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hexon_assembly_protein_100K
Euk-VirFowl_aviadenovirus_6
hexon_assembly_protein_100K__YP_009505666__Fowl_aviadenovirus_6__172862
Identity
- Accession:
- YP_009505666 ↗
- Protein ID:
- hexon_assembly_protein_100K
- Kingdom:
- euk
Quality
63.4
mean pLDDT
Taxonomy
Bamfordvirae›
Preplasmiviricota›
Pharingeaviricetes›
Rowavirales›
Adenoviridae›
Aviadenovirus›
Fowl_aviadenovirus_6
TaxID: 172862
Cluster
View cluster (53 members)3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 1-87
Domain cluster:
rep: hexon_assembly_protein_100K__YP_006383567__Goose_adenovirus_4__1193422__D5-84
D2
high
residues 804-886
Domain cluster:
rep: 100K__YP_009174953__Simian_adenovirus_8__413258__D559-661
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 100.3 | 1.20e-28 | 100.0% | 14.0% |
D3
medium
residues 385-491
Domain cluster:
rep: hexon_assembly_protein_100K__NP_040927__Human_mastadenovirus_A__129875__D157-206_225-250
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 153.6 | 8.40e-45 | 100.0% | 18.2% |
D4
medium
residues 492-506_534-572_636-706
Domain cluster:
representative
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 85.1 | 4.90e-24 | 58.4% | 12.0% |
CATH (10)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4ys0A02 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.63 | 49.0 | 4.45e-01 | 81.6% | 100.0% |
| 2fsfB04 | 1.10.3060.10 | Mainly Alpha › Orthogonal Bundle › Helical scaffold and wing domains of SecA › Helical scaffold and wing domains of SecA | 0.60 | 46.0 | 3.92e-01 | 81.6% | 87.7% |
| 4cxfA01 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.58 | 37.0 | 4.28e-01 | 96.0% | 92.0% |
| 2y1eA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.58 | 36.0 | 4.09e-01 | 100.0% | 87.4% |
| 3qwlA03 | 1.10.472.80 | Mainly Alpha › Orthogonal Bundle › Cyclin A; domain 1 › Ypt/Rab-GAP domain of gyp1p, domain 3 | 0.56 | 40.0 | 3.98e-01 | 95.2% | 69.1% |
| 1gvnA00 | 1.10.8.130 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.56 | 24.0 | 2.89e-01 | 70.4% | 59.8% |
| 3v5uA01 | 6.10.280.80 | Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › NCX, peripheral helical region | 0.55 | 26.0 | 3.27e-01 | 70.4% | 73.7% |
| 2m6uA00 | 1.20.81.20 | Mainly Alpha › Up-down Bundle › Receptor-associated Protein › | 0.55 | 36.0 | 4.22e-01 | 80.8% | 100.0% |
| 2c41C01 | 1.20.1260.10 | Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle | 0.50 | 40.0 | 3.82e-01 | 100.0% | 72.5% |
| 5jazA03 | 1.10.1740.10 | Mainly Alpha › Orthogonal Bundle › Rna Polymerase Sigma Factor; Chain: A › RNA polymerase sigma factor, region 2, helix turn helix motif | 0.50 | 35.0 | 3.91e-01 | 96.0% | 96.7% |
ECOD (3)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 4968425 | 4009.1.1.1 ↗ | alpha bundles › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › alpha-helical domain in AF1104-like proteins › ARMT1-like_dom | 0.65 | 36.0 | 4.66e-01 | 79.2% | 97.1% |
| 4028408 | 7111.1.1.1 ↗ | alpha bundles › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiquinol-cytochrome C chaperone, C-terminal domain › Ubiq_cyt_C_chap | 0.54 | 39.0 | 3.26e-01 | 75.2% | 83.2% |
| 3878177 | 524.1.1.1 ↗ | alpha arrays › Ypt/Rab-GAP domain of gyp1p-like › Ypt/Rab-GAP domain of gyp1p › Ypt/Rab-GAP domain of gyp1p › RabGAP-TBC | 0.51 | 35.0 | 3.24e-01 | 74.4% | 52.7% |
D5
medium
residues 573-635_707-777
Domain cluster:
rep: 100K__YP_009325348__Bat_mastadenovirus_G__2015376__D293-384_422-438_476-510
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF02438.22 best | Adeno_100 | 110.5 | 1.00e-31 | 53.7% | 11.8% |
| PF02438.22 | Adeno_100 | 86.2 | 2.30e-24 | 47.8% | 10.6% |