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hemagglutinin-neuraminidase

Euk-Vir

Tuhoko_virus_3

hemagglutinin-neuraminidase__YP_009094079__Tuhoko_virus_3__798074

Identity

Accession:
YP_009094079 ↗
Protein ID:
hemagglutinin-neuraminidase
Kingdom:
euk

Quality

80.8 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Pararubulavirus› Tuhoko_virus_3

TaxID: 798074

Cluster

View cluster (61 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 159-172_481-582
PDB
Domain cluster: rep: attachment_glycoprotein__YP_009094086__Cedar_virus__1221391__D199-232_532-622
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 44.1 1.50e-11 94.0% 16.9%
CATH (25)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.92 88.0 5.66e-01 100.0% 94.6%
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.85 81.0 5.25e-01 100.0% 93.3%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.83 79.0 5.15e-01 100.0% 93.3%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.80 77.0 5.04e-01 100.0% 98.5%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.78 74.0 4.88e-01 100.0% 96.4%
1q47A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 57.0 3.70e-01 87.9% 20.0%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.70 53.0 3.84e-01 87.9% 29.5%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.69 63.0 4.35e-01 98.3% 98.1%
2xziA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.68 62.0 4.28e-01 100.0% 96.9%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.67 61.0 4.21e-01 100.0% 92.3%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.67 60.0 4.19e-01 100.0% 92.6%
1eurA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.66 61.0 4.24e-01 100.0% 97.8%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.64 54.0 3.48e-01 87.9% 21.9%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 58.0 4.00e-01 100.0% 98.2%
4k3yC00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 57.0 4.08e-01 100.0% 94.1%
1iz6A01 2.30.30.30 Mainly Beta › Roll › SH3 type barrels. › 0.62 32.0 4.03e-01 99.1% 82.6%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.60 49.0 3.51e-01 87.9% 41.6%
1y8cA02 2.20.25.110 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › S-adenosyl-L-methionine-dependent methyltransferases 0.60 32.0 4.30e-01 100.0% 100.0%
6x05A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 47.0 3.27e-01 87.9% 27.6%
3oc4B03 3.30.390.30 Alpha Beta › 2-Layer Sandwich › Enolase-like; domain 1 › FAD/NAD-linked reductase, C-terminal dimerisation domain 0.53 29.0 2.90e-01 100.0% 48.8%
4dkmA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 38.0 3.11e-01 74.1% 68.1%
2dd7A00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.53 37.0 3.02e-01 70.7% 66.4%
2wiqA00 2.40.155.10 Mainly Beta › Beta Barrel › Green Fluorescent Protein › Green fluorescent protein 0.51 39.0 3.19e-01 81.0% 77.8%
2hhiA01 3.30.565.40 Alpha Beta › 2-Layer Sandwich › Heat Shock Protein 90 › Fervidobacterium nodosum Rt17-B1 like 0.50 40.0 4.02e-01 87.9% 83.1%
1jkgA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.50 39.0 3.69e-01 82.8% 77.7%
ECOD (48)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
1563144 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.91 88.0 5.54e-01 100.0% 86.2%
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.87 84.0 5.28e-01 100.0% 85.6%
4889672 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.84 81.0 5.24e-01 100.0% 92.2%
1112626 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.84 81.0 5.21e-01 100.0% 92.0%
2833528 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.80 77.0 4.86e-01 100.0% 82.7%
2527935 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.80 75.0 4.93e-01 100.0% 95.1%
1519176 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.78 74.0 4.87e-01 100.0% 96.2%
3062082 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.78 73.0 4.79e-01 100.0% 93.5%
3062081 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.77 73.0 4.78e-01 100.0% 94.2%
4861416 5.1.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 0.73 53.0 3.66e-01 87.9% 23.8%
2093820 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.73 68.0 4.52e-01 100.0% 92.9%
4881991 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.73 68.0 4.49e-01 100.0% 91.6%
4030728 5.1.4.661 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR36-Utp21_1st 0.70 47.0 3.26e-01 87.9% 21.4%
3709267 5.1.2.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.69 57.0 4.01e-01 87.9% 32.1%
4940718 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 57.0 3.95e-01 87.9% 55.6%
5015089 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 51.0 4.00e-01 87.9% 37.1%
4879141 5.1.3.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.68 61.0 4.24e-01 100.0% 92.2%
2702071 5.1.3.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.68 61.0 4.23e-01 100.0% 91.2%
3518499 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.67 51.0 3.83e-01 87.9% 33.0%
2672137 5.1.3.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.67 60.0 4.17e-01 100.0% 92.3%
3702545 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.67 60.0 4.02e-01 97.4% 82.8%
3110491 5.1.3.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.66 60.0 4.14e-01 100.0% 92.8%
3017638 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.66 60.0 3.96e-01 100.0% 85.8%
4330094 330.4.1.1 ↗ a+b two layers › dsRBD-like › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobilinogen deaminase (hydroxymethylbilane synthase), C-terminal domain › Porphobil_deamC 0.65 34.0 3.89e-01 84.5% 66.7%
5070777 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 53.0 3.63e-01 87.9% 38.0%
3681726 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.65 49.0 3.53e-01 80.2% 38.2%
3409291 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.65 54.0 3.46e-01 87.9% 21.0%
5055711 5.1.4.43 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP_3 0.64 52.0 3.66e-01 87.9% 38.4%
1196318 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.64 58.0 3.93e-01 100.0% 94.1%
3537640 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.63 52.0 3.60e-01 87.9% 34.4%
3364229 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 48.0 3.50e-01 80.2% 37.7%
3459413 5.1.4.39 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ANAPC4_WD40 0.62 48.0 3.25e-01 87.9% 23.5%
5022323 4.1.1.0 ↗ beta barrels › SH3 › SH3 › SH3 0.61 35.0 4.52e-01 84.5% 100.0%
3196947 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.61 46.0 2.92e-01 80.2% 20.3%
5000965 512.1.1.0 ↗ a+b two layers › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) › a+b domain in putative modulator of DNA gyrase, PmbA/TldD (Pfam 01523) 0.60 34.0 3.85e-01 81.9% 72.2%
3345244 5.1.8.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › FBA_1 0.60 45.0 4.24e-01 87.9% 64.1%
3490202 5.1.4.55 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › ELYS-bb 0.60 52.0 3.40e-01 96.6% 100.0%
3258445 7089.1.1.0 ↗ a+b two layers › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD › Methane monooxygenase hydroxylase, MmoD 0.60 25.0 3.83e-01 83.6% 100.0%
3626903 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.59 51.0 3.76e-01 96.6% 100.0%
3821607 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.58 44.0 3.15e-01 80.2% 31.6%
3617004 220.1.1.0 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like 0.57 41.0 4.13e-01 100.0% 73.9%
4024738 220.1.1.243 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PF30062 0.57 41.0 4.31e-01 100.0% 81.9%
3217507 243.1.1.98 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › DUF5382_C 0.56 44.0 4.48e-01 82.8% 93.9%
3818615 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.56 42.0 3.07e-01 79.3% 35.2%
3534592 375.1.1.0 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related 0.56 27.0 3.72e-01 90.5% 94.5%
3256845 5.1.4.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40,ANAPC4_WD40 0.54 47.0 3.13e-01 94.8% 63.8%
3165037 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.54 45.0 4.09e-01 87.9% 74.0%
3962890 222.1.1.0 ↗ a+b two layers › Thioesterase/thiol ester dehydrase-isomerase-like › Thioesterase/thiol ester dehydrase-isomerase › Thioesterase/thiol ester dehydrase-isomerase 0.54 35.0 3.43e-01 98.3% 60.8%
D2 medium residues 173-316
PDB
Domain cluster: rep: hemagglutinin-neuraminidase__YP_009094497__Tuhoko_virus_1__798072__D178-291
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 125.2 4.00e-36 100.0% 26.6%
D3 medium residues 317-480
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009508497__Avian_paramyxovirus_14__1928005__D254-485
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 120.0 1.50e-34 100.0% 27.2%