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histone_H2B_H2A_fusion_protein
Euk-VirMarseillevirus_marseillevirus
histone_H2B_H2A_fusion_protein__YP_003407138__Marseillevirus_marseillevirus__694581
Identity
- Accession:
- YP_003407138 ↗
- Protein ID:
- histone_H2B_H2A_fusion_protein
- Kingdom:
- euk
Quality
71.7
mean pLDDT
Taxonomy
Bamfordvirae›
Nucleocytoviricota›
Megaviricetes›
Pimascovirales›
Marseilleviridae›
Marseillevirus›
Marseillevirus_marseillevirus
TaxID: 694581
Cluster
Singleton — not in a non-trivial cluster
3D Structure
Domains
high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.
D1
high
residues 13-168
Domain cluster:
rep: histone_H2A_domain-containing_protein__YP_009345564__Noumeavirus__1955558__D51-161
Pfam (1)
| Accession | Name | Score | E-value | Q cov | HMM cov |
|---|---|---|---|---|---|
| PF00125.31 best | Histone | 42.9 | 7.20e-11 | 53.8% | 89.8% |
CATH (21)
| Domain ID | Class ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 1q9cA01 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.93 | 70.0 | 7.25e-01 | 95.5% | 81.6% |
| 4nftC00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.88 | 82.0 | 7.81e-01 | 100.0% | 85.4% |
| 4zpxA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.87 | 33.0 | 4.45e-01 | 95.5% | 64.1% |
| 2l09A01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.85 | 28.0 | 5.03e-01 | 98.7% | 92.3% |
| 1f1eA00 | 1.10.20.10 | Mainly Alpha › Orthogonal Bundle › Histone, subunit A › Histone, subunit A | 0.81 | 64.0 | 6.52e-01 | 100.0% | 84.8% |
| 2dznF00 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.79 | 28.0 | 4.29e-01 | 98.1% | 75.4% |
| 2kruA01 | 1.10.8.550 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Proto-chlorophyllide reductase 57 kD subunit B | 0.78 | 27.0 | 4.53e-01 | 98.1% | 92.3% |
| 1g8pA02 | 1.10.8.80 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › Magnesium chelatase subunit I, C-Terminal domain | 0.77 | 31.0 | 4.45e-01 | 100.0% | 76.9% |
| 1w5sA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.77 | 29.0 | 3.90e-01 | 97.4% | 62.5% |
| 4a3vB01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.76 | 28.0 | 4.12e-01 | 98.1% | 73.6% |
| 5ubvA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 28.0 | 4.07e-01 | 98.1% | 74.6% |
| 3whkA02 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.74 | 27.0 | 3.94e-01 | 98.1% | 70.8% |
| 3c18A02 | 1.20.120.330 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Nucleotidyltransferases domain 2 | 0.65 | 31.0 | 3.56e-01 | 100.0% | 59.3% |
| 2rldA00 | 1.20.1440.60 | Mainly Alpha › Up-down Bundle › de novo design (two linked rop proteins) › 23S rRNA-intervening sequence | 0.63 | 32.0 | 3.73e-01 | 79.5% | 66.7% |
| 2mpkA00 | 1.20.58.80 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Phosphotransferase system, lactose/cellobiose-type IIA subunit | 0.61 | 23.0 | 3.24e-01 | 87.2% | 68.9% |
| 2qupA00 | 1.20.120.490 | Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Hypothetical protein TM1646-like domain | 0.60 | 31.0 | 3.46e-01 | 99.4% | 62.2% |
| 3fblA00 | 1.20.58.800 | Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › | 0.59 | 27.0 | 3.58e-01 | 76.3% | 79.3% |
| 1fnnA01 | 1.10.8.60 | Mainly Alpha › Orthogonal Bundle › Helicase, Ruva Protein; domain 3 › | 0.58 | 33.0 | 3.94e-01 | 91.7% | 83.2% |
| 5g5gA02 | 1.10.150.120 | Mainly Alpha › Orthogonal Bundle › DNA polymerase; domain 1 › [2Fe-2S]-binding domain | 0.54 | 26.0 | 3.29e-01 | 77.6% | 76.7% |
| 1f7uA02 | 1.10.730.10 | Mainly Alpha › Orthogonal Bundle › Isoleucyl-tRNA Synthetase; Domain 1 › Isoleucyl-tRNA Synthetase; Domain 1 | 0.53 | 31.0 | 3.39e-01 | 98.7% | 68.8% |
| 2k77A00 | 1.10.1780.10 | Mainly Alpha › Orthogonal Bundle › Double Clp-N motif › Clp, N-terminal domain | 0.50 | 37.0 | 3.82e-01 | 100.0% | 80.7% |
ECOD (19)
| UID | F-ID | Classification | TM-score | Bits | E-value | Q cov | T cov |
|---|---|---|---|---|---|---|---|
| 3268260 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.94 | 84.0 | 7.73e-01 | 100.0% | 75.3% |
| 3901020 | 148.1.1.3 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone,Histone_H2A_C | 0.93 | 79.0 | 7.42e-01 | 100.0% | 75.0% |
| 3850897 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.92 | 78.0 | 7.35e-01 | 100.0% | 75.0% |
| 4002595 | 148.1.1.47 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone, CENP-T_C | 0.91 | 76.0 | 7.64e-01 | 100.0% | 85.8% |
| 1761407 | 148.1.1.36 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone, PF26281 | 0.90 | 85.0 | 8.01e-01 | 100.0% | 84.2% |
| 3749242 | 148.1.1.32 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PF26281 | 0.85 | 81.0 | 7.23e-01 | 100.0% | 76.2% |
| 3750322 | 148.1.1.32 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PF26281 | 0.85 | 78.0 | 7.42e-01 | 100.0% | 83.3% |
| 3405118 | 148.1.1.32 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PF26281 | 0.85 | 77.0 | 7.11e-01 | 100.0% | 77.4% |
| 3519991 | 148.1.1.3 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone,Histone_H2A_C | 0.83 | 76.0 | 6.80e-01 | 100.0% | 72.2% |
| 4989561 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.83 | 65.0 | 6.66e-01 | 100.0% | 85.2% |
| 3992206 | 148.1.1.32 ↗ | alpha arrays › Histone-like › Histone-related › Histone › PF26281 | 0.80 | 66.0 | 6.63e-01 | 92.3% | 85.8% |
| 3668968 | 148.1.1.3 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone,Histone_H2A_C | 0.79 | 52.0 | 5.45e-01 | 100.0% | 72.4% |
| 4223248 | 621.1.1.3 ↗ | alpha bundles › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Interferon-induced guanylate-binding protein 1 (GBP1), C-terminal domain › Sey1_3HB | 0.74 | 29.0 | 3.51e-01 | 84.0% | 52.7% |
| 4029079 | 148.1.1.0 ↗ | alpha arrays › Histone-like › Histone-related › Histone | 0.68 | 63.0 | 5.57e-01 | 100.0% | 90.5% |
| 3577339 | 148.1.1.4 ↗ | alpha arrays › Histone-like › Histone-related › Histone › CBFD_NFYB_HMF | 0.68 | 44.0 | 5.21e-01 | 92.9% | 92.7% |
| 3696451 | 148.1.1.1 ↗ | alpha arrays › Histone-like › Histone-related › Histone › Histone | 0.66 | 46.0 | 4.82e-01 | 70.5% | 77.2% |
| 3993813 | 148.1.1.9 ↗ | alpha arrays › Histone-like › Histone-related › Histone › TFIID_20kDa | 0.65 | 39.0 | 4.88e-01 | 96.2% | 97.9% |
| 3422206 | 180.1.1.1 ↗ | alpha bundles › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › Acid phosphatase/Vanadium-dependent haloperoxidase › PAP2 | 0.52 | 37.0 | 3.19e-01 | 84.6% | 45.6% |
| 4373226 | 2484.1.1.25 ↗ | mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › RuvC | 0.50 | 45.0 | 4.27e-01 | 96.2% | 100.0% |