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hemagglutinin_protein
Euk-VirPhocine_morbillivirus
hemagglutinin_protein__YP_009177603__Phocine_morbillivirus__11240
Identity
- Accession:
- YP_009177603 ↗
- Protein ID:
- hemagglutinin_protein
- Kingdom:
- euk
Quality
67.0
mean pLDDT
Taxonomy
Orthornavirae›
Negarnaviricota›
Monjiviricetes›
Mononegavirales›
Paramyxoviridae›
Morbillivirus›
Phocine_morbillivirus
TaxID: 11240
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 193-209_499-607
D2
medium
residues 210-361
Domain cluster:
rep: hemagglutinin-neuraminidase__YP_009094497__Tuhoko_virus_1__798072__D178-291
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00423.27 best | HN | 78.0 | 7.80e-22 | 98.0% | 26.0% |
CATH (24)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2rkcA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.89 | 81.0 | 5.75e-01 | 100.0% | 36.1% |
| 4uf7B00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.78 | 74.0 | 5.24e-01 | 100.0% | 37.1% |
| 2vsmA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.78 | 73.0 | 5.21e-01 | 100.0% | 37.5% |
| 1z4vA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.76 | 70.0 | 4.86e-01 | 100.0% | 32.9% |
| 1e8uA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.75 | 70.0 | 4.89e-01 | 100.0% | 33.6% |
| 1v3eA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.75 | 71.0 | 4.97e-01 | 100.0% | 35.3% |
| 3er7B00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.64 | 31.0 | 3.48e-01 | 82.2% | 56.9% |
| 1ms9A01 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.64 | 58.0 | 4.38e-01 | 100.0% | 49.1% |
| 4irzA01 | 2.130.10.130 | Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › Integrin alpha, N-terminal | 0.61 | 56.0 | 4.03e-01 | 100.0% | 47.1% |
| 7bj4A01 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.61 | 55.0 | 4.13e-01 | 100.0% | 44.3% |
| 2lnjA00 | 3.40.1000.10 | Alpha Beta › 3-Layer(aba) Sandwich › Protein Transport Mog1p; Chain A › Mog1/PsbP, alpha/beta/alpha sandwich | 0.61 | 35.0 | 3.42e-01 | 75.0% | 50.6% |
| 3c7fA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.59 | 53.0 | 4.10e-01 | 100.0% | 61.7% |
| 4kcaA02 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.58 | 52.0 | 3.90e-01 | 100.0% | 57.0% |
| 4mlgG00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 51.0 | 4.01e-01 | 100.0% | 50.6% |
| 3qeeB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.56 | 51.0 | 4.10e-01 | 100.0% | 55.9% |
| 3qc2B00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 50.0 | 3.85e-01 | 100.0% | 65.3% |
| 2w5nA00 | 2.120.10.10 | Mainly Beta › 6 Propeller › Neuraminidase › | 0.55 | 50.0 | 3.81e-01 | 100.0% | 61.1% |
| 1gydB00 | 2.115.10.20 | Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 | 0.55 | 49.0 | 3.92e-01 | 100.0% | 50.2% |
| 2joxA00 | 2.60.40.4240 | Mainly Beta › Sandwich › Immunoglobulin-like › Transcription activator, Churchill | 0.53 | 27.0 | 3.30e-01 | 76.3% | 72.6% |
| 1x7dB01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.51 | 34.0 | 3.33e-01 | 79.6% | 59.2% |
| 4yokA02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.51 | 27.0 | 3.16e-01 | 73.7% | 71.4% |
| 1omoA01 | 3.30.1780.10 | Alpha Beta › 2-Layer Sandwich › ornithine cyclodeaminase, domain 1 › ornithine cyclodeaminase, domain 1 | 0.51 | 34.0 | 3.45e-01 | 79.6% | 67.1% |
| 4boeA00 | 2.40.128.20 | Mainly Beta › Beta Barrel › Lipocalin › Calycin beta-barrel core domain | 0.50 | 36.0 | 3.59e-01 | 96.1% | 70.8% |
| 2jq5A00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.50 | 31.0 | 3.34e-01 | 71.1% | 72.7% |
ECOD (29)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3017638 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.92 | 89.0 | 5.97e-01 | 100.0% | 32.1% |
| 1196318 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.89 | 84.0 | 5.83e-01 | 100.0% | 34.9% |
| 3062082 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.78 | 74.0 | 5.18e-01 | 100.0% | 35.3% |
| 1519176 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.78 | 74.0 | 5.21e-01 | 100.0% | 36.7% |
| 2833528 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.78 | 74.0 | 5.01e-01 | 100.0% | 31.5% |
| 4889672 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.76 | 73.0 | 5.06e-01 | 100.0% | 34.9% |
| 1563144 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.76 | 71.0 | 4.81e-01 | 100.0% | 30.5% |
| 2527935 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.76 | 72.0 | 5.03e-01 | 100.0% | 35.6% |
| 2541822 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.76 | 71.0 | 6.52e-01 | 100.0% | 79.8% |
| 1112626 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.75 | 71.0 | 4.99e-01 | 100.0% | 34.8% |
| 3062081 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.75 | 71.0 | 4.98e-01 | 100.0% | 35.4% |
| 2093820 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.74 | 70.0 | 4.92e-01 | 100.0% | 35.0% |
| 152420 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.74 | 69.0 | 4.71e-01 | 100.0% | 30.9% |
| 4881991 | 5.1.3.5 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN | 0.73 | 69.0 | 4.83e-01 | 100.0% | 34.9% |
| 3744704 | 5.1.4.173 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Beta-prop_WDR75_2nd | 0.65 | 57.0 | 4.27e-01 | 94.1% | 52.3% |
| 3707549 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.62 | 56.0 | 4.10e-01 | 98.7% | 44.1% |
| 3714021 | 5.1.3.28 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 | 0.59 | 54.0 | 3.94e-01 | 100.0% | 40.7% |
| 3538579 | 5.1.5.135 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Sema | 0.58 | 54.0 | 3.71e-01 | 100.0% | 59.0% |
| 3675847 | 5.1.5.1 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › WD40 | 0.58 | 41.0 | 3.29e-01 | 100.0% | 36.4% |
| 4984555 | 5.1.2.0 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed | 0.58 | 50.0 | 4.03e-01 | 100.0% | 47.5% |
| 1397703 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.57 | 52.0 | 4.15e-01 | 100.0% | 62.1% |
| 3614253 | 5.1.4.16 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CPSF_A | 0.57 | 48.0 | 3.64e-01 | 91.4% | 54.4% |
| 3468093 | 243.3.1.19 ↗ | a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin › DUF3615 | 0.56 | 33.0 | 4.06e-01 | 70.4% | 91.8% |
| 4016261 | 5.1.2.8 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 | 0.55 | 48.0 | 3.75e-01 | 94.1% | 75.5% |
| 153416 | 5.1.2.13 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › DUF5005 | 0.54 | 49.0 | 3.63e-01 | 100.0% | 47.8% |
| 3256626 | 5.1.4.369 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › EMC1_C, Beta-prop_EMC1_N | 0.53 | 49.0 | 3.03e-01 | 100.0% | 59.7% |
| 3827703 | 5.1.4.550 ↗ | beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_FKB95 | 0.53 | 45.0 | 3.63e-01 | 94.1% | 58.4% |
| 3512269 | 79.1.1.16 ↗ | beta duplicates or obligate multimers › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › Phage tail fiber protein trimerization domain › DUF1983 | 0.51 | 27.0 | 3.34e-01 | 75.7% | 83.3% |
| 3226630 | 11.10.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › TRAF domain-like › TRAF domain-like | 0.51 | 36.0 | 3.58e-01 | 72.4% | 78.1% |
D3
medium
residues 362-498