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high_mobility_group_protein-like_protein
Euk-VirAnopheles_minimus_iridovirus
high_mobility_group_protein-like_protein__YP_009021211__Anopheles_minimus_iridovirus__1465751
Identity
- Accession:
- YP_009021211 ↗
- Protein ID:
- high_mobility_group_protein-like_protein
- Kingdom:
- euk
Quality
81.9
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Iridoviridae›
Chloriridovirus›
Chloriridovirus_anopheles1
TaxID: 1465751
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 72-123
Domain cluster:
rep: ubiquitin__YP_007676278__Micromonas_pusilla_virus_12T__755272__D91-133
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00505.26 best | HMG_box | 49.2 | 8.10e-13 | 100.0% | 72.5% |
| PF09011.17 | HMG_box_2 | 35.9 | 1.30e-08 | 100.0% | 62.5% |
D2
medium
residues 1-65
Domain cluster:
representative
Pfam (2)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00505.26 best | HMG_box | 55.6 | 8.40e-15 | 95.4% | 82.6% |
| PF09011.17 | HMG_box_2 | 42.6 | 1.10e-10 | 95.4% | 73.6% |
CATH (14)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1wgfA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.90 | 66.0 | 7.22e-01 | 76.9% | 94.3% |
| 6jrpA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.86 | 69.0 | 7.18e-01 | 86.2% | 95.1% |
| 1gt0D00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.85 | 72.0 | 6.73e-01 | 93.8% | 75.9% |
| 7cyuA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.85 | 67.0 | 7.14e-01 | 84.6% | 96.5% |
| 2e6oA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.84 | 74.0 | 6.67e-01 | 98.5% | 71.3% |
| 2co9A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.80 | 71.0 | 6.06e-01 | 96.9% | 62.7% |
| 2lefA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.79 | 71.0 | 6.42e-01 | 98.5% | 75.6% |
| 3tmmA01 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.76 | 69.0 | 5.79e-01 | 100.0% | 66.1% |
| 1v63A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.73 | 66.0 | 5.69e-01 | 100.0% | 72.3% |
| 3fghA00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.72 | 58.0 | 5.80e-01 | 95.4% | 85.1% |
| 1v64A00 | 1.10.30.10 | Mainly Alpha › Orthogonal Bundle › DNA Binding (I), subunit A › High mobility group box domain | 0.71 | 63.0 | 5.33e-01 | 100.0% | 67.6% |
| 3bvoA02 | 1.20.1280.20 | Mainly Alpha › Up-down Bundle › Monooxygenase › HscB, C-terminal domain | 0.65 | 45.0 | 4.14e-01 | 100.0% | 54.7% |
| 4kp3C00 | 1.20.58.1770 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.60 | 38.0 | 3.53e-01 | 95.4% | 49.4% |
| 2np5D00 | 1.10.357.10 | Mainly Alpha › Orthogonal Bundle › Tetracycline Repressor; domain 2 › Tetracycline Repressor, domain 2 | 0.56 | 43.0 | 3.38e-01 | 89.2% | 96.8% |
ECOD (49)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3863510 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.92 | 70.0 | 6.67e-01 | 80.0% | 69.3% |
| 3546996 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.91 | 73.0 | 7.08e-01 | 84.6% | 78.6% |
| 3503437 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.89 | 74.0 | 6.66e-01 | 90.8% | 67.1% |
| 3893243 | 190.1.1.9 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_WDHD1 | 0.89 | 64.0 | 6.89e-01 | 75.4% | 89.1% |
| 4591229 | 190.1.1.8 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › NUT | 0.88 | 79.0 | 6.91e-01 | 100.0% | 67.4% |
| 3705890 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.86 | 80.0 | 6.89e-01 | 100.0% | 69.5% |
| 3802347 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.85 | 73.0 | 4.49e-01 | 90.8% | 17.9% |
| 3593421 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.85 | 79.0 | 6.96e-01 | 100.0% | 72.2% |
| 3506838 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.85 | 76.0 | 6.60e-01 | 96.9% | 68.4% |
| 3916833 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.84 | 74.0 | 6.86e-01 | 93.8% | 80.0% |
| 4102250 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.84 | 74.0 | 6.83e-01 | 93.8% | 76.2% |
| 3176953 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.84 | 69.0 | 6.77e-01 | 89.2% | 81.4% |
| 3484315 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.84 | 72.0 | 6.22e-01 | 90.8% | 63.2% |
| 2665668 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.83 | 67.0 | 6.92e-01 | 89.2% | 90.3% |
| 3498339 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.83 | 71.0 | 6.43e-01 | 90.8% | 70.6% |
| 3268169 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.83 | 75.0 | 6.39e-01 | 96.9% | 64.0% |
| 3269300 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.83 | 77.0 | 6.94e-01 | 100.0% | 76.5% |
| 3470186 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.83 | 72.0 | 6.42e-01 | 93.8% | 67.8% |
| 3486506 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.82 | 72.0 | 6.85e-01 | 93.8% | 81.3% |
| 3323413 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.82 | 73.0 | 6.61e-01 | 95.4% | 75.3% |
| 3171915 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.82 | 72.0 | 6.55e-01 | 95.4% | 72.9% |
| 3419147 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.82 | 73.0 | 6.45e-01 | 95.4% | 71.1% |
| 3538509 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.81 | 72.0 | 6.05e-01 | 95.4% | 61.0% |
| 3506153 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.81 | 70.0 | 6.45e-01 | 95.4% | 73.5% |
| 3486557 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.81 | 73.0 | 6.72e-01 | 96.9% | 78.8% |
| 3238821 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.80 | 67.0 | 6.11e-01 | 90.8% | 70.6% |
| 4344838 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.80 | 74.0 | 6.83e-01 | 100.0% | 83.7% |
| 3491886 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.80 | 69.0 | 6.60e-01 | 95.4% | 81.3% |
| 3313375 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.79 | 67.0 | 5.44e-01 | 90.8% | 52.2% |
| 2010400 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.79 | 64.0 | 6.21e-01 | 89.2% | 79.2% |
| 3864894 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.79 | 71.0 | 6.41e-01 | 96.9% | 75.3% |
| 3768093 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.79 | 73.0 | 6.11e-01 | 100.0% | 66.7% |
| 4673895 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.78 | 72.0 | 6.18e-01 | 100.0% | 67.0% |
| 3854605 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.78 | 73.0 | 5.98e-01 | 100.0% | 60.0% |
| 3885705 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.78 | 71.0 | 6.42e-01 | 100.0% | 75.3% |
| 3471257 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.78 | 65.0 | 5.42e-01 | 90.8% | 55.5% |
| 3240782 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.77 | 67.0 | 5.04e-01 | 95.4% | 40.7% |
| 4234509 | 190.1.1.5 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › Protamine_like | 0.77 | 62.0 | 5.88e-01 | 90.8% | 74.7% |
| 3771624 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.77 | 68.0 | 5.79e-01 | 95.4% | 66.0% |
| 3323406 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.77 | 66.0 | 4.58e-01 | 95.4% | 29.5% |
| 4344839 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.76 | 70.0 | 6.08e-01 | 100.0% | 71.6% |
| 3930859 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.76 | 66.0 | 6.28e-01 | 95.4% | 81.3% |
| 3398172 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.75 | 69.0 | 5.82e-01 | 100.0% | 63.8% |
| 4102066 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.75 | 67.0 | 5.70e-01 | 100.0% | 64.8% |
| 3533358 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.74 | 68.0 | 5.91e-01 | 100.0% | 70.5% |
| 3572021 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.73 | 62.0 | 6.23e-01 | 90.8% | 92.3% |
| 4863395 | 190.1.1.1 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box | 0.72 | 61.0 | 5.92e-01 | 100.0% | 84.9% |
| 2426 | 190.1.1.3 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box › HMG_box_2 | 0.71 | 63.0 | 5.33e-01 | 100.0% | 67.6% |
| 3597181 | 190.1.1.0 ↗ | alpha arrays › HMG-box-like › HMG-box › HMG-box | 0.68 | 56.0 | 5.34e-01 | 96.9% | 78.7% |