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helicase_2
Euk-VirTipula_oleracea_nudivirus
helicase_2__YP_009116752__Tipula_oleracea_nudivirus__1546257
Identity
- Accession:
- YP_009116752 ↗
- Protein ID:
- helicase_2
- Kingdom:
- euk
Quality
55.2
mean pLDDT
Taxonomy
TaxID: 1546257
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 58-89_121-285
D2
medium
residues 289-366_499-547
Domain cluster:
rep: helicase_2__YP_010087709__Homarus_gammarus_nudivirus__2509616__D258-315_421-469
CATH (26)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3b85A00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 52.0 | 4.52e-01 | 70.9% | 68.4% |
| 7nadx01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.75 | 51.0 | 4.29e-01 | 70.1% | 75.7% |
| 2ykgA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.74 | 51.0 | 4.21e-01 | 70.1% | 70.4% |
| 6l5oA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.73 | 50.0 | 4.24e-01 | 70.1% | 74.5% |
| 1pjrA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 50.0 | 4.23e-01 | 70.9% | 73.3% |
| 4w7sA01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.72 | 51.0 | 3.97e-01 | 73.2% | 80.2% |
| 4zcfC01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 51.0 | 4.04e-01 | 74.8% | 68.5% |
| 1rifA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 49.0 | 4.23e-01 | 70.9% | 68.8% |
| 6jimB01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.70 | 49.0 | 4.69e-01 | 70.9% | 69.2% |
| 3upuA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.68 | 62.0 | 6.20e-01 | 96.9% | 100.0% |
| 3e1sA03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.66 | 61.0 | 5.92e-01 | 100.0% | 90.8% |
| 3euaF01 | 3.40.50.10490 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glucose-6-phosphate isomerase like protein; domain 1 | 0.65 | 45.0 | 4.20e-01 | 70.1% | 62.8% |
| 4nl4H03 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.65 | 45.0 | 3.92e-01 | 71.7% | 70.9% |
| 1z6aA01 | 3.40.50.10810 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Tandem AAA-ATPase domain | 0.64 | 44.0 | 3.73e-01 | 70.1% | 62.1% |
| 3dmnA00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.63 | 59.0 | 5.43e-01 | 100.0% | 87.0% |
| 3vkwA02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 50.0 | 4.85e-01 | 100.0% | 78.2% |
| 3jb9X01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.61 | 55.0 | 4.44e-01 | 96.9% | 71.6% |
| 5rl9B01 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.60 | 57.0 | 5.35e-01 | 100.0% | 91.3% |
| 3sqlA02 | 3.40.50.10870 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Glycosyl hydrolase family 3 | 0.57 | 41.0 | 3.89e-01 | 75.6% | 81.0% |
| 1o9gA01 | 3.40.50.150 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Vaccinia Virus protein VP39 | 0.56 | 40.0 | 3.42e-01 | 72.4% | 64.1% |
| 2yjtD00 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 49.0 | 4.41e-01 | 96.1% | 78.8% |
| 2hyiC02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.55 | 50.0 | 4.55e-01 | 99.2% | 80.8% |
| 2i6jA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.54 | 37.0 | 3.44e-01 | 70.1% | 71.4% |
| 7nadx02 | 3.40.50.300 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases | 0.53 | 37.0 | 3.09e-01 | 71.7% | 46.0% |
| 1w36C01 | 3.40.50.10930 | Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › | 0.52 | 46.0 | 3.86e-01 | 96.9% | 60.8% |
| 4kyqA00 | 3.90.190.10 | Alpha Beta › Alpha-Beta Complex › Protein-Tyrosine Phosphatase; Chain A › Protein tyrosine phosphatase superfamily | 0.52 | 38.0 | 3.31e-01 | 78.0% | 71.8% |
ECOD (54)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3316169 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 72.0 | 4.84e-01 | 100.0% | 50.7% |
| 3242523 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.76 | 67.0 | 6.68e-01 | 96.9% | 90.0% |
| 3648251 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 71.0 | 5.80e-01 | 100.0% | 85.0% |
| 3671414 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.75 | 69.0 | 6.07e-01 | 98.4% | 84.4% |
| 3682236 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.75 | 69.0 | 6.21e-01 | 98.4% | 81.8% |
| 3605939 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.74 | 64.0 | 6.26e-01 | 100.0% | 85.2% |
| 4273731 | 2004.1.1.29 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD | 0.73 | 50.0 | 3.88e-01 | 70.1% | 55.3% |
| 4025922 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.73 | 51.0 | 4.12e-01 | 70.9% | 62.6% |
| 3676955 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.73 | 69.0 | 6.09e-01 | 100.0% | 80.3% |
| 3372829 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.72 | 66.0 | 6.33e-01 | 96.9% | 91.0% |
| 3658525 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.72 | 68.0 | 6.57e-01 | 100.0% | 97.9% |
| 3683589 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.72 | 68.0 | 4.63e-01 | 100.0% | 34.7% |
| 3656784 | 2004.1.1.62 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1 | 0.72 | 68.0 | 5.92e-01 | 100.0% | 76.1% |
| 3372759 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.71 | 67.0 | 5.13e-01 | 100.0% | 54.1% |
| 3680771 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.71 | 67.0 | 5.21e-01 | 100.0% | 53.7% |
| 3682367 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.71 | 66.0 | 6.49e-01 | 98.4% | 99.3% |
| 4429341 | 2004.1.1.496 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Viral_helicase1, UvrD_C_2 | 0.71 | 65.0 | 5.74e-01 | 98.4% | 87.2% |
| 3362146 | 2004.1.1.135 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › PIF1 | 0.71 | 67.0 | 5.64e-01 | 100.0% | 73.5% |
| 3305691 | 2004.1.1.298 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Herpes_Helicase | 0.71 | 66.0 | 6.18e-01 | 100.0% | 86.5% |
| 3511279 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.71 | 65.0 | 5.49e-01 | 96.9% | 86.7% |
| 3219515 | 2004.1.1.23 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › SNF2-rel_dom | 0.70 | 48.0 | 4.01e-01 | 70.9% | 65.5% |
| 3645109 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.69 | 65.0 | 4.07e-01 | 100.0% | 22.6% |
| 3807611 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 64.0 | 5.97e-01 | 100.0% | 87.1% |
| 5049911 | 2007.6.1.4 ↗ | a/b three-layered sandwiches › Flavodoxin-like › Ribosomal protein S2/SIS domain › Ribosomal protein S2/SIS domain › SIS | 0.68 | 47.0 | 3.37e-01 | 70.1% | 28.5% |
| None | — | 0.68 | 61.0 | 5.87e-01 | 96.9% | 93.8% | |
| 3682824 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.68 | 64.0 | 6.25e-01 | 100.0% | 97.0% |
| 3590487 | 2004.1.1.203 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › UvrD_C_2 | 0.67 | 61.0 | 5.82e-01 | 96.9% | 92.4% |
| 3287999 | 2004.1.1.193 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_19 | 0.65 | 56.0 | 4.28e-01 | 89.8% | 68.5% |
| 4939902 | 2003.2.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Formate dehydrogenase/DMSO reductase, domains 2 and 3 › Formate dehydrogenase/DMSO reductase, domains 2 and 3 | 0.63 | 47.0 | 5.04e-01 | 79.5% | 98.2% |
| 3633429 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.63 | 58.0 | 4.65e-01 | 99.2% | 72.3% |
| 3969482 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.62 | 58.0 | 3.73e-01 | 100.0% | 32.5% |
| 3355307 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.61 | 47.0 | 3.32e-01 | 79.5% | 43.0% |
| 3407608 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.60 | 54.0 | 4.56e-01 | 97.6% | 88.3% |
| 3268477 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.59 | 54.0 | 3.53e-01 | 100.0% | 69.4% |
| 4284008 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.59 | 53.0 | 3.62e-01 | 98.4% | 82.0% |
| 3350588 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.58 | 52.0 | 4.35e-01 | 96.1% | 67.6% |
| 3391549 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.57 | 50.0 | 4.23e-01 | 93.7% | 69.8% |
| 3720012 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.57 | 52.0 | 4.43e-01 | 100.0% | 92.7% |
| 3487261 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.57 | 52.0 | 4.47e-01 | 99.2% | 85.6% |
| 3263621 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.57 | 49.0 | 4.11e-01 | 93.7% | 67.4% |
| 3816975 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.57 | 52.0 | 3.50e-01 | 100.0% | 72.3% |
| 3245345 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.56 | 51.0 | 4.72e-01 | 96.9% | 81.9% |
| 3591208 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 50.0 | 4.17e-01 | 94.5% | 63.8% |
| 3729997 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.56 | 51.0 | 3.42e-01 | 100.0% | 83.1% |
| 3439817 | 2004.1.1.186 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_12 | 0.56 | 51.0 | 4.32e-01 | 100.0% | 77.6% |
| 3592397 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 50.0 | 3.76e-01 | 96.1% | 48.8% |
| 3601596 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.56 | 51.0 | 4.38e-01 | 99.2% | 92.8% |
| 4306526 | 2004.1.1.364 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD+Helicase_C | 0.55 | 49.0 | 3.30e-01 | 100.0% | 85.7% |
| 4944065 | 2003.1.1.48 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains › YjeF_N | 0.55 | 41.0 | 3.43e-01 | 78.7% | 74.1% |
| 4013735 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.54 | 49.0 | 3.48e-01 | 96.9% | 81.4% |
| 4124143 | 2004.1.1.30 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › Helicase_C | 0.54 | 50.0 | 4.09e-01 | 100.0% | 78.7% |
| 3785149 | 2004.1.1.0 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases | 0.53 | 47.0 | 4.18e-01 | 100.0% | 68.3% |
| 3214315 | 2003.1.1.0 ↗ | a/b three-layered sandwiches › Rossmann-like › Rossmann-related › NAD(P)-binding Rossmann-fold domains | 0.52 | 39.0 | 3.21e-01 | 79.5% | 87.3% |
| 3207380 | 2004.1.1.189 ↗ | a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_16 | 0.50 | 36.0 | 3.09e-01 | 72.4% | 92.4% |
D3
medium
residues 367-498
Domain cluster:
rep: helicase_2__YP_010087709__Homarus_gammarus_nudivirus__2509616__D316-420
CATH (22)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2lccA00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.76 | 34.0 | 4.55e-01 | 74.2% | 76.3% |
| 3m9qA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 41.0 | 5.47e-01 | 86.4% | 98.6% |
| 4iupA02 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.75 | 40.0 | 5.31e-01 | 99.2% | 95.8% |
| 6s8zA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 35.0 | 5.05e-01 | 78.0% | 98.4% |
| 1uebA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.73 | 35.0 | 5.05e-01 | 78.0% | 98.4% |
| 4h75A00 | 2.80.10.70 | Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › Spindlin/Ssty | 0.72 | 39.0 | 3.37e-01 | 85.6% | 34.7% |
| 7oc3A01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 38.0 | 4.50e-01 | 78.8% | 73.9% |
| 5zwzA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 38.0 | 5.23e-01 | 95.5% | 100.0% |
| 4qqgG00 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 38.0 | 5.09e-01 | 78.8% | 95.8% |
| 3oyyA01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.72 | 35.0 | 4.83e-01 | 78.0% | 93.9% |
| 3a5zB01 | 2.30.30.30 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 34.0 | 4.89e-01 | 78.0% | 98.4% |
| 2fhdA01 | 2.30.30.140 | Mainly Beta › Roll › SH3 type barrels. › | 0.70 | 31.0 | 4.49e-01 | 72.7% | 90.3% |
| 1zq1A01 | 2.30.30.520 | Mainly Beta › Roll › SH3 type barrels. › | 0.68 | 36.0 | 4.53e-01 | 100.0% | 85.7% |
| 1x6gA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.68 | 34.0 | 4.28e-01 | 100.0% | 79.0% |
| 3askA02 | 2.30.30.1150 | Mainly Beta › Roll › SH3 type barrels. › | 0.67 | 36.0 | 3.47e-01 | 78.8% | 46.4% |
| 2v1qA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.67 | 31.0 | 4.61e-01 | 72.7% | 100.0% |
| 4lduA03 | 2.30.30.1040 | Mainly Beta › Roll › SH3 type barrels. › | 0.65 | 35.0 | 4.62e-01 | 75.0% | 100.0% |
| 2kxcA00 | 2.30.30.40 | Mainly Beta › Roll › SH3 type barrels. › SH3 Domains | 0.62 | 29.0 | 3.98e-01 | 72.0% | 88.1% |
| 3kxtA00 | 2.30.30.610 | Mainly Beta › Roll › SH3 type barrels. › Chromatin protein Cren7 | 0.59 | 25.0 | 3.74e-01 | 70.5% | 92.9% |
| 1whlA00 | 2.30.30.190 | Mainly Beta › Roll › SH3 type barrels. › CAP Gly-rich-like domain | 0.56 | 36.0 | 4.25e-01 | 80.3% | 91.6% |
| 1wqsA02 | 2.40.10.10 | Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases | 0.54 | 31.0 | 3.51e-01 | 78.8% | 72.8% |
| 3h96C00 | 2.30.110.10 | Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A | 0.52 | 33.0 | 3.32e-01 | 98.5% | 60.9% |
ECOD (60)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3713334 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.85 | 39.0 | 5.92e-01 | 75.8% | 100.0% |
| 3241817 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.84 | 37.0 | 5.56e-01 | 77.3% | 95.0% |
| 3554026 | 4.1.1.233 ↗ | beta barrels › SH3 › SH3 › SH3 › Myosin_VII_N | 0.84 | 37.0 | 5.65e-01 | 100.0% | 96.7% |
| 3855974 | 4.1.1.253 ↗ | beta barrels › SH3 › SH3 › SH3 › DUF4537 | 0.82 | 40.0 | 5.29e-01 | 78.8% | 84.0% |
| 3704395 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.82 | 40.0 | 5.67e-01 | 84.1% | 98.4% |
| 3936726 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.79 | 34.0 | 5.28e-01 | 75.8% | 100.0% |
| 3347795 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.76 | 40.0 | 5.11e-01 | 97.7% | 85.0% |
| 3484700 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.76 | 37.0 | 4.26e-01 | 100.0% | 63.0% |
| 3826751 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.75 | 38.0 | 4.87e-01 | 99.2% | 82.5% |
| 3410370 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.75 | 38.0 | 5.27e-01 | 78.8% | 95.7% |
| 3306779 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.74 | 35.0 | 5.07e-01 | 78.0% | 95.4% |
| 3265170 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.74 | 35.0 | 5.07e-01 | 78.0% | 95.4% |
| 4201878 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.74 | 35.0 | 5.05e-01 | 78.0% | 95.4% |
| 3441143 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.74 | 39.0 | 4.48e-01 | 98.5% | 69.0% |
| 3608236 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.73 | 36.0 | 5.11e-01 | 78.0% | 96.9% |
| 165654 | 4.8.1.6 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › Tudor-knot | 0.73 | 37.0 | 4.84e-01 | 99.2% | 86.5% |
| 3812766 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.73 | 38.0 | 5.17e-01 | 100.0% | 97.1% |
| 3416672 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 38.0 | 4.36e-01 | 78.8% | 68.0% |
| 3357709 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 39.0 | 4.92e-01 | 100.0% | 84.7% |
| 3806777 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 38.0 | 5.09e-01 | 97.7% | 93.3% |
| 3183093 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.72 | 41.0 | 4.02e-01 | 99.2% | 53.6% |
| 3815495 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.72 | 35.0 | 4.85e-01 | 100.0% | 91.4% |
| 4446791 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.72 | 34.0 | 4.90e-01 | 78.0% | 95.4% |
| 4982354 | 4.7.1.0 ↗ | beta barrels › SH3 › RNase P subunit p29 › RNase P subunit p29 | 0.72 | 34.0 | 4.80e-01 | 75.0% | 93.8% |
| 4101580 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.71 | 34.0 | 4.88e-01 | 78.0% | 95.4% |
| 4026274 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.71 | 38.0 | 3.79e-01 | 78.8% | 50.0% |
| 3550699 | 4.8.1.10 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › MSL3_chromo-like | 0.71 | 37.0 | 4.37e-01 | 100.0% | 71.6% |
| 4146937 | 4.1.1.57 ↗ | beta barrels › SH3 › SH3 › SH3 › EFP_N | 0.71 | 34.0 | 4.84e-01 | 78.0% | 95.4% |
| 4674170 | 4.1.1.17 ↗ | beta barrels › SH3 › SH3 › SH3 › Ribosomal_L19 | 0.71 | 43.0 | 4.54e-01 | 88.6% | 67.5% |
| 3595833 | 4.8.1.0 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like | 0.70 | 36.0 | 4.27e-01 | 100.0% | 70.5% |
| 3358748 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.70 | 40.0 | 5.18e-01 | 98.5% | 96.2% |
| 3322460 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.69 | 41.0 | 4.36e-01 | 98.5% | 67.0% |
| 4466506 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.69 | 38.0 | 4.94e-01 | 78.0% | 94.7% |
| 3921963 | 4.1.1.140 ↗ | beta barrels › SH3 › SH3 › SH3 › Pif1_2B_dom | 0.69 | 63.0 | 6.29e-01 | 100.0% | 94.1% |
| 3650296 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.69 | 40.0 | 4.70e-01 | 99.2% | 81.1% |
| 3830352 | 4.1.1.94 ↗ | beta barrels › SH3 › SH3 › SH3 › SAWADEE | 0.69 | 40.0 | 5.00e-01 | 98.5% | 91.8% |
| 2978978 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.68 | 36.0 | 4.70e-01 | 100.0% | 92.0% |
| 3582834 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.67 | 43.0 | 5.02e-01 | 95.5% | 89.5% |
| 3913637 | 4.1.1.31 ↗ | beta barrels › SH3 › SH3 › SH3 › Spin-Ssty | 0.67 | 36.0 | 4.30e-01 | 98.5% | 75.6% |
| 3519122 | 4.31.1.1 ↗ | beta barrels › SH3 › Central WYL domain of RspWYL1 › Central WYL domain of RspWYL1 › WYL | 0.66 | 39.0 | 4.64e-01 | 97.7% | 85.6% |
| 3675120 | 4.1.1.42 ↗ | beta barrels › SH3 › SH3 › SH3 › Agenet | 0.66 | 40.0 | 4.89e-01 | 87.1% | 92.9% |
| 3934278 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.65 | 38.0 | 4.13e-01 | 78.8% | 67.0% |
| 5058926 | 4.6.1.0 ↗ | beta barrels › SH3 › PRC-barrel domain › PRC-barrel domain | 0.65 | 33.0 | 4.30e-01 | 75.8% | 86.7% |
| 4930890 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.64 | 31.0 | 3.93e-01 | 98.5% | 78.7% |
| 3608011 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.63 | 39.0 | 4.14e-01 | 97.0% | 69.2% |
| 3646890 | 4.25.1.1 ↗ | beta barrels › SH3 › Auxin response factor dimerization domain and ancillary domain › Auxin response factor dimerization domain and ancillary domain › Auxin_resp | 0.60 | 38.0 | 4.60e-01 | 96.2% | 98.8% |
| 4366483 | 1.1.7.17 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › ATP-synt_ab_N | 0.59 | 30.0 | 3.57e-01 | 99.2% | 71.8% |
| 3939175 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.58 | 35.0 | 3.37e-01 | 99.2% | 52.7% |
| 3710913 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 37.0 | 3.93e-01 | 78.8% | 73.3% |
| 3520654 | 4.1.1.187 ↗ | beta barrels › SH3 › SH3 › SH3 › DIRP | 0.55 | 41.0 | 3.98e-01 | 98.5% | 69.3% |
| 3738161 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.54 | 34.0 | 3.54e-01 | 98.5% | 65.6% |
| 4470603 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.54 | 36.0 | 3.32e-01 | 74.2% | 53.3% |
| 3894729 | 4.1.1.461 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH | 0.54 | 34.0 | 4.08e-01 | 100.0% | 93.3% |
| 4114383 | 4.8.1.47 ↗ | beta barrels › SH3 › Chromo domain-like › Chromo domain-like › zf_CCCH_4 | 0.53 | 32.0 | 3.94e-01 | 72.7% | 94.1% |
| 4530545 | 4.1.1.217 ↗ | beta barrels › SH3 › SH3 › SH3 › zf-CCCH_4 | 0.53 | 33.0 | 3.83e-01 | 74.2% | 86.3% |
| 3925069 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.51 | 45.0 | 4.48e-01 | 99.2% | 88.6% |
| 3704929 | 4.18.1.1 ↗ | beta barrels › SH3 › Plus3 › Plus3 › Plus-3 | 0.51 | 34.0 | 3.24e-01 | 97.0% | 58.0% |
| 3718969 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.51 | 40.0 | 3.57e-01 | 80.3% | 78.3% |
| 3717986 | 148.1.3.0 ↗ | alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain | 0.50 | 40.0 | 4.30e-01 | 93.9% | 96.5% |
| 3627688 | 4.1.1.319 ↗ | beta barrels › SH3 › SH3 › SH3 › SH3_Hsr9 | 0.50 | 45.0 | 4.33e-01 | 100.0% | 84.7% |
D4
medium
residues 548-597
D5
medium
residues 762-812