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helicase_2
Euk-VirPeridroma_alphabaculovirus
helicase_2__YP_009049868__Peridroma_alphabaculovirus__1346829
Identity
- Accession:
- YP_009049868 ↗
- Protein ID:
- helicase_2
- Kingdom:
- euk
Quality
83.9
mean pLDDT
Taxonomy
TaxID: 1346829
Cluster
View cluster (35 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 24-181_418-440
Domain cluster:
rep: MK064563__AZI75768.1__SBFV2-gp01__00001__D223-383
Pfam (4)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF05970.21 best | PIF1 | 92.3 | 4.90e-26 | 94.5% | 73.1% |
| PF13604.13 | AAA_30 | 43.9 | 3.20e-11 | 82.9% | 60.2% |
| PF13245.13 | AAA_19 | 47.7 | 2.60e-12 | 70.2% | 89.5% |
| PF13401.13 | AAA_22 | 27.1 | 6.30e-06 | 67.4% | 79.2% |
D2
high
residues 223-397
Domain cluster:
rep: helicase-2__YP_003429432__Artogeia_rapae_granulovirus__362830__D268-377
D3
medium
residues 186-222_398-417
Domain cluster:
representative
CATH (2)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 6rloK01 | 1.10.1450.10 | Mainly Alpha › Orthogonal Bundle › Cd81 Antigen, Extracellular Domain; Chain: A › Tetraspanin | 0.62 | 44.0 | 4.04e-01 | 75.4% | 84.0% |
| 2dpmA02 | 1.10.1020.10 | Mainly Alpha › Orthogonal Bundle › Adenine-specific Methyltransferase; domain 2 › Adenine-specific Methyltransferase, Domain 2 | 0.57 | 45.0 | 3.78e-01 | 89.5% | 91.3% |
ECOD (2)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3360186 | 109.4.1.883 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat › PPR+PPR_2 | 0.56 | 39.0 | 2.82e-01 | 98.2% | 22.6% |
| 3688141 | 109.4.1.0 ↗ | alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat | 0.54 | 41.0 | 2.89e-01 | 98.2% | 24.6% |