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hemagglutinin
Euk-VirQuaranjavirus_johnstonense
hemagglutinin__YP_009996582__Quaranjavirus_johnstonense__688437
Identity
- Accession:
- YP_009996582 ↗
- Protein ID:
- hemagglutinin
- Kingdom:
- euk
Quality
61.4
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Insthoviricetes›
Articulavirales›
Orthomyxoviridae›
Quaranjavirus›
Quaranjavirus_johnstonense
TaxID: 688437
Cluster
View cluster (3 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 45-134_152-223
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03273.19 best | Baculo_gp64 | 67.2 | 1.60e-18 | 88.3% | 22.7% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1hq6B00 | 3.50.20.10 | Alpha Beta › 3-Layer(bba) Sandwich › Pyruvoyl-Dependent Histidine Decarboxylase; Chain B › Pyruvoyl-Dependent Histidine Decarboxylase, subunit B | 0.57 | 34.0 | 3.06e-01 | 85.8% | 42.1% |
| 4njcA00 | 3.10.20.730 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › RNAP, epsilon subunit-like | 0.56 | 22.0 | 3.36e-01 | 83.3% | 90.0% |
| 5kfzA04 | 3.30.1490.100 | Alpha Beta › 2-Layer Sandwich › Dna Ligase; domain 1 › DNA polymerase, Y-family, little finger domain | 0.54 | 27.0 | 3.06e-01 | 91.4% | 60.2% |
| 1vwxS01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.53 | 24.0 | 3.44e-01 | 85.2% | 94.4% |
| 4a18X01 | 3.10.20.10 | Alpha Beta › Roll › Ubiquitin-like (UB roll) › | 0.52 | 24.0 | 3.37e-01 | 94.4% | 89.9% |
| 2wliA02 | 2.60.40.1400 | Mainly Beta › Sandwich › Immunoglobulin-like › G protein-activated inward rectifier potassium channel 1 | 0.52 | 28.0 | 2.90e-01 | 74.1% | 52.2% |
| 2zaiA04 | 2.60.40.3030 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 30.0 | 3.33e-01 | 84.0% | 70.5% |
| 2dpkA01 | 2.60.40.2030 | Mainly Beta › Sandwich › Immunoglobulin-like › CalX-beta domain | 0.51 | 24.0 | 2.75e-01 | 89.5% | 55.8% |
| 4c47A01 | 2.60.40.1620 | Mainly Beta › Sandwich › Immunoglobulin-like › Lipoprotein YajI-like | 0.51 | 26.0 | 2.96e-01 | 97.5% | 62.3% |
| 2eyqA05 | 2.40.10.170 | Mainly Beta › Beta Barrel › Thrombin, subunit H › | 0.51 | 19.0 | 2.93e-01 | 87.0% | 86.4% |
ECOD (18)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2124201 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.79 | 71.0 | 7.22e-01 | 93.2% | 100.0% |
| 185186 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.78 | 70.0 | 7.11e-01 | 93.2% | 100.0% |
| 2124211 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.77 | 70.0 | 7.05e-01 | 95.1% | 100.0% |
| 2464208 | 220.3.1.2 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Baculo_gp64 | 0.76 | 69.0 | 6.95e-01 | 94.4% | 100.0% |
| 1503409 | 220.3.1.1 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Rhabdo_glycop | 0.66 | 51.0 | 5.62e-01 | 96.3% | 100.0% |
| 5014244 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.61 | 23.0 | 2.99e-01 | 96.3% | 56.4% |
| 3892842 | 3115.1.1.0 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like | 0.57 | 24.0 | 3.53e-01 | 88.3% | 92.3% |
| 4216863 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 26.0 | 3.35e-01 | 74.1% | 76.5% |
| 1688016 | 220.3.1.3 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 | 0.56 | 49.0 | 4.51e-01 | 93.8% | 96.2% |
| 4456175 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.55 | 31.0 | 2.83e-01 | 75.9% | 38.2% |
| 4128974 | 3115.1.1.1 ↗ | a+b two layers › GP2-like › RplX-like › RplX-like › Ribosomal_L18A | 0.55 | 26.0 | 3.56e-01 | 84.6% | 88.7% |
| 3406669 | 101.1.2.0 ↗ | alpha arrays › HTH › HTH › winged helix domain | 0.55 | 22.0 | 2.70e-01 | 98.8% | 54.0% |
| 2530507 | 220.3.1.3 ↗ | beta barrels › PH domain-like › first barrel domain in viral glycoproteins › first barrel domain in viral glycoproteins › Glycoprot_B_PH1 | 0.55 | 50.0 | 4.49e-01 | 100.0% | 97.3% |
| 3923361 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.54 | 31.0 | 3.08e-01 | 76.5% | 51.4% |
| 3846579 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.53 | 31.0 | 3.09e-01 | 84.6% | 53.5% |
| 4636309 | 5084.1.1.0 ↗ | beta barrels › Outer membrane meander beta-barrels › OMPA-like › OMPA-like | 0.52 | 44.0 | 4.05e-01 | 93.8% | 99.5% |
| 223776 | 3115.4.1.1 ↗ | a+b two layers › GP2-like › Uncharacterized conserved protein Il1583 › Uncharacterized conserved protein Il1583 › DUF1543 | 0.51 | 24.0 | 3.28e-01 | 86.4% | 93.0% |
| 3742696 | 11.1.1.41 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Arrestin_C | 0.51 | 32.0 | 3.20e-01 | 87.7% | 57.1% |