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helicase

Euk-Vir

Clostera_anastomosis_granulovirus_Henan

helicase__YP_008720025__Clostera_anastomosis_granulovirus_Henan__1986291

Identity

Accession:: YP_008720025 ↗
Protein ID:: helicase
Kingdom:: euk

Quality

77.1 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Betabaculovirus› Clostera_anastomosis_granulovirus_Henan

TaxID: 1986291

Cluster

View cluster (45 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 1017-1124

PDB

Domain cluster: rep: helicase__YP_009552640__Operophtera_brumata_nucleopolyhedrovirus__1046267__D1095-1177

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	93.8	8.10e-27	99.1%	9.3%

D2 medium residues 1-152_233-244

PDB

Domain cluster: rep: DNA_helicase__YP_008378412__Choristoneura_rosaceana_nucleopolyhedrovirus__58094__D1-62_93-207

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	109.3	1.70e-31	97.6%	13.9%

D3 medium residues 153-232

PDB

Domain cluster: rep: DNA_helicase__YP_009666413__Lonomia_obliqua_multiple_nucleopolyhedrovirus__134394__D195-285

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	36.0	2.40e-09	100.0%	6.2%

D4 medium residues 273-417

PDB

Domain cluster: rep: DNA-helicase-2__YP_009182280__Diatraea_saccharalis_granulovirus__1675862__D269-385

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	114.7	4.20e-33	97.2%	11.7%

D5 medium residues 528-624_733-753

PDB

Domain cluster: rep: helicase-1__YP_009330209__Plodia_interpunctella_granulovirus__262175__D531-608_714-735

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	59.0	2.60e-16	94.9%	7.4%

D6 medium residues 625-732

PDB

Domain cluster: representative

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	68.7	3.00e-19	100.0%	9.6%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1sxjB03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.63	37.0	3.93e-01	73.1%	66.3%
2ex3B02	1.20.1270.230	Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › DNA terminal protein Gp3, priming domain	0.59	41.0	4.58e-01	85.2%	95.1%
7dfeA01	1.10.274.60	Mainly Alpha › Orthogonal Bundle › Enzyme I; Chain A, domain 2 › Spidroin, repetitive domain	0.59	37.0	3.51e-01	75.0%	52.0%
1sxjE03	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.57	33.0	3.49e-01	72.2%	61.9%
1ug7A00	1.20.120.360	Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Axin interactor, dorsalization-associated protein, N-terminal domain	0.52	38.0	3.66e-01	78.7%	64.8%
1jr3C02	1.20.272.10	Mainly Alpha › Up-down Bundle › Zinc Finger, Delta Prime; domain 3 ›	0.52	36.0	3.55e-01	72.2%	68.9%

ECOD (7)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3874860	611.12.1.1 ↗	alpha bundles › N-cbl like › Izumo sperm-egg fusion protein 1 N-terminal domain › Izumo sperm-egg fusion protein 1 N-terminal domain › IZUMO	0.58	48.0	4.30e-01	89.8%	81.3%
3521643	611.12.1.1 ↗	alpha bundles › N-cbl like › Izumo sperm-egg fusion protein 1 N-terminal domain › Izumo sperm-egg fusion protein 1 N-terminal domain › IZUMO	0.57	47.0	4.42e-01	89.8%	87.4%
3807209	148.1.3.56 ↗	alpha arrays › Histone-like › Histone-related › AAA+ ATPase lid domain › Arv1	0.56	46.0	3.89e-01	88.0%	64.6%
4995712	142.1.1.0 ↗	alpha complex topology › Sigma2 domain-like › Sigma2 domain of RNA polymerase sigma factors › Sigma2 domain of RNA polymerase sigma factors	0.56	39.0	4.17e-01	83.3%	83.2%
3315232	611.7.1.8 ↗	alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › RPW8	0.54	44.0	4.02e-01	86.1%	73.6%
3378402	611.7.1.0 ↗	alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain	0.54	44.0	4.08e-01	87.0%	85.9%
3685745	611.7.1.0 ↗	alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain	0.54	43.0	4.29e-01	85.2%	96.4%

D7 medium residues 754-824_981-1016

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF04735.17 best	Baculo_helicase	106.9	9.50e-31	69.2%	5.7%
PF04735.17	Baculo_helicase	34.0	9.40e-09	36.4%	2.9%

CATH (6)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3ejbH02	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.61	44.0	3.33e-01	74.8%	79.4%
3nc3B00	1.10.630.10	Mainly Alpha › Orthogonal Bundle › Cytochrome p450 › Cytochrome P450	0.61	44.0	3.02e-01	75.7%	75.1%
2wcjA00	1.10.238.20	Mainly Alpha › Orthogonal Bundle › Recoverin; domain 1 › Pheromone/general odorant binding protein domain	0.57	35.0	3.22e-01	73.8%	46.1%
1su0B00	3.90.1010.10	Alpha Beta › Alpha-Beta Complex › Sufe protein. Chain: A ›	0.52	36.0	3.40e-01	72.0%	77.9%
5nx5B00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.52	46.0	3.41e-01	100.0%	58.6%
2qbyA01	1.10.8.60	Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 ›	0.51	39.0	3.96e-01	93.5%	83.5%

ECOD (2)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3542152	397.7.1.7 ↗	few secondary structure elements › Toxic hairpin › Ribosome-inactivating protein luffin P1 › Ribosome-inactivating protein luffin P1 › BSMAP	0.57	36.0	3.83e-01	74.8%	73.3%
4943370	2004.1.1.0 ↗	a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases	0.51	41.0	2.81e-01	89.7%	72.8%