helicase-primase_primase_subunit

Euk-Vir

Cercopithecine_alphaherpesvirus_2

helicase-primase_primase_subunit__YP_164496__Cercopithecine_alphaherpesvirus_2__10317

Identity

73.6 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Cercopithecine_alphaherpesvirus_2

TaxID: 10317

View cluster (58 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 922-1033

PDB

Domain cluster: rep: helicase-primase_primase_subunit__NP_944382__Psittacid_alphaherpesvirus_1__50294__D1138-1286

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF03121.21 best	Herpes_UL52	77.3	9.50e-22	68.8%	94.7%

D2 medium residues 11-165_185-222

PDB

Domain cluster: rep: helicase-primase_primase_subunit__YP_010085930__Wood_mouse_herpesvirus__432370__D12-162

D3 medium residues 223-405

PDB

D4 medium residues 439-470_507-608_812-828

PDB

Domain cluster: rep: helicase-primase_primase_subunit__YP_182338__Gallid_alphaherpesvirus_1__10386__D431-468_522-592_634-660

CATH (1)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2cpmA00	3.30.1370.50	Alpha Beta › 2-Layer Sandwich › Ribosomal Protein S8; Chain: A, domain 1 › R3H-like domain	0.50	23.0	2.79e-01	95.4%	63.8%

ECOD (1)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
4944581	223.2.1.0 ↗	a+b three layers › Profilin-like › profilin-like › profilin-like	0.52	26.0	3.20e-01	94.7%	73.7%

D5 medium residues 609-678_749-811_829-884

PDB

Domain cluster: rep: NTPase,_DNA_primase__YP_009408038__Eptesipox_virus__1329402__D10-229