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hemagglutinin_protein

Euk-Vir

Feline_morbillivirus

hemagglutinin_protein__YP_009512963__Feline_morbillivirus__1170234

Identity

Accession:
YP_009512963 ↗
Protein ID:
hemagglutinin_protein
Kingdom:
euk

Quality

60.6 mean pLDDT

Taxonomy

Orthornavirae› Negarnaviricota› Monjiviricetes› Mononegavirales› Paramyxoviridae› Morbillivirus› Feline_morbillivirus

TaxID: 1170234

Cluster

View cluster (5 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 193-210_500-595
PDB
D2 medium residues 211-351
PDB
Domain cluster: rep: hemagglutinin-neuraminidase__YP_009094497__Tuhoko_virus_1__798072__D178-291
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF00423.27 best HN 45.7 4.80e-12 97.2% 24.7%
CATH (20)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
4uf7B00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.84 79.0 5.51e-01 100.0% 34.5%
2rkcA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.82 74.0 5.22e-01 100.0% 33.6%
2vsmA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.80 76.0 5.28e-01 100.0% 35.1%
1v3eA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.78 73.0 5.05e-01 100.0% 34.1%
1e8uA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.78 73.0 4.99e-01 100.0% 32.1%
1z4vA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.76 71.0 4.89e-01 100.0% 31.8%
1ms9A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.70 64.0 4.68e-01 100.0% 47.4%
7mhuA01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.69 63.0 4.61e-01 100.0% 41.7%
6nu7A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.65 57.0 4.29e-01 100.0% 39.6%
2g8sB00 2.120.10.30 Mainly Beta › 6 Propeller › Neuraminidase › TolB, C-terminal domain 0.61 54.0 4.09e-01 97.9% 78.4%
2xcmC00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.61 31.0 3.72e-01 73.0% 72.8%
3pijA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 53.0 3.96e-01 100.0% 43.0%
4d47A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.59 53.0 3.87e-01 100.0% 40.1%
2w5nA00 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.58 52.0 3.84e-01 97.9% 67.9%
3wasA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.58 52.0 3.83e-01 100.0% 43.2%
2i0rA01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 53.0 3.94e-01 99.3% 53.5%
1shyB01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.58 52.0 3.65e-01 99.3% 43.1%
5hp6A01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.54 49.0 3.74e-01 99.3% 62.7%
2p0wA02 3.40.630.30 Alpha Beta › 3-Layer(aba) Sandwich › Aminopeptidase › Gcn5-related N-acetyltransferase (GNAT) 0.52 40.0 4.16e-01 80.1% 98.5%
4k02A00 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.52 38.0 3.95e-01 76.6% 94.5%
ECOD (31)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2527935 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.85 80.0 5.51e-01 100.0% 32.8%
1519176 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.84 79.0 5.49e-01 100.0% 34.1%
3062082 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.83 79.0 5.41e-01 100.0% 33.7%
4889672 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.82 77.0 5.29e-01 100.0% 33.8%
1196318 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.81 75.0 5.21e-01 100.0% 32.5%
3062081 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.80 76.0 5.23e-01 100.0% 34.0%
2833528 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.80 75.0 5.04e-01 100.0% 29.5%
2541822 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.79 74.0 6.62e-01 100.0% 74.5%
1112626 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.78 73.0 5.05e-01 100.0% 33.6%
2093820 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.78 74.0 5.07e-01 100.0% 32.5%
4881991 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.77 72.0 4.97e-01 100.0% 32.2%
152420 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.77 72.0 4.82e-01 100.0% 29.4%
1563144 5.1.3.5 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › HN 0.76 72.0 4.79e-01 100.0% 29.5%
4030216 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.71 57.0 4.35e-01 99.3% 37.4%
3275455 4210.1.1.0 ↗ a+b two layers › WGR domain › WGR domain › WGR domain 0.68 41.0 4.46e-01 100.0% 70.8%
4569359 4099.1.1.0 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like 0.67 31.0 3.99e-01 71.6% 72.9%
3648057 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.67 56.0 4.16e-01 98.6% 35.7%
3584129 5.1.4.37 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Nup160 0.64 59.0 3.91e-01 100.0% 42.7%
3603591 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.64 58.0 4.28e-01 99.3% 67.8%
4015241 5.1.4.51 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › BNR_4 0.63 58.0 4.06e-01 100.0% 39.5%
3707549 5.1.3.28 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › BNR_3 0.62 57.0 4.08e-01 100.0% 42.2%
4929596 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 57.0 3.97e-01 100.0% 37.6%
3709769 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.61 54.0 4.08e-01 96.5% 47.0%
3302402 319.1.1.3 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › CS 0.60 30.0 3.55e-01 73.8% 67.0%
3467382 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 54.0 4.02e-01 97.2% 87.8%
3894035 5.1.4.12 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Sema 0.60 53.0 3.67e-01 97.2% 67.6%
4059480 881.1.1.37 ↗ a+b three layers › Mog1p/PsbP-like › Mog1p/PsbP-like › Mog1p/PsbP-like › PF27270 0.59 35.0 3.30e-01 78.0% 46.9%
4599589 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.58 53.0 3.95e-01 100.0% 61.1%
3701010 5.1.3.25 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Mcl1_mid 0.58 54.0 4.10e-01 99.3% 55.5%
4883419 5.1.2.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 5-bladed › Glyco_hydro_43 0.56 50.0 3.87e-01 100.0% 49.2%
3705916 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.51 44.0 3.25e-01 96.5% 52.4%
D3 medium residues 352-474
PDB