helicase-primase_helicase_subunit

Euk-Vir

Suid_alphaherpesvirus_1

helicase-primase_helicase_subunit__YP_068371__Suid_alphaherpesvirus_1__10345

Identity

82.7 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Varicellovirus› Suid_alphaherpesvirus_1

TaxID: 10345

View cluster (90 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 67-94_209-236

PDB

Domain cluster: representative

Pfam (3)

Accession	Name	Score	E-value	Q cov	HMM cov
PF06414.19 best	Zeta_toxin	23.0	6.80e-05	82.1%	17.1%
PF02689.21	Herpes_Helicase	38.3	6.20e-10	57.1%	3.7%
PF02689.21	Herpes_Helicase	36.9	1.70e-09	53.6%	3.5%

D2 medium residues 328-393

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	88.3	4.90e-25	100.0%	7.7%

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1xjuA00	1.10.530.40	Mainly Alpha › Orthogonal Bundle › Lysozyme ›	0.54	41.0	3.15e-01	81.8%	38.5%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3930360	109.54.1.14 ↗	alpha superhelices › Repetitive alpha hairpins › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › C-terminal tetramerization domain of Utp1/Utp21/Utp12/Utp13 › DUF7951	0.53	45.0	3.17e-01	100.0%	64.1%

D3 medium residues 467-489_644-729

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_009137079__Human_alphaherpesvirus_1__10298__D496-518_696-779

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	48.9	3.80e-13	79.8%	10.2%

D4 medium residues 490-557_601-643

PDB

Domain cluster: rep: helicase-primase_helicase_subunit__YP_004940266__Saimiriine_betaherpesvirus_4__1535247__D509-572_638-677

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02689.21 best	Herpes_Helicase	39.3	3.10e-10	67.6%	7.5%