hexon_assembly_protein_100K

Euk-Vir

Pigeon_adenovirus_2

hexon_assembly_protein_100K__YP_009310440__Pigeon_adenovirus_2__1907767

Identity

62.3 mean pLDDT

Bamfordvirae› Preplasmiviricota› Pharingeaviricetes› Rowavirales› Adenoviridae› Aviadenovirus› Pigeon_adenovirus_2

TaxID: 1907767

View cluster (53 members)

Download PDB Download Scores JSON

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 726-824

PDB

Domain cluster: rep: 100K__YP_009174953__Simian_adenovirus_8__413258__D559-661

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	133.4	1.10e-38	100.0%	16.9%

D2 medium residues 3-83

PDB

D3 medium residues 269-313

PDB

D4 medium residues 321-426_667-689

PDB

Domain cluster: rep: 100K__YP_009174953__Simian_adenovirus_8__413258__D149-260

Pfam (1)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	145.2	3.10e-42	86.1%	18.4%

D5 medium residues 427-443_457-562_608-631_690-716

PDB

Domain cluster: rep: hexon_assembly_protein_100K__YP_009505666__Fowl_aviadenovirus_6__172862__D492-506_534-572_636-706

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	129.5	1.80e-37	80.5%	25.5%
PF02438.22	Adeno_100	27.1	1.80e-06	21.3%	4.2%

D6 medium residues 563-607_632-666

PDB

Domain cluster: representative

Pfam (2)

Accession	Name	Score	E-value	Q cov	HMM cov
PF02438.22 best	Adeno_100	62.6	3.20e-17	57.5%	7.6%
PF02438.22	Adeno_100	40.4	1.60e-10	48.8%	6.4%

CATH (7)

Domain ID	Class ID	Classification	TM-score	Bits	E-value	Q cov	T cov
1wp7A00	1.10.287.770	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like	0.73	42.0	4.65e-01	70.0%	71.9%
3kbbA02	1.10.150.240	Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › Putative phosphatase; domain 2	0.59	29.0	3.12e-01	96.2%	51.4%
5dn6J00	1.20.20.10	Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C	0.58	41.0	4.23e-01	75.0%	79.7%
2hh7A00	1.20.58.1000	Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Metal-sensitive repressor, helix protomer	0.58	40.0	3.98e-01	73.8%	68.2%
6tkvA01	1.10.287.1060	Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like	0.58	41.0	4.43e-01	90.0%	85.3%
3kb9A00	1.10.600.10	Mainly Alpha › Orthogonal Bundle › Farnesyl Diphosphate Synthase › Farnesyl Diphosphate Synthase	0.58	41.0	2.79e-01	77.5%	22.1%
4jgsD00	1.10.287.210	Mainly Alpha › Orthogonal Bundle › Helix Hairpins ›	0.50	44.0	4.33e-01	93.8%	90.6%

ECOD (5)

UID	F-ID	Classification	TM-score	Bits	E-value	Q cov	T cov
3691750	376.1.1.8 ↗	few secondary structure elements › RING/U-box-like › RING/U-box-like › RING/U-box › U-box	0.69	39.0	3.12e-01	72.5%	30.2%
3937576	109.4.1.0 ↗	alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat	0.60	43.0	2.52e-01	78.8%	8.1%
3323356	632.7.1.2 ↗	alpha bundles › immunoglobulin/albumin-binding domain-like › Heat shock protein 70kD (HSP70), C-terminal subdomain › Heat shock protein 70kD (HSP70), C-terminal subdomain › RWP-RK	0.55	39.0	3.45e-01	72.5%	71.3%
3435709	605.1.1.0 ↗	alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase	0.55	44.0	4.42e-01	93.8%	83.7%
3292746	192.29.1.25 ↗	alpha bundles › Long alpha-hairpin › bMERB domain (bivalent Mical/EHBP Rab binding) › bMERB domain (bivalent Mical/EHBP Rab binding) › CA109-like	0.54	46.0	3.41e-01	92.5%	71.0%