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hexon

Euk-Vir

Bat_mastadenovirus_WIV17

hexon__YP_009362848__Bat_mastadenovirus_WIV17__1986505

Identity

Accession:
YP_009362848 ↗
Protein ID:
hexon
Kingdom:
euk

Quality

64.9 mean pLDDT

Taxonomy

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Mastadenovirus› Bat_mastadenovirus_WIV17

TaxID: 1986505

Cluster

View cluster (53 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 421-489
PDB
Domain cluster: rep: hexon,_partial__YP_010087287__Psittacine_adenovirus_1__318592__D314-372
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01065.25 best Adeno_hexon 84.5 9.50e-24 100.0% 11.8%
CATH (2)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1p2zA02 3.90.39.10 Alpha Beta › Alpha-Beta Complex › Hexon Major Viral Coat Protein; domain 2 › Hexon Major Viral Coat Protein, domain 2 0.86 79.0 6.01e-01 100.0% 45.4%
1s5jA03 3.90.1600.10 Alpha Beta › Alpha-Beta Complex › Palm domain of DNA polymerase › B family DNA polymerase, palm domain 0.53 34.0 2.62e-01 84.1% 29.3%
ECOD (7)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4889924 10.2.1.90 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon, Adeno_hexon_C 0.86 79.0 4.51e-01 100.0% 11.0%
2080941 10.2.1.17 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon 0.84 77.0 4.38e-01 100.0% 11.0%
410054 10.2.1.17 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon 0.75 66.0 3.88e-01 100.0% 12.0%
4930554 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.54 33.0 3.52e-01 82.6% 70.0%
3879962 376.1.2.1 ↗ few secondary structure elements › RING/U-box-like › RING/U-box-like › Cysteine-rich domain › C1_1 0.53 41.0 3.53e-01 88.4% 83.3%
3186204 101.1.2.0 ↗ alpha arrays › HTH › HTH › winged helix domain 0.53 40.0 3.14e-01 84.1% 38.1%
3433965 101.1.2.386 ↗ alpha arrays › HTH › HTH › winged helix domain › WH_DRP 0.50 37.0 3.02e-01 79.7% 70.0%
D2 high residues 598-687_853-899
PDB
D3 medium residues 58-114_524-595
PDB
Domain cluster: rep: hexon__YP_009174949__Simian_adenovirus_8__413258__D57-95_533-614
Pfam (2)
AccessionNameScoreE-valueQ covHMM cov
PF01065.25 best Adeno_hexon 120.1 1.50e-34 53.5% 11.8%
PF01065.25 Adeno_hexon 77.2 1.50e-21 44.2% 9.7%
D4 medium residues 115-307_370-416_787-818
PDB
Domain cluster: representative
Pfam (1)
AccessionNameScoreE-valueQ covHMM cov
PF01065.25 best Adeno_hexon 95.2 5.30e-27 72.4% 31.6%
ECOD (5)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2719199 10.2.1.17 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon 0.86 61.0 5.37e-01 71.0% 56.9%
2080941 10.2.1.17 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon 0.67 65.0 4.78e-01 100.0% 71.0%
410054 10.2.1.17 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon 0.61 58.0 4.45e-01 100.0% 70.6%
163336 10.2.1.17 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon 0.57 55.0 4.10e-01 100.0% 67.8%
4889924 10.2.1.90 ↗ beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Adeno_hexon, Adeno_hexon_C 0.57 55.0 4.03e-01 100.0% 64.3%