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helicase-primase_primase_subunit

Euk-Vir

Columbid_alphaherpesvirus_1

helicase-primase_primase_subunit__YP_009352963__Columbid_alphaherpesvirus_1__93386

Identity

Accession:
YP_009352963 ↗
Protein ID:
helicase-primase_primase_subunit
Kingdom:
euk

Quality

74.2 mean pLDDT

Taxonomy

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Mardivirus› Columbid_alphaherpesvirus_1

TaxID: 93386

Cluster

View cluster (58 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 982-1116
PDB
Domain cluster: rep: helicase-primase_primase_subunit__NP_944382__Psittacid_alphaherpesvirus_1__50294__D1138-1286
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF03121.21 best Herpes_UL52 83.3 1.30e-23 58.5% 96.0%
D2 medium residues 21-68_110-201_216-255
PDB
Domain cluster: rep: helicase-primase_primase_subunit__YP_010085930__Wood_mouse_herpesvirus__432370__D12-162
D3 medium residues 256-373
PDB
Domain cluster: rep: helicase_primase_complex__NP_050224__Human_betaherpesvirus_6B__32604__D142-241
D4 medium residues 374-447
PDB
Domain cluster: rep: helicase-primase_primase_subunit__YP_009046553__Falconid_herpesvirus_1__1510155__D359-435
D5 medium residues 448-469_826-897_943-981
PDB
Domain cluster: representative
D6 medium residues 470-500_572-615_654-681
PDB
Domain cluster: rep: helicase-primase_primase_subunit__YP_182338__Gallid_alphaherpesvirus_1__10386__D431-468_522-592_634-660
D7 medium residues 682-742
PDB
Domain cluster: representative
ECOD (1)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3963133 2003.1.1.20 ↗ a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › Epimerase 0.56 48.0 3.02e-01 100.0% 81.9%