.40.10	Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins	0.51	17.0	2.65e-01	98.1%	73.3%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1746358	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.69	33.0	3.93e-01	100.0%	65.7%
3385654	4.1.1.0 ↗	beta barrels › SH3 › SH3 › SH3	0.69	34.0	3.89e-01	100.0%	62.5%
4584002	220.1.1.219 ↗	beta barrels › PH domain-like › PH domain-like › PH domain-like › CheF-arch	0.50	31.0	3.67e-01	99.4%	91.4%

D5 medium residues 493-596

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009042021__Bovine_gammaherpesvirus_6__1504288__D477-585

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	79.6	2.10e-22	100.0%	14.7%