helicase-primase_helicase_subunit

Euk-Vir

Columbid_alphaherpesvirus_1

helicase-primase_helicase_subunit__YP_009352909__Columbid_alphaherpesvirus_1__93386

Identity

74.9 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Columbid_alphaherpesvirus_1

TaxID: 93386

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 329-396_784-839

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	96.5	1.60e-27	55.6%	8.3%
PF02689.21	Herpes_Helicase	80.3	1.20e-22	47.6%	6.8%

D2 medium residues 36-47_72-129_240-327_840-860

PDB

Domain cluster: rep: ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331__D45-78_114-298

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	147.5	6.00e-43	52.0%	11.3%
PF02689.21	Herpes_Helicase	73.6	1.40e-20	36.9%	7.0%

D3 medium residues 399-478_755-783

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	77.2	1.10e-21	78.0%	10.4%

D4 medium residues 479-496_675-754

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009137079__Human_alphaherpesvirus_1__10298__D496-518_696-779

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	55.9	3.00e-15	81.6%	9.2%

D5 medium residues 497-565_632-674

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_004940266__Saimiriine_betaherpesvirus_4__1535247__D509-572_638-677

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	58.4	5.20e-16	71.4%	9.2%