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hemagglutinin-neuraminidase

Euk-Vir

Avian_paramyxovirus_goose_Shimane_67_2000

hemagglutinin-neuraminidase__YP_009255225__Avian_paramyxovirus_goose_Shimane_67_2000__1401445

Identity

Accession:
YP_009255225 ↗
Protein ID:
hemagglutinin-neuraminidase
Kingdom:
euk

Quality

78.8 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Orthoavulavirus› avian_paramyxovirus_13

TaxID: 1401445

Cluster

View cluster (61 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 163-250
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009508497__Avian_paramyxovirus_14__1928005__D160-253_538-557
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 118.8 3.40e-34 100.0% 16.3%
D2 medium residues 251-343_357-567
PDB
Domain cluster: rep: hemagglutinin-neuraminidase_protein__YP_009508497__Avian_paramyxovirus_14__1928005__D254-485
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 282.3 1.00e-83 99.7% 55.6%
CATH (26)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.99 97.0 8.24e-01 100.0% 71.1%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.96 94.0 8.03e-01 100.0% 73.2%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.90 87.0 7.56e-01 100.0% 69.8%
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.87 83.0 7.34e-01 100.0% 72.1%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.85 83.0 7.28e-01 100.0% 73.8%
8gn6A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.79 64.0 6.09e-01 100.0% 73.0%
1b9vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.77 64.0 5.86e-01 100.0% 67.2%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.75 62.0 5.79e-01 98.4% 70.7%
1inyA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.74 65.0 5.88e-01 100.0% 70.4%
2xziA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.69 58.0 5.34e-01 100.0% 68.3%
4nehA01 2.130.10.130 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal 0.69 54.0 4.98e-01 100.0% 63.1%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.68 55.0 5.70e-01 100.0% 88.7%
4qqsB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 55.0 5.46e-01 100.0% 85.3%
1uypA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 53.0 5.49e-01 100.0% 90.8%
3qeeB00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 52.0 5.32e-01 100.0% 84.9%
3vsfC01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 49.0 4.74e-01 92.4% 68.7%
1so7A00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.64 59.0 5.51e-01 100.0% 81.2%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.61 53.0 4.98e-01 100.0% 75.1%
3fgbA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.59 51.0 4.87e-01 99.7% 79.4%
1wnhA01 3.10.450.10 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 17.0 3.09e-01 81.9% 79.0%
6qp9B01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.57 53.0 4.60e-01 100.0% 76.8%
3i2nA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 49.0 4.73e-01 100.0% 80.9%
3iujA02 2.130.10.120 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Prolyl oligopeptidase, N-terminal domain 0.55 46.0 4.50e-01 99.7% 80.3%
6qp7A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.54 50.0 4.28e-01 98.7% 87.9%
2i9wA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.53 23.0 3.05e-01 83.6% 69.9%
3if8B03 6.20.270.10 Special › Other non-globular › Carboxypeptidase Inhibitor; Chain A › 0.53 11.0 2.87e-01 70.1% 96.7%
ECOD (50)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.99 97.0 7.97e-01 100.0% 65.2%
1563144 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.96 94.0 7.72e-01 100.0% 66.1%
4889672 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.91 89.0 7.65e-01 100.0% 69.4%
1112626 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.90 87.0 7.51e-01 100.0% 68.9%
1519176 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.87 84.0 7.39e-01 100.0% 72.2%
2527935 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.85 82.0 7.15e-01 100.0% 70.5%
2833528 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.85 81.0 6.69e-01 100.0% 61.4%
3062082 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.83 80.0 6.96e-01 100.0% 70.2%
2093820 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.82 79.0 6.86e-01 100.0% 70.0%
4881991 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.81 78.0 6.75e-01 100.0% 68.9%
3062081 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.81 78.0 6.77e-01 100.0% 70.9%
2702071 5.1.3.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.78 64.0 5.85e-01 100.0% 66.7%
2672137 5.1.3.3 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Neur 0.77 64.0 5.85e-01 100.0% 66.5%
3709267 5.1.2.33 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › BNR_3 0.72 65.0 6.21e-01 100.0% 82.6%
3804776 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.71 50.0 5.01e-01 99.7% 69.7%
3173622 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.67 55.0 5.20e-01 100.0% 72.1%
3323788 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.67 48.0 4.84e-01 99.7% 71.8%
3457412 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.67 50.0 5.35e-01 100.0% 86.3%
3345244 5.1.8.7 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › putative conserved lipoprotein NT01CX_1156 › FBA_1 0.67 33.0 4.60e-01 80.6% 95.9%
3831169 5.1.5.66 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_1 0.66 49.0 5.17e-01 100.0% 83.3%
3818615 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.66 51.0 5.02e-01 94.4% 73.0%
3440964 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.66 48.0 4.80e-01 100.0% 70.5%
3439915 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.64 49.0 4.97e-01 99.0% 79.0%
3518499 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.64 56.0 5.80e-01 100.0% 97.5%
3364229 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.63 49.0 4.96e-01 99.7% 79.2%
3626903 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.62 48.0 4.76e-01 100.0% 75.6%
3644180 5.1.5.98 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › b-prop_At3g26010-like 0.61 49.0 4.75e-01 100.0% 74.3%
3324058 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.61 51.0 4.71e-01 98.4% 69.3%
3664043 5.1.2.21 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF295 0.61 50.0 5.08e-01 100.0% 86.4%
1318584 5.1.4.418 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Lactonase 0.60 51.0 4.93e-01 100.0% 78.3%
3763650 5.1.4.276 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40, Beta-prop_WDR75_2nd 0.60 51.0 4.86e-01 98.7% 76.3%
4227522 330.6.1.0 ↗ a+b two layers › dsRBD-like › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain › 2-isopropylmalate synthase LeuA, allosteric (dimerisation) domain 0.60 17.0 3.03e-01 91.1% 73.3%
4024327 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.59 51.0 5.08e-01 100.0% 87.0%
2541822 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.59 37.0 4.53e-01 75.3% 97.9%
3507674 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.59 55.0 4.64e-01 99.3% 68.8%
3427602 5.1.3.67 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_1 0.59 48.0 4.82e-01 97.7% 82.9%
3821765 5.1.3.118 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › FBA_3 0.58 51.0 5.00e-01 99.7% 87.2%
3409291 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.58 54.0 4.55e-01 100.0% 63.2%
3834272 5.1.5.96 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › FBA_3 0.57 50.0 5.12e-01 99.0% 94.9%
3936609 5.1.3.176 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › APEH_N 0.56 52.0 4.61e-01 99.0% 78.1%
3537640 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.55 51.0 4.76e-01 98.4% 83.7%
4436162 243.1.1.34 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › YchJ_M-like 0.55 23.0 3.47e-01 83.2% 89.2%
3517705 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.55 51.0 4.38e-01 100.0% 79.0%
4861416 5.1.1.2 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 4-bladed › WD40 0.54 51.0 4.80e-01 98.7% 87.0%
3330702 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.54 45.0 4.42e-01 88.5% 80.3%
4027719 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.53 49.0 4.75e-01 98.4% 88.3%
6689 4210.1.1.1 ↗ a+b two layers › WGR domain › WGR domain › WGR domain › WGR 0.53 22.0 3.28e-01 86.2% 87.3%
3599605 5084.5.1.0 ↗ beta barrels › Outer membrane meander beta-barrels › Porins › Porin 0.53 36.0 3.86e-01 99.7% 78.0%
3725091 5.1.5.93 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_EMC1_N 0.51 47.0 4.11e-01 99.0% 67.7%
3497397 395.1.1.0 ↗ few secondary structure elements › Midkine-related › Midkine-related › Midkine-related 0.51 14.0 2.95e-01 99.7% 97.3%