helicase-primase_primase_subunit

Euk-Vir

Aotine_betaherpesvirus_1

helicase-primase_primase_subunit__YP_004940086__Aotine_betaherpesvirus_1__50290

Identity

86.2 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Cytomegalovirus› Aotine_betaherpesvirus_1

TaxID: 50290

View cluster (58 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 781-909

PDB

Domain cluster: rep: helicase-primase_primase_subunit__NP_944382__Psittacid_alphaherpesvirus_1__50294__D1138-1286

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03121.21 best	Herpes_UL52	72.2	3.50e-20	59.7%	92.0%

D2 medium residues 1-142

PDB

Domain cluster: rep: helicase-primase_primase_subunit__YP_010085930__Wood_mouse_herpesvirus__432370__D12-162

D3 medium residues 143-215

PDB

Domain cluster: rep: helicase_primase_complex__NP_050224__Human_betaherpesvirus_6B__32604__D142-241

D4 medium residues 216-285

PDB

Domain cluster: rep: E70__YP_007016467__Murid_betaherpesvirus_8__1261657__D218-274

D5 medium residues 298-337_532-559_586-611_684-710_745-766

PDB

Domain cluster: representative

D6 medium residues 338-406

PDB

Domain cluster: rep: helicase_primase_complex_protein__NP_042936__Human_betaherpesvirus_6A__32603__D343-410

D7 medium residues 407-495

PDB

Domain cluster: rep: helicase_primase_complex_protein__NP_042936__Human_betaherpesvirus_6A__32603__D324-341_421-483

D8 medium residues 496-531_612-683

PDB

Domain cluster: rep: helicase-primase_primase_subunit__NP_612703__Panine_betaherpesvirus_2__188763__D309-328_686-749

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2iruA02	3.30.70.3300	Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits ›	0.65	56.0	5.21e-01	95.4%	92.8%
2m3aA00	1.10.10.1900	Mainly Alpha › Orthogonal Bundle › Arc Repressor Mutant, subunit A › Knl-2 Myb-like DNA-binding domain-like	0.57	32.0	3.85e-01	82.4%	86.6%
4at7A01	1.10.1410.40	Mainly Alpha › Orthogonal Bundle › Poly(a)-polymerase, middle domain ›	0.53	40.0	3.44e-01	81.5%	74.7%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3511345	70.3.1.1 ↗	beta barrels › beta-clip › SET domain-like › SET domain-like › SET	0.50	38.0	3.00e-01	81.5%	45.0%