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helicase-primase_helicase_subunit

Euk-Vir

Rhinolophus_gammaherpesvirus_1

helicase-primase_helicase_subunit__YP_009551853__Rhinolophus_gammaherpesvirus_1__2054179

Identity

Accession:: YP_009551853 ↗
Protein ID:: helicase-primase_helicase_subunit
Kingdom:: euk

Quality

84.3 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Percavirus› Rhinolophus_gammaherpesvirus_1

TaxID: 2054179

Cluster

View cluster (90 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 292-354_709-767

PDB

Domain cluster: rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	109.6	1.80e-31	51.6%	7.8%
PF02689.21	Herpes_Helicase	88.0	6.00e-25	50.0%	7.2%

D2 high residues 462-596

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_004940266__Saimiriine_betaherpesvirus_4__1535247__D509-572_638-677

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	104.9	4.50e-30	100.0%	18.6%

D3 medium residues 41-101

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	92.9	2.00e-26	100.0%	7.8%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3bm4A00	3.90.79.10	Alpha Beta › Alpha-Beta Complex › Nucleoside Triphosphate Pyrophosphohydrolase › Nucleoside Triphosphate Pyrophosphohydrolase	0.55	44.0	3.12e-01	88.5%	90.4%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3776884	109.4.1.109 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › Sel1	0.51	41.0	2.54e-01	100.0%	33.8%

D4 medium residues 102-274

PDB

Domain cluster: rep: ORF35__NP_733888__Callitrichine_gammaherpesvirus_3__106331__D45-78_114-298

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	272.7	8.40e-81	100.0%	21.7%

D5 medium residues 370-440

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009252281__Canid_alphaherpesvirus_1__170325__D443-504

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	95.5	3.20e-27	100.0%	9.0%

D6 medium residues 441-461_597-707

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009010991__Chimpanzee_herpesvirus_strain_105640__332937__D496-582_686-776

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	133.5	1.00e-38	84.1%	13.6%