helicase-primase_subunit

Euk-Vir

Ateline_alphaherpesvirus_1

helicase-primase_subunit__YP_009361930__Ateline_alphaherpesvirus_1__35243

Identity

81.5 mean pLDDT

Heunggongvirae› Peploviricota› Herviviricetes› Herpesvirales› Orthoherpesviridae› Simplexvirus› Ateline_alphaherpesvirus_1

TaxID: 35243

View cluster (61 members)

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high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 15-163_293-329

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009010994__Chimpanzee_herpesvirus_strain_105640__332937__D1-146_230-250_272-307

D2 medium residues 164-179_216-292_330-357

PDB

Domain cluster: rep: helicase-primase_subunit__YP_009010994__Chimpanzee_herpesvirus_strain_105640__332937__D147-229_251-271_308-352

CATH (3)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3kksB00	3.30.420.10	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › Ribonuclease H-like superfamily/Ribonuclease H	0.54	38.0	3.57e-01	99.2%	58.6%
2bs6A01	2.40.128.190	Mainly Beta › Beta Barrel › Lipocalin ›	0.51	24.0	2.83e-01	92.6%	60.7%
2qi2A02	3.30.420.60	Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › eRF1 domain 2	0.51	41.0	4.20e-01	100.0%	91.2%

ECOD (3)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
2575628	2484.1.1.9 ↗	mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › rve	0.54	38.0	3.49e-01	97.5%	56.2%
4883226	5.1.3.21 ↗	beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Fungal_lectin	0.52	25.0	2.83e-01	71.1%	57.0%
3602240	2.4.1.0 ↗	beta barrels › OB-fold › MOP-like › MOP-like	0.50	20.0	2.46e-01	90.9%	52.9%

D3 medium residues 358-452_465-513

PDB

Domain cluster: representative

CATH (5)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3mvpA02	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.55	35.0	3.45e-01	84.0%	59.7%
3bhgA01	1.10.275.10	Mainly Alpha › Orthogonal Bundle › Fumarase C; Chain B, domain 1 › Fumarase/aspartase (N-terminal domain)	0.53	25.0	2.79e-01	78.5%	53.0%
1w0bA01	1.20.58.420	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › AHSP	0.53	33.0	3.93e-01	91.7%	94.6%
1sxjB03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.51	26.0	3.18e-01	84.0%	76.1%
2f07B00	1.10.357.10	Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2	0.50	32.0	2.96e-01	90.3%	47.4%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3904779	3922.1.1.0 ↗	alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3	0.54	29.0	3.29e-01	93.1%	67.3%
3208922	6155.1.1.7 ↗	alpha duplicates or obligate multimers › TOG superfamily › SWEET transporter › SWEET transporter › CLPTM1	0.52	30.0	3.25e-01	91.0%	64.8%