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hemagglutinin-neuraminidase

Euk-Vir

Avian_orthoavulavirus_9

hemagglutinin-neuraminidase__YP_009094363__Avian_orthoavulavirus_9__2560326

Identity

Accession:
YP_009094363 ↗
Protein ID:
hemagglutinin-neuraminidase
Kingdom:
euk

Quality

81.0 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Orthoavulavirus› avian_paramyxovirus_9

TaxID: 2560326

Cluster

View cluster (61 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 131-181_468-571
PDB
Domain cluster: rep: attachment_glycoprotein__YP_009094338__Salem_virus__120499__D206-222_471-620
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 76.9 1.70e-21 65.2% 17.4%
PF00423.27 HN 34.0 1.80e-08 32.9% 9.7%
D2 medium residues 182-237
PDB
Domain cluster: rep: attachment_protein__YP_006347588__Nariva_virus__590647__D242-318
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 67.0 1.80e-18 100.0% 10.3%
D3 medium residues 238-397
PDB
Domain cluster: rep: haemagglutinin_protein__YP_009094449__Porcine_respirovirus_1__1357321__D235-405
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 128.7 3.40e-37 100.0% 27.9%
D4 medium residues 398-467
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 53.8 1.70e-14 100.0% 12.7%
CATH (29)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.98 94.0 5.53e-01 100.0% 15.7%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.93 88.0 5.17e-01 100.0% 16.7%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.89 83.0 4.94e-01 100.0% 16.2%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.88 79.0 4.76e-01 100.0% 16.5%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.86 77.0 4.64e-01 100.0% 16.5%
1mdaH00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.72 45.0 2.82e-01 77.1% 12.0%
1fwxA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 49.0 2.94e-01 72.9% 14.1%
4h5iB00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 50.0 3.21e-01 77.1% 18.6%
4hz9B00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.69 47.0 3.91e-01 70.0% 89.4%
3ci0K01 3.30.1300.30 Alpha Beta › 2-Layer Sandwich › Pantoate--beta-alanine Ligase; Chain: A,domain 2 › GSPII I/J protein-like 0.69 47.0 4.16e-01 71.4% 86.5%
3djwA00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.67 47.0 4.26e-01 74.3% 56.8%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 55.0 3.50e-01 100.0% 19.1%
5jozA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 56.0 3.68e-01 98.6% 83.6%
2h36X00 3.30.160.300 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.62 43.0 3.81e-01 74.3% 49.1%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.60 45.0 2.90e-01 85.7% 30.3%
3jtzA00 3.30.160.390 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Integrase, DNA-binding domain 0.59 38.0 3.70e-01 71.4% 58.4%
3blzA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 46.0 3.89e-01 87.1% 85.5%
4r80A00 3.10.450.630 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.59 44.0 4.35e-01 85.7% 76.3%
4ienA00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.58 46.0 3.65e-01 88.6% 85.1%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 44.0 2.72e-01 85.7% 22.3%
4ojdH01 2.60.98.60 Mainly Beta › Sandwich › Tick-borne Encephalitis virus Glycoprotein; domain 1 › Cell-cell fusogen EFF/AFF, domain 1 0.57 48.0 3.76e-01 98.6% 85.4%
7vd7A01 3.10.450.530 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Ribonuclease toxin, BrnT, of type II toxin-antitoxin system 0.57 44.0 4.11e-01 100.0% 67.4%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.55 38.0 2.46e-01 72.9% 22.0%
6mzoA01 3.40.50.11970 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › 0.54 37.0 3.17e-01 72.9% 49.2%
1ar0A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.54 41.0 3.53e-01 87.1% 84.8%
4h0pA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 36.0 2.64e-01 71.4% 27.9%
4a2bA01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.53 36.0 2.97e-01 71.4% 82.6%
3h51A00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.52 41.0 3.33e-01 87.1% 81.0%
1t6aA02 3.30.310.120 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › Rbstp2229 like protein 0.52 36.0 3.55e-01 94.3% 65.4%
ECOD (30)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.97 93.0 5.38e-01 100.0% 14.4%
1563144 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.93 88.0 5.09e-01 100.0% 15.0%
1112626 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.89 83.0 4.92e-01 100.0% 16.0%
4881991 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.76 68.0 4.07e-01 100.0% 15.5%
3227200 243.1.1.75 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.74 50.0 3.73e-01 70.0% 30.3%
3062081 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.74 65.0 4.00e-01 100.0% 16.3%
3920554 5.1.4.100 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Med16_N 0.70 50.0 2.98e-01 77.1% 12.4%
3289401 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.69 49.0 4.01e-01 75.7% 88.5%
3213695 243.1.1.75 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › PF26530 0.69 46.0 3.80e-01 70.0% 76.9%
3913820 5.1.4.13 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FG-GAP 0.69 49.0 3.09e-01 75.7% 23.1%
4938029 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.68 47.0 4.21e-01 71.4% 68.4%
3378508 5.1.4.231 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › FBA_3 0.66 47.0 3.11e-01 75.7% 19.8%
3438347 5.1.5.63 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › DUF1618 0.66 46.0 3.66e-01 72.9% 47.1%
3409291 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.63 49.0 2.96e-01 85.7% 20.6%
3784765 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 45.0 2.77e-01 75.7% 25.9%
3743943 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.61 48.0 2.95e-01 85.7% 26.3%
3804237 5.1.3.144 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › b-prop_At3g26010-like 0.61 47.0 3.09e-01 87.1% 23.2%
4937915 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.61 41.0 3.72e-01 70.0% 62.6%
3496018 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.60 43.0 2.59e-01 75.7% 15.5%
3436743 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.59 42.0 2.78e-01 75.7% 18.4%
3831169 5.1.5.66 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.59 42.0 2.86e-01 75.7% 25.5%
3463640 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.58 45.0 2.95e-01 87.1% 26.6%
4020590 2008.1.1.99 ↗ a/b three-layered sandwiches › Restriction endonuclease-like › Restriction endonuclease-like › Restriction endonuclease-like › PDDEXK_12 0.58 40.0 2.74e-01 72.9% 26.2%
4176400 274.1.1.0 ↗ a+b two layers › Pili subunits › Pili subunits › Pili subunits 0.58 37.0 3.71e-01 71.4% 61.3%
3644180 5.1.5.98 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › b-prop_At3g26010-like 0.58 46.0 2.94e-01 85.7% 19.7%
3571568 9.15.1.1 ↗ beta barrels › Lipocalins/Streptavidin › TLDC domain of oxidation resistance protein 2 › TLDC domain of oxidation resistance protein 2 › TLD 0.57 40.0 3.23e-01 74.3% 53.8%
3819740 284.1.3.4 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › CCTL2_WNK 0.57 39.0 3.59e-01 74.3% 54.4%
3806993 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.55 39.0 2.76e-01 75.7% 22.9%
3295575 284.1.3.2 ↗ a+b two layers › FKBP-like › FKBP-like › WNK1 autoinhibitory domain › OSR1_C 0.55 38.0 3.47e-01 72.9% 85.0%
4528719 4.1.1.438 ↗ beta barrels › SH3 › SH3 › SH3 › PF27440 0.55 37.0 3.84e-01 71.4% 75.4%