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hexon
Euk-VirBottlenose_dolphin_adenovirus_1
hexon__YP_009704131__Bottlenose_dolphin_adenovirus_1__1714377
Identity
- Accession:
- YP_009704131 ↗
- Protein ID:
- hexon
- Kingdom:
- euk
Quality
62.1
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Mastadenovirus›
Bottlenose_dolphin_adenovirus_1
TaxID: 1714377
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 630-707_890-932
D2
medium
residues 137-259_415-434
Domain cluster:
representative
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 2dk1A00 | 2.20.70.10 | Mainly Beta › Single Sheet › Ubiquitin Ligase Nedd4; Chain: W; › | 0.54 | 20.0 | 2.93e-01 | 86.0% | 82.0% |
ECOD (5)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 5032251 | 375.1.1.0 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related | 0.59 | 18.0 | 3.05e-01 | 76.9% | 80.0% |
| 5070745 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.57 | 19.0 | 3.20e-01 | 86.7% | 86.7% |
| 4989647 | 375.1.1.19 ↗ | few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › RNA_POL_M_15KD | 0.53 | 20.0 | 2.84e-01 | 80.4% | 74.5% |
| 5044373 | 4.1.1.0 ↗ | beta barrels › SH3 › SH3 › SH3 | 0.53 | 23.0 | 3.44e-01 | 92.3% | 96.7% |
| 4025781 | 2.1.1.0 ↗ | beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein | 0.52 | 21.0 | 2.99e-01 | 86.0% | 80.0% |
D3
medium
residues 260-276_388-414_809-850
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF03678.23 best | Adeno_hexon_C | 43.2 | 5.50e-11 | 87.2% | 22.0% |
CATH (1)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1p2zA02 | 3.90.39.10 | Alpha Beta › Alpha-Beta Complex › Hexon Major Viral Coat Protein; domain 2 › Hexon Major Viral Coat Protein, domain 2 | 0.56 | 43.0 | 3.48e-01 | 80.2% | 91.4% |
D4
medium
residues 277-320_542-587
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF01065.25 best | Adeno_hexon | 88.3 | 6.40e-25 | 55.6% | 8.2% |
| PF01065.25 | Adeno_hexon | 34.7 | 1.10e-08 | 43.3% | 4.6% |