←Back to structures
helicase-primase_helicase_subunit
Euk-VirHuman_betaherpesvirus_5
helicase-primase_helicase_subunit__YP_081551__Human_betaherpesvirus_5__10359
Identity
- Accession:
- YP_081551 ↗
- Protein ID:
- helicase-primase_helicase_subunit
- Kingdom:
- euk
Quality
75.8
mean pLDDT
Taxonomy
Heunggongvirae›
Peploviricota›
Herviviricetes›
Herpesvirales›
Orthoherpesviridae›
Cytomegalovirus›
Human_betaherpesvirus_5
TaxID: 10359
Cluster
View cluster (90 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 26-46_100-146
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02689.21 best | Herpes_Helicase | 64.8 | 6.00e-18 | 100.0% | 9.9% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2itmB02 | 3.30.420.40 | Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain | 0.53 | 47.0 | 3.25e-01 | 100.0% | 38.5% |
D2
medium
residues 147-171_269-294
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02689.21 best | Herpes_Helicase | 28.9 | 4.40e-07 | 54.9% | 3.2% |
D3
medium
residues 378-431_883-936
Domain cluster:
rep: helicase-primase_ATPase_subunit__YP_010087484__Phascolarctid_gammaherpesvirus_1__2249313__D338-366_706-759
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02689.21 best | Herpes_Helicase | 82.6 | 2.60e-23 | 51.8% | 6.4% |
| PF02689.21 | Herpes_Helicase | 70.7 | 9.80e-20 | 51.8% | 6.6% |
D4
medium
residues 432-500_543-555_851-882
Domain cluster:
rep: helicase-primase_helicase_subunit__NP_045354__Bovine_alphaherpesvirus_1__10320__D392-469_736-760
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02689.21 best | Herpes_Helicase | 66.1 | 2.50e-18 | 72.8% | 9.4% |
| PF02689.21 | Herpes_Helicase | 36.0 | 3.10e-09 | 28.9% | 4.0% |
D5
medium
residues 556-576_768-850
Domain cluster:
rep: helicase-primase_helicase_subunit__YP_009137079__Human_alphaherpesvirus_1__10298__D496-518_696-779
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02689.21 best | Herpes_Helicase | 85.5 | 3.40e-24 | 81.7% | 10.2% |