helicase-primase_helicase_subunit

Euk-Vir

Human_alphaherpesvirus_1

helicase-primase_helicase_subunit__YP_009137079__Human_alphaherpesvirus_1__10298

Identity

75.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Human_alphaherpesvirus_1

TaxID: 10298

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 353-399_410-415_806-858

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	82.2	3.50e-23	54.7%	6.8%
PF02689.21	Herpes_Helicase	75.1	4.80e-21	49.1%	5.8%

D2 medium residues 79-96_113-207_274-352_859-882

PDB

Domain cluster: rep: ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331__D45-78_114-298

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	108.2	4.60e-31	46.8%	10.9%
PF02689.21	Herpes_Helicase	131.0	6.00e-38	39.8%	9.9%

D3 medium residues 419-495_780-803

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	86.5	1.70e-24	79.2%	9.4%

D4 medium residues 496-518_696-779

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	74.6	6.40e-21	79.4%	9.9%

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3fvcA03	2.30.29.100	Mainly Beta › Roll › PH-domain like ›	0.55	48.0	4.78e-01	94.4%	94.5%
4osnA00	2.30.29.100	Mainly Beta › Roll › PH-domain like ›	0.53	46.0	4.57e-01	95.3%	95.5%
2p3wB01	2.30.42.10	Mainly Beta › Roll › Pdz3 Domain › PDZ domain	0.50	31.0	3.26e-01	100.0%	68.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3622222	101.1.2.164 ↗	alpha arrays › HTH › HTH › winged helix domain › TFA2_Winged_2	0.52	24.0	3.01e-01	93.5%	69.2%

D5 medium residues 519-562_655-695

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_004940266__Saimiriine_betaherpesvirus_4__1535247__D509-572_638-677

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	49.1	3.40e-13	60.0%	5.6%