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hexon
Euk-VirSimian_adenovirus_8
hexon__YP_009174949__Simian_adenovirus_8__413258
Identity
- Accession:
- YP_009174949 ↗
- Protein ID:
- hexon
- Kingdom:
- euk
Quality
64.5
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Simian_adenovirus_8
TaxID: 413258
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
medium
residues 57-95_533-614
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01065.25 best | Adeno_hexon | 138.4 | 4.40e-40 | 64.5% | 13.1% |
| PF01065.25 | Adeno_hexon | 43.2 | 3.00e-11 | 33.1% | 6.8% |
CATH (23)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1fr3A00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 27.0 | 3.56e-01 | 71.9% | 70.1% |
| 1gutA00 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.64 | 27.0 | 3.60e-01 | 71.1% | 71.6% |
| 3rn5A02 | 2.40.50.140 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins | 0.63 | 26.0 | 3.04e-01 | 71.9% | 51.1% |
| 4iykA02 | 2.60.40.2060 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.59 | 44.0 | 4.48e-01 | 77.7% | 86.4% |
| 2yn5A01 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.59 | 35.0 | 4.15e-01 | 78.5% | 88.6% |
| 3rbsA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.58 | 37.0 | 4.23e-01 | 76.9% | 87.5% |
| 1b9mA03 | 2.40.50.100 | Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain | 0.56 | 24.0 | 2.98e-01 | 74.4% | 63.4% |
| 1ex0A03 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 42.0 | 4.38e-01 | 81.0% | 86.8% |
| 3qwnA02 | 2.60.40.2370 | Mainly Beta › Sandwich › Immunoglobulin-like › NigD-like, C-terminal beta sandwich domain | 0.55 | 40.0 | 3.88e-01 | 75.2% | 73.1% |
| 7jz1H02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.55 | 35.0 | 3.94e-01 | 73.6% | 85.7% |
| 1yi9A02 | 2.60.120.230 | Mainly Beta › Sandwich › Jelly Rolls › | 0.55 | 42.0 | 4.06e-01 | 81.0% | 81.0% |
| 8owfA01 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 41.0 | 4.25e-01 | 78.5% | 93.7% |
| 1e5bA00 | 2.60.40.290 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.54 | 38.0 | 4.31e-01 | 79.3% | 100.0% |
| 4j3vA02 | 2.60.40.10 | Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins | 0.54 | 32.0 | 3.44e-01 | 74.4% | 67.6% |
| 7a4aA01 | 2.60.40.3770 | Mainly Beta › Sandwich › Immunoglobulin-like › | 0.53 | 33.0 | 3.74e-01 | 76.0% | 88.0% |
| 5evhA00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.53 | 29.0 | 2.95e-01 | 92.6% | 52.9% |
| 1gyvA00 | 2.60.40.1230 | Mainly Beta › Sandwich › Immunoglobulin-like › Gamma-adaptin ear (GAE) domain | 0.53 | 39.0 | 3.92e-01 | 83.5% | 77.5% |
| 4bfoA00 | 2.60.40.2440 | Mainly Beta › Sandwich › Immunoglobulin-like › Carbohydrate binding type-21 domain | 0.52 | 36.0 | 3.80e-01 | 75.2% | 79.2% |
| 3a35A02 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.52 | 34.0 | 3.86e-01 | 76.0% | 88.0% |
| 3a35A01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 33.0 | 3.73e-01 | 75.2% | 85.9% |
| 1i8dA01 | 2.40.30.20 | Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › | 0.51 | 33.0 | 3.83e-01 | 75.2% | 91.0% |
| 3ehcB00 | 3.10.450.50 | Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › | 0.51 | 31.0 | 3.12e-01 | 90.9% | 57.8% |
| 2jj6A00 | 2.60.120.200 | Mainly Beta › Sandwich › Jelly Rolls › | 0.50 | 37.0 | 3.66e-01 | 77.7% | 96.3% |
ECOD (40)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4889924 | 10.2.1.90 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon, Adeno_hexon_C | 0.87 | 82.0 | 5.02e-01 | 100.0% | 86.3% |
| 4996561 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.65 | 40.0 | 4.69e-01 | 74.4% | 88.2% |
| 3931855 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.64 | 53.0 | 4.32e-01 | 88.4% | 79.5% |
| 4526608 | 385.1.1.2 ↗ | few secondary structure elements › Cystine-knot cytokines › Cystine-knot cytokines › Cystine-knot cytokines › TGF_beta | 0.63 | 51.0 | 3.75e-01 | 85.1% | 62.7% |
| 5037355 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.62 | 41.0 | 4.53e-01 | 82.6% | 85.3% |
| 4977976 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.61 | 40.0 | 4.12e-01 | 75.2% | 69.6% |
| 3222661 | 10.2.1.0 ↗ | beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) | 0.61 | 50.0 | 4.23e-01 | 86.8% | 91.6% |
| 5029398 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.59 | 42.0 | 4.39e-01 | 83.5% | 80.7% |
| 2321850 | 11.1.1.245 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Big_6 | 0.59 | 35.0 | 4.12e-01 | 78.5% | 86.4% |
| 3882044 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 35.0 | 3.95e-01 | 78.5% | 78.9% |
| 3186200 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.58 | 37.0 | 4.34e-01 | 78.5% | 91.8% |
| 3887701 | 11.1.1.179 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 | 0.58 | 36.0 | 3.67e-01 | 76.0% | 62.5% |
| 3218594 | 11.1.1.2 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › fn3 | 0.57 | 35.0 | 4.06e-01 | 76.0% | 85.9% |
| 5016736 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 40.0 | 4.29e-01 | 85.1% | 85.7% |
| 3920659 | 11.1.1.178 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_2 | 0.56 | 37.0 | 4.04e-01 | 82.6% | 82.0% |
| 3396431 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.56 | 42.0 | 4.43e-01 | 85.1% | 88.2% |
| 3247863 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 34.0 | 3.73e-01 | 78.5% | 75.8% |
| 3730493 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 46.0 | 4.59e-01 | 92.6% | 88.0% |
| 3897566 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.55 | 33.0 | 3.88e-01 | 76.9% | 85.9% |
| 3773133 | 11.1.1.636 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IL17_R_N | 0.55 | 35.0 | 3.75e-01 | 83.5% | 76.0% |
| 3925857 | 11.1.1.673 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N | 0.54 | 37.0 | 3.92e-01 | 81.8% | 80.0% |
| 3335769 | 11.1.5.7 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › Adap_comp_sub | 0.54 | 43.0 | 4.55e-01 | 83.5% | 99.0% |
| 3618913 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.54 | 37.0 | 4.01e-01 | 84.3% | 86.0% |
| 3879295 | 11.1.1.97 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › I-set | 0.53 | 37.0 | 4.00e-01 | 83.5% | 83.8% |
| 1146574 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.53 | 36.0 | 3.79e-01 | 75.2% | 76.9% |
| 5037487 | 12.1.1.0 ↗ | beta sandwiches › Glycosyl hydrolase domain-like › Glycosyl hydrolase domain › Glycosyl hydrolase domain | 0.53 | 30.0 | 3.75e-01 | 76.0% | 100.0% |
| 3247388 | 11.1.1.673 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N | 0.53 | 37.0 | 4.02e-01 | 82.6% | 86.0% |
| 3501278 | 11.1.1.673 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N | 0.52 | 35.0 | 3.80e-01 | 74.4% | 80.0% |
| 5025184 | 10.1.2.0 ↗ | beta sandwiches › jelly-roll › Concanavalin A-like › GOLD domain-like (DEPRECATED) | 0.52 | 40.0 | 4.12e-01 | 81.0% | 97.4% |
| 3937438 | 11.1.5.84 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Common fold of diphtheria toxin/transcription factors/cytochrome f › ERMP1_C | 0.52 | 42.0 | 4.05e-01 | 87.6% | 87.9% |
| 3882371 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.52 | 33.0 | 3.63e-01 | 81.8% | 84.4% |
| 5067451 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.51 | 32.0 | 3.62e-01 | 77.7% | 84.4% |
| 3722331 | 10.32.1.0 ↗ | beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like | 0.51 | 40.0 | 3.60e-01 | 84.3% | 76.6% |
| 4195480 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.51 | 34.0 | 3.84e-01 | 75.2% | 90.0% |
| 3384073 | 1.1.7.0 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C | 0.51 | 37.0 | 3.74e-01 | 75.2% | 96.7% |
| 4055490 | 1.1.7.5 ↗ | beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C › Lum_binding | 0.51 | 33.0 | 3.80e-01 | 75.2% | 90.0% |
| 2718212 | 2.4.1.1 ↗ | beta barrels › OB-fold › MOP-like › MOP-like › TOBE | 0.50 | 27.0 | 3.41e-01 | 92.6% | 86.3% |
| 3536205 | 11.1.1.229 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › IRK_C | 0.50 | 40.0 | 3.44e-01 | 86.0% | 61.5% |
| 3899325 | 11.1.1.0 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like | 0.50 | 33.0 | 3.27e-01 | 81.8% | 61.5% |
| 3930373 | 11.1.1.673 ↗ | beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › CUT_N | 0.50 | 34.0 | 3.60e-01 | 79.3% | 79.0% |
D2
medium
residues 96-121_434-532
Domain cluster:
rep: hexon__YP_009246389__Bat_mastadenovirus_WIV10__1788432__D355-370_429-528
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01065.25 best | Adeno_hexon | 142.3 | 2.80e-41 | 80.8% | 17.1% |
| PF01065.25 | Adeno_hexon | 42.6 | 4.50e-11 | 22.4% | 4.6% |
D3
medium
residues 122-271_386-433_798-844
Domain cluster:
rep: hexon__YP_009362848__Bat_mastadenovirus_WIV17__1986505__D115-307_370-416_787-818
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01065.25 best | Adeno_hexon | 26.6 | 3.10e-06 | 71.0% | 24.2% |
D4
medium
residues 272-319
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01065.25 best | Adeno_hexon | 32.9 | 4.00e-08 | 91.7% | 3.9% |
D5
medium
residues 615-720_867-919