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hoar

Euk-Vir

Apocheima_cinerarium_nucleopolyhedrovirus

hoar__YP_006607885__Apocheima_cinerarium_nucleopolyhedrovirus__307461

Identity

Accession:
YP_006607885 ↗
Protein ID:
hoar
Kingdom:
euk

Quality

61.7 mean pLDDT

Taxonomy

Naldaviricetes› Lefavirales› Baculoviridae› Alphabaculovirus› Apocheima_cinerarium_nucleopolyhedrovirus

TaxID: 307461

Cluster

Singleton — not in a non-trivial cluster

3D Structure

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Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 523-564
PDB
D2 medium residues 12-64
PDB
Domain cluster: representative
CATH (65)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1dp4C02 3.40.50.2300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Response regulator 0.77 63.0 4.16e-01 88.7% 37.7%
2w38A01 2.120.10.10 Mainly Beta › 6 Propeller › Neuraminidase › 0.75 53.0 3.21e-01 73.6% 30.5%
1ri6A00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.75 54.0 3.27e-01 77.4% 24.3%
3l4gC04 3.30.930.10 Alpha Beta › 2-Layer Sandwich › BirA Bifunctional Protein; domain 2 › Bira Bifunctional Protein; Domain 2 0.72 62.0 3.92e-01 98.1% 25.9%
3hfqA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.71 52.0 3.12e-01 77.4% 23.5%
2hesX00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.70 51.0 3.13e-01 77.4% 23.4%
4ci8A01 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.69 52.0 3.12e-01 79.2% 21.4%
3qz4A00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.69 50.0 3.08e-01 77.4% 32.4%
2kc8A00 3.30.2310.20 Alpha Beta › 2-Layer Sandwich › YaeB-like fold › RelE-like 0.67 47.0 3.88e-01 73.6% 42.1%
3kh8A02 3.10.129.10 Alpha Beta › Roll › Thiol Ester Dehydrase; Chain A › Hotdog Thioesterase 0.67 52.0 3.93e-01 86.8% 88.0%
3v8uA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.66 47.0 4.08e-01 83.0% 46.7%
4kt3B00 3.10.450.170 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › type vi secretion system effector-immunity co pseudomonas protegens 0.65 51.0 3.93e-01 88.7% 44.5%
1y7bA01 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.64 49.0 3.07e-01 86.8% 28.6%
1plqA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.64 43.0 2.81e-01 71.7% 43.8%
4a8jB00 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.63 47.0 3.18e-01 83.0% 90.5%
1d5rA02 2.60.40.1110 Mainly Beta › Sandwich › Immunoglobulin-like › 0.63 53.0 4.03e-01 96.2% 70.7%
1wiiA01 2.20.25.190 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.63 47.0 4.50e-01 81.1% 85.5%
1u7bA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.62 52.0 3.35e-01 94.3% 46.6%
4i14A02 3.40.50.10990 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › GTP cyclohydrolase II 0.62 53.0 4.08e-01 100.0% 73.8%
2a1vA00 3.90.1150.30 Alpha Beta › Alpha-Beta Complex › Aspartate Aminotransferase, domain 1 › 0.62 53.0 3.99e-01 100.0% 72.5%
3k1lA02 3.30.457.30 Alpha Beta › 2-Layer Sandwich › Copper Amine Oxidase; Chain A, domain 1 › 0.62 53.0 4.47e-01 98.1% 81.1%
2ciuA00 3.10.450.320 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › Mitochondrial import inner membrane translocase subunit Tim21 0.62 45.0 3.60e-01 83.0% 46.3%
4z48A00 2.50.20.10 Mainly Beta › Clam › outer membrane lipoprotein receptor (LolB), chain A › Lipoprotein localisation LolA/LolB/LppX 0.61 52.0 3.44e-01 100.0% 29.2%
3lygA00 3.10.450.50 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.61 50.0 4.00e-01 100.0% 86.7%
1d7bA00 2.60.40.1210 Mainly Beta › Sandwich › Immunoglobulin-like › Cellobiose dehydrogenase, cytochrome domain 0.61 44.0 3.12e-01 81.1% 60.0%
2ecfA01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.61 54.0 3.18e-01 100.0% 15.5%
4jhyA00 3.30.530.80 Alpha Beta › 2-Layer Sandwich › Alpha-D-Glucose-1,6-Bisphosphate; Chain A, domain 4 › 0.61 50.0 3.67e-01 96.2% 49.4%
4rzkA00 2.60.40.790 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 41.0 3.54e-01 71.7% 93.1%
4ebgA00 3.10.450.560 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.60 45.0 3.80e-01 84.9% 47.4%
6eotD01 2.140.10.30 Mainly Beta › 8 Propeller › Methanol Dehydrogenase; Chain A › Dipeptidylpeptidase IV, N-terminal domain 0.60 52.0 3.00e-01 100.0% 28.3%
2pvpA02 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.60 40.0 2.97e-01 73.6% 25.3%
1bxgA01 3.40.50.10860 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Leucine Dehydrogenase, chain A, domain 1 0.59 47.0 3.55e-01 88.7% 74.8%
2nvmA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.59 43.0 3.58e-01 81.1% 51.0%
3g7nB00 3.40.50.1820 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › Alpha/Beta hydrolase fold, catalytic domain 0.59 48.0 3.17e-01 96.2% 60.3%
3cqyB01 3.30.420.40 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › ATPase, nucleotide binding domain 0.59 45.0 3.14e-01 83.0% 42.9%
2nwvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.59 43.0 3.56e-01 83.0% 48.2%
3omzA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.59 48.0 3.88e-01 90.6% 47.6%
3holA03 2.40.128.240 Mainly Beta › Beta Barrel › Lipocalin › 0.59 44.0 3.88e-01 86.8% 53.9%
2nlvA00 3.30.310.110 Alpha Beta › 2-Layer Sandwich › TATA-Binding Protein › XisI-like 0.59 42.0 3.49e-01 81.1% 46.4%
2kieA00 2.30.29.110 Mainly Beta › Roll › PH-domain like › 0.59 44.0 3.45e-01 83.0% 61.3%
2wozA00 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.59 52.0 3.22e-01 100.0% 30.6%
3gvzA00 3.60.60.10 Alpha Beta › 4-Layer Sandwich › Penicillin V Acylase; Chain A › Penicillin V Acylase; Chain A 0.59 48.0 3.17e-01 96.2% 89.5%
3bn0A00 3.30.1320.10 Alpha Beta › 2-Layer Sandwich › S16 Ribosomal Protein; Chain: A; › Ribosomal protein S16 0.58 49.0 4.11e-01 98.1% 53.7%
1i99I02 2.30.39.10 Mainly Beta › Roll › Alpha-1-antitrypsin; domain 1 › Alpha-1-antitrypsin, domain 1 0.58 50.0 3.92e-01 100.0% 92.3%
6ro0F00 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.57 43.0 3.61e-01 83.0% 77.6%
1wquA00 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 47.0 3.81e-01 98.1% 73.7%
2l2nA00 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 49.0 4.49e-01 100.0% 78.9%
7r97A02 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 49.0 4.58e-01 100.0% 79.4%
4id2A00 2.40.128.510 Mainly Beta › Beta Barrel › Lipocalin › Protein of unknown function DUF4738 0.57 48.0 3.61e-01 96.2% 57.4%
1whqA01 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.57 48.0 4.46e-01 100.0% 77.5%
8gq6A01 2.120.10.80 Mainly Beta › 6 Propeller › Neuraminidase › Kelch-type beta propeller 0.57 51.0 3.19e-01 100.0% 33.7%
1yuaA02 2.20.25.10 Mainly Beta › Single Sheet › N-terminal domain of TfIIb › 0.57 41.0 4.09e-01 83.0% 79.3%
2oq1A03 3.30.505.10 Alpha Beta › 2-Layer Sandwich › SHC Adaptor Protein › SH2 domain 0.57 47.0 3.90e-01 96.2% 65.0%
3c5mA00 2.130.10.10 Mainly Beta › 7 Propeller › Methylamine Dehydrogenase; Chain H › YVTN repeat-like/Quinoprotein amine dehydrogenase 0.56 50.0 2.97e-01 98.1% 23.7%
2qz5A00 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.56 41.0 3.09e-01 83.0% 40.8%
1vq8N00 3.30.420.100 Alpha Beta › 2-Layer Sandwich › Nucleotidyltransferase; domain 5 › 0.56 41.0 2.93e-01 84.9% 37.6%
5c0pA00 2.115.10.20 Mainly Beta › 5 Propeller › Tachylectin-2; Chain A › Glycosyl hydrolase domain; family 43 0.55 45.0 2.94e-01 100.0% 34.9%
2xf4A00 3.60.15.10 Alpha Beta › 4-Layer Sandwich › Metallo-beta-lactamase; Chain A › Ribonuclease Z/Hydroxyacylglutathione hydrolase-like 0.54 41.0 2.94e-01 94.3% 28.6%
2oap202 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.53 45.0 2.92e-01 100.0% 66.8%
1mwsA04 3.40.710.10 Alpha Beta › 3-Layer(aba) Sandwich › Beta-lactamase › DD-peptidase/beta-lactamase superfamily 0.53 43.0 2.75e-01 100.0% 67.4%
2gnxA02 3.30.450.240 Alpha Beta › 2-Layer Sandwich › Beta-Lactamase › 0.52 45.0 3.55e-01 96.2% 47.7%
2pmaA01 2.40.70.10 Mainly Beta › Beta Barrel › Cathepsin D, subunit A; domain 1 › Acid Proteases 0.51 39.0 3.22e-01 96.2% 59.5%
1d5aA01 3.30.342.10 Alpha Beta › 2-Layer Sandwich › DNA Polymerase; Chain A, domain 1 › DNA Polymerase, chain B, domain 1 0.51 35.0 2.70e-01 77.4% 79.5%
5a2fA01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 43.0 3.51e-01 100.0% 72.6%
1txdA02 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 35.0 2.84e-01 84.9% 33.9%
ECOD (88)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4596146 243.1.1.104 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like › Imm-NTF2 0.78 59.0 4.36e-01 81.1% 38.5%
3415735 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.76 62.0 5.04e-01 88.7% 53.7%
3524397 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.76 61.0 4.03e-01 88.7% 38.6%
3627791 5.1.4.94 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Det1 0.75 52.0 3.13e-01 71.7% 25.9%
3697999 109.4.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › ARM repeat › ARM repeat 0.75 51.0 3.22e-01 71.7% 15.3%
3913830 5.1.3.165 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_3, Kelch_KLHDC2_KLHL20_DRC7 0.74 60.0 3.61e-01 86.8% 29.7%
3585692 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.74 61.0 4.36e-01 90.6% 34.7%
3872685 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.74 59.0 3.90e-01 88.7% 41.4%
5052436 319.1.1.0 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones 0.73 47.0 4.09e-01 71.7% 43.8%
4936581 331.10.2.0 ↗ a+b two layers › TBP-like › S-adenosylmethionine decarboxylase-related › Bacterial S-adenosylmethionine decarboxylase 0.73 66.0 5.59e-01 100.0% 70.6%
3385295 5.1.3.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed 0.72 51.0 3.33e-01 88.7% 17.0%
3998221 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.72 49.0 3.53e-01 71.7% 26.9%
3600915 77.3.1.0 ↗ beta meanders › open-sided beta-meander › CPAP G-box domain › CPAP G-box domain 0.72 58.0 3.51e-01 92.5% 21.3%
3616263 319.1.1.1 ↗ beta sandwiches › HSP20-like › HSP20-like chaperones › HSP20-like chaperones › HSP20 0.72 49.0 3.92e-01 71.7% 39.0%
5063704 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.71 54.0 5.09e-01 94.3% 67.7%
3167601 216.1.1.20 ↗ a+b two layers › UBC-like › UBC-like › UBC-like › UBC_like 0.71 62.0 5.11e-01 98.1% 54.7%
3061339 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.71 62.0 3.69e-01 100.0% 35.9%
3626364 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.70 56.0 4.36e-01 96.2% 40.9%
4029963 375.1.1.26 ↗ few secondary structure elements › Rubredoxin-like › Rubredoxin-related › Rubredoxin-related › Rpr2 0.70 46.0 3.59e-01 73.6% 31.3%
3395269 5.1.3.147 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Beta-prop_ATRN-LZTR1 0.70 63.0 3.71e-01 100.0% 36.3%
None — 0.70 57.0 4.41e-01 90.6% 43.3%
3559550 11.1.1.179 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › Ig_3 0.69 54.0 3.12e-01 84.9% 18.6%
None — 0.69 59.0 3.29e-01 98.1% 10.8%
4016769 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.69 61.0 4.10e-01 100.0% 32.0%
3594374 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.69 59.0 3.65e-01 100.0% 45.4%
3779483 5.1.4.136 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Ig_3 0.69 53.0 3.04e-01 83.0% 18.2%
3849532 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.69 61.0 4.05e-01 100.0% 35.2%
4032294 3389.1.1.1 ↗ a+b two layers › hypothetical protein SAV0303 › hypothetical protein SAV0303 › hypothetical protein SAV0303 › DUF4467 0.69 53.0 4.37e-01 84.9% 49.0%
4966333 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 51.0 4.85e-01 83.0% 67.7%
3965967 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.68 54.0 4.43e-01 92.5% 47.0%
3247100 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.68 54.0 3.47e-01 88.7% 32.0%
None — 0.67 54.0 3.31e-01 86.8% 28.6%
3611509 5.1.3.116 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_KLHDC2_KLHL20_DRC7 0.67 61.0 3.54e-01 100.0% 29.5%
4927100 4312.1.1.0 ↗ a+b two layers › RelE-like › RelE-like › RelE-like 0.67 46.0 3.88e-01 75.5% 42.2%
4004358 252.2.1.3 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › Arm-DNA-bind_1 0.67 45.0 4.66e-01 81.1% 74.0%
3338677 5.1.3.6 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1 0.67 52.0 3.21e-01 86.8% 13.8%
5072816 2004.1.1.146 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › ATPase 0.67 49.0 3.25e-01 81.1% 88.9%
5033616 246.2.1.1 ↗ a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.67 57.0 3.68e-01 98.1% 98.1%
3753034 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.67 52.0 3.13e-01 86.8% 18.0%
3741520 5.1.3.137 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_KLHDC2_KLHL20_DRC7 0.67 59.0 3.52e-01 100.0% 14.2%
3716988 5.1.4.8 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › CNH 0.67 56.0 3.35e-01 90.6% 22.7%
3884092 5.1.3.175 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_2, Kelch_3, Kelch_KLHDC2_KLHL20_DRC7 0.66 61.0 3.67e-01 100.0% 31.8%
3685533 844.1.1.0 ↗ beta barrels › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain › Transcriptional factor tubby, C-terminal domain 0.66 52.0 3.52e-01 88.7% 37.7%
3913735 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.66 56.0 3.89e-01 96.2% 40.0%
3496419 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.66 58.0 3.21e-01 100.0% 23.0%
5014318 243.3.1.0 ↗ a+b two layers › Cystatin-like › Cystatin/monellin › Cystatin/monellin 0.66 51.0 4.60e-01 86.8% 65.3%
3496663 5.1.5.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed 0.66 54.0 3.44e-01 100.0% 17.8%
3516546 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.66 57.0 3.91e-01 98.1% 40.0%
4983589 2005.1.1.10 ↗ a/b three-layered sandwiches › HUP domain-like › HUP domains › HUP domains › ETF 0.65 46.0 3.12e-01 75.5% 29.5%
3403871 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.65 57.0 3.81e-01 100.0% 38.5%
3264545 5.1.3.117 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1+Kelch_KLHDC2_KLHL20_DRC7 0.65 59.0 3.50e-01 100.0% 25.7%
3391302 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.65 50.0 3.17e-01 88.7% 33.0%
4139105 243.6.1.9 ↗ a+b two layers › Cystatin-like › Pre-PUA domain › Pre-PUA domain › TGT_C2 0.64 53.0 3.74e-01 96.2% 29.4%
943 220.1.1.47 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_16 0.64 45.0 3.66e-01 75.5% 68.0%
3592067 243.4.1.0 ↗ a+b two layers › Cystatin-like › DsbC/DsbG N-terminal domain-like › DsbC/DsbG N-terminal domain-like 0.63 47.0 3.35e-01 83.0% 25.6%
5043655 2484.1.1.0 ↗ mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like 0.63 45.0 3.37e-01 81.1% 29.3%
4957015 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.62 53.0 3.63e-01 96.2% 36.3%
4028363 243.1.1.0 ↗ a+b two layers › Cystatin-like › NTF2-like › NTF2-like 0.62 45.0 3.91e-01 81.1% 56.7%
5028142 5.1.4.0 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 42.0 2.65e-01 73.6% 17.5%
3238926 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.61 54.0 3.74e-01 100.0% 39.4%
3479716 3459.1.1.0 ↗ beta sandwiches › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule › Fas apoptotic inhibitory molecule 0.61 48.0 4.19e-01 88.7% 57.6%
2326859 330.21.1.0 ↗ a+b two layers › dsRBD-like 0.61 48.0 4.11e-01 92.5% 68.1%
3924385 1.1.15.0 ↗ beta barrels › cradle loop barrel › RIFT-related › PK beta-barrel domain-like 0.61 51.0 3.24e-01 100.0% 37.0%
3722465 5.1.5.54 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 8-bladed › Beta-prop_NOL10_N 0.61 53.0 3.16e-01 98.1% 26.2%
5029609 2004.1.1.42 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › T2SSE 0.61 50.0 2.99e-01 94.3% 43.5%
3684267 5.1.10.15 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 12-bladed › RPE65 0.61 49.0 3.72e-01 92.5% 36.9%
3937921 5.1.3.170 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Beta-prop_IFT140_2nd 0.61 51.0 3.19e-01 98.1% 24.8%
3870468 5.1.4.1 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › WD40 0.60 48.0 2.86e-01 100.0% 10.7%
4026577 252.2.1.1 ↗ a+b two layers › DNA-binding domain › GCC-box binding domain-like › GCC-box binding domain-like › AP2 0.60 41.0 4.13e-01 73.6% 76.4%
185709 3389.1.1.1 ↗ a+b two layers › hypothetical protein SAV0303 › hypothetical protein SAV0303 › hypothetical protein SAV0303 › DUF4467 0.60 45.0 3.81e-01 84.9% 47.9%
2770114 5.1.4.301 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7 0.60 52.0 3.20e-01 100.0% 38.8%
3901454 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.60 51.0 3.46e-01 100.0% 41.0%
3623943 391.1.1.7 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.59 43.0 3.92e-01 79.2% 81.3%
6662 4276.1.1.1 ↗ a+b two layers › XisI-like › XisI-like › XisI-like › XisI 0.59 43.0 3.56e-01 83.0% 48.2%
3930621 2007.1.2.0 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I 0.59 50.0 3.48e-01 98.1% 39.5%
3899247 2007.1.2.4 ↗ a/b three-layered sandwiches › Flavodoxin-like › Class I glutamine amidotransferase-like › Periplasmic binding protein-like I › ANF_receptor 0.59 51.0 3.57e-01 100.0% 37.3%
5052205 2004.1.1.198 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › AAA_23 0.58 43.0 2.49e-01 86.8% 16.5%
3768845 4294.1.1.0 ↗ few secondary structure elements › Trm112p-like › Trm112p-like › Trm112p-like 0.58 44.0 3.58e-01 84.9% 75.2%
3484306 922.1.1.0 ↗ few secondary structure elements › TSP-1 type 1 repeat › TSP-1 type 1 repeat › TSP-1 type 1 repeat 0.57 41.0 4.26e-01 79.2% 100.0%
3783937 7516.1.1.18 ↗ a/b three-layered sandwiches › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Nucleotide-diphospho-sugar transferases › Anp1 0.57 44.0 2.75e-01 88.7% 49.6%
3214385 391.1.1.7 ↗ few secondary structure elements › Fibronectin type I module-like › Fibronectin type I module-like › Fibronectin type I module › Fn1_2 0.56 40.0 3.79e-01 81.1% 81.4%
4363733 4312.1.1.13 ↗ a+b two layers › RelE-like › RelE-like › RelE-like › Toxin_YhaV 0.56 46.0 3.49e-01 98.1% 48.3%
3314307 5.1.3.65 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › DUF295 0.56 47.0 2.90e-01 98.1% 25.4%
3941379 11.1.1.53 ↗ beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › DOMON 0.55 44.0 3.13e-01 92.5% 60.0%
3721708 5.1.3.135 ↗ beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 6-bladed › Kelch_1, Kelch_KLHDC2_KLHL20_DRC7, Beta-prop_ATRN-LZTR1 0.55 47.0 2.91e-01 100.0% 24.7%
3740759 4099.1.1.3 ↗ a+b two layers › Kinetochore globular domain-like › Kinetochore globular domain-like › Kinetochore globular domain-like › Spc24 0.53 46.0 4.51e-01 100.0% 88.3%
3584249 220.1.1.132 ↗ beta barrels › PH domain-like › PH domain-like › PH domain-like › KRIT1_FRMD8_FERM_C 0.52 44.0 3.55e-01 98.1% 88.2%
3308710 101.1.1.0 ↗ alpha arrays › HTH › HTH › Three-helical HTH 0.50 43.0 3.97e-01 100.0% 77.1%
D3 medium residues 65-119_176-203
PDB
Domain cluster: representative
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1fxkB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.90 67.0 6.04e-01 77.1% 89.9%
1nt2B02 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.89 63.0 7.02e-01 73.5% 95.5%
1cxzB00 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.87 67.0 6.61e-01 79.5% 77.9%
2ke4A00 6.10.140.470 Special › Helix non-globular › Helix Hairpins › 0.87 66.0 6.19e-01 79.5% 70.4%
1ydxA02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.86 68.0 6.61e-01 83.1% 90.0%
4l0rB00 1.20.58.90 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.85 64.0 6.82e-01 78.3% 89.0%
3l9fA02 6.10.140.1570 Special › Helix non-globular › Helix Hairpins › 0.85 61.0 6.23e-01 74.7% 81.5%
2fb5A01 1.10.287.770 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › YojJ-like 0.84 63.0 6.71e-01 78.3% 93.1%
3lssA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.83 72.0 6.43e-01 91.6% 83.9%
1z6oM00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.82 59.0 4.36e-01 81.9% 31.9%
2oduA02 1.20.58.60 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.82 62.0 5.65e-01 78.3% 61.9%
3qo8A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.81 70.0 6.35e-01 91.6% 83.0%
2bdeA03 1.20.58.1160 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.81 57.0 5.92e-01 83.1% 79.2%
6r1nA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.80 69.0 6.37e-01 91.6% 86.4%
4lwsA00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.80 59.0 5.57e-01 78.3% 72.0%
4ciuA02 3.40.50.300 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › P-loop containing nucleotide triphosphate hydrolases 0.80 72.0 5.35e-01 96.4% 77.6%
1rq0A01 6.10.140.160 Special › Helix non-globular › Helix Hairpins › 0.78 71.0 7.11e-01 96.4% 100.0%
3icxA01 1.10.287.660 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.78 57.0 5.97e-01 79.5% 84.0%
2dq0A01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.78 70.0 6.34e-01 95.2% 89.7%
4gzrB00 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.78 55.0 5.75e-01 73.5% 88.3%
4ioeA00 1.10.287.850 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HP0062-like domain 0.78 60.0 5.92e-01 81.9% 87.4%
3r84B00 6.10.280.160 Special › Helix non-globular › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Mediator of RNA polymerase II transcription subunit 22 0.75 55.0 5.64e-01 77.1% 83.7%
3k29A00 1.10.287.1700 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.74 56.0 4.45e-01 79.5% 60.9%
6tkvA01 1.10.287.1060 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › ESAT-6-like 0.74 58.0 6.34e-01 88.0% 100.0%
6h9xA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.73 62.0 5.75e-01 91.6% 85.3%
1wleA01 1.10.287.40 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Serine-tRNA synthetase, tRNA binding domain 0.72 58.0 5.25e-01 88.0% 87.7%
1yf2A02 1.10.287.1120 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Bipartite methylase S protein 0.72 55.0 5.12e-01 83.1% 86.9%
1m5iA00 1.10.287.450 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Helix hairpin bin 0.70 61.0 5.59e-01 91.6% 93.3%
2gd5A00 6.10.140.1230 Special › Helix non-globular › Helix Hairpins › 0.69 60.0 5.02e-01 95.2% 66.2%
1yg2A02 6.10.140.190 Special › Helix non-globular › Helix Hairpins › 0.69 51.0 5.01e-01 78.3% 74.4%
2p4vA01 1.10.287.180 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › Transcription elongation factor, GreA/GreB, N-terminal domain 0.68 49.0 5.08e-01 77.1% 84.2%
4q4hB01 1.20.1560.10 Mainly Alpha › Up-down Bundle › ABC transporter transmembrane region fold › ABC transporter type 1, transmembrane domain 0.67 52.0 3.50e-01 84.3% 21.9%
2rdcA00 1.10.287.800 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › protein ne1242 0.66 56.0 4.76e-01 94.0% 57.1%
4iggA01 1.10.287.160 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › HR1 repeat 0.66 48.0 5.17e-01 77.1% 95.5%
6ynwH01 1.20.20.10 Mainly Alpha › Up-down Bundle › F1FO ATP Synthase › F1F0 ATP synthase subunit C 0.66 48.0 5.02e-01 77.1% 95.9%
2g38B00 1.20.1260.20 Mainly Alpha › Up-down Bundle › Ferritin › PPE superfamily 0.65 58.0 4.59e-01 100.0% 81.5%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.65 49.0 5.17e-01 83.1% 91.7%
3pltA00 1.20.1270.60 Mainly Alpha › Up-down Bundle › Substrate Binding Domain Of Dnak; Chain:A; Domain 2 › Arfaptin homology (AH) domain/BAR domain 0.65 56.0 4.26e-01 100.0% 69.2%
4e40A00 1.20.1260.80 Mainly Alpha › Up-down Bundle › Ferritin › 0.64 55.0 4.01e-01 98.8% 74.3%
3vnxA00 1.20.1260.10 Mainly Alpha › Up-down Bundle › Ferritin › Ferritin, core subunit, four-helix bundle 0.57 49.0 3.85e-01 100.0% 65.6%
4e6hA00 1.25.40.1040 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › 0.54 47.0 2.89e-01 100.0% 69.4%
4wesB03 1.20.89.10 Mainly Alpha › Up-down Bundle › Nitrogenase Molybdenum-iron Protein, subunit B; domain 4 › Nitrogenase Molybdenum-iron Protein, subunit B, domain 4 0.51 36.0 3.74e-01 77.1% 100.0%
ECOD (46)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4112797 5086.1.1.0 ↗ alpha bundles › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins › helical hairpin of HlyD-like secretion proteins 0.93 70.0 5.11e-01 78.3% 47.7%
4983118 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.90 68.0 6.48e-01 78.3% 83.2%
4003222 192.8.1.0 ↗ alpha bundles › Long alpha-hairpin › Eukaryotic DNA topoisomerase I, dispensable insert domain › Eukaryotic DNA topoisomerase I, dispensable insert domain 0.89 71.0 6.57e-01 81.9% 75.0%
5042020 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.89 67.0 6.52e-01 78.3% 72.2%
3559003 192.2.1.1 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › Prefoldin_2 0.89 68.0 6.32e-01 79.5% 66.0%
3657123 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.88 69.0 6.55e-01 81.9% 84.2%
3487203 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.87 69.0 6.85e-01 81.9% 80.0%
3520009 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.87 67.0 6.83e-01 79.5% 82.5%
3737505 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.87 66.0 6.92e-01 78.3% 86.7%
4406698 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.87 65.0 6.22e-01 78.3% 68.4%
4956566 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.87 65.0 6.52e-01 78.3% 76.5%
3940087 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.87 66.0 6.76e-01 79.5% 82.5%
4018440 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.86 66.0 6.27e-01 79.5% 69.5%
3712648 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.86 65.0 4.81e-01 78.3% 34.2%
3693881 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.86 65.0 7.03e-01 78.3% 92.9%
4024277 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.86 65.0 6.81e-01 78.3% 86.7%
3240117 632.22.1.0 ↗ alpha bundles › immunoglobulin/albumin-binding domain-like › Cell division protein EzrA repeats › Cell division protein EzrA repeats 0.86 65.0 6.35e-01 79.5% 81.1%
5011532 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.85 64.0 6.12e-01 78.3% 68.4%
4163282 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.85 65.0 4.87e-01 79.5% 35.7%
4945931 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.85 64.0 6.93e-01 78.3% 92.9%
5026881 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.85 64.0 6.73e-01 78.3% 86.7%
3699098 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.85 64.0 6.51e-01 78.3% 81.2%
3273862 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.85 66.0 6.31e-01 81.9% 85.3%
4384750 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.84 63.0 6.03e-01 78.3% 68.4%
4937862 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.84 64.0 5.76e-01 79.5% 60.0%
4969095 2004.1.1.0 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.83 58.0 3.56e-01 79.5% 14.2%
4001187 3755.3.1.0 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.83 62.0 4.78e-01 78.3% 60.0%
3730125 4323.1.1.1 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › V_ATPase_I 0.83 70.0 5.42e-01 88.0% 65.6%
3776400 192.5.1.1 ↗ alpha bundles › Long alpha-hairpin › HR1 repeat › HR1 repeat › HR1 0.82 67.0 6.89e-01 88.0% 90.0%
3613932 192.2.1.0 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin 0.82 65.0 5.75e-01 83.1% 83.5%
3550436 192.7.1.0 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm 0.82 61.0 5.66e-01 78.3% 62.5%
5047544 3755.4.1.0 ↗ alpha bundles › YscO-like › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain › Phosphatidylinositol 3-kinase regulatory subunit inter-SH2 domain 0.82 59.0 4.84e-01 75.9% 44.1%
4128407 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.82 70.0 6.34e-01 91.6% 86.4%
3291561 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.81 60.0 6.31e-01 78.3% 88.0%
4655883 3291.1.1.0 ↗ alpha bundles › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related › Charged multivesicular body protein 3 (CHMP3)-related 0.80 61.0 5.69e-01 79.5% 72.0%
4219218 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.80 71.0 6.44e-01 96.4% 86.4%
4041347 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.79 71.0 6.38e-01 96.4% 86.4%
4979981 192.7.1.2 ↗ alpha bundles › Long alpha-hairpin › tRNA-binding arm › tRNA-binding arm › Seryl_tRNA_N 0.78 70.0 6.34e-01 96.4% 86.4%
5041271 605.1.1.1 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase › HisKA 0.74 57.0 5.95e-01 81.9% 92.0%
3560590 3755.3.1.142 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C 0.74 66.0 5.34e-01 96.4% 77.3%
3852832 3922.1.1.72 ↗ alpha bundles › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › Helical domain in structural maintenance of chromosomes protein 3 › FAM186A-B_C 0.73 65.0 5.33e-01 98.8% 79.3%
4157008 3755.3.1.142 ↗ alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin › FAM186A-B_C 0.73 64.0 5.32e-01 97.6% 80.7%
4014055 611.7.1.19 ↗ alpha bundles › N-cbl like › Mixed lineage kinase domain-like (MLKL) N-terminal domain › Mixed lineage kinase domain-like (MLKL) N-terminal domain › NACHT_N 0.72 66.0 5.26e-01 98.8% 80.0%
3767783 192.2.1.19 ↗ alpha bundles › Long alpha-hairpin › Prefoldin › Prefoldin › FAM186A-B_C 0.71 55.0 4.50e-01 81.9% 48.7%
3407094 4323.1.1.0 ↗ alpha bundles › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C › helical bundle domain in vacuolar ATP synthase subunit C 0.70 57.0 4.70e-01 89.2% 69.3%
4805104 601.19.1.1 ↗ alpha bundles › Four-helical up-and-down bundle › Apolipoprotein › Apolipoprotein › Apolipoprotein 0.65 49.0 4.97e-01 81.9% 81.9%
D4 medium residues 120-175
PDB
Domain cluster: representative
CATH (19)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
2ahmG01 6.10.250.2820 Special › Helix non-globular › Single alpha-helices involved in coiled-coils or other helix-helix interfaces › 0.68 50.0 4.10e-01 76.8% 47.5%
6xkyA01 1.20.1330.10 Mainly Alpha › Up-down Bundle › f41 fragment of flagellin, N-terminal domain › f41 fragment of flagellin, N-terminal domain 0.68 58.0 4.10e-01 100.0% 60.4%
3behB01 1.20.120.540 Mainly Alpha › Up-down Bundle › Four Helix Bundle (Hemerythrin (Met), subunit A) › Voltage-gated potassium channels 0.68 57.0 4.63e-01 100.0% 88.9%
1y6xA00 1.10.287.1080 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › MazG-like 0.67 48.0 4.20e-01 76.8% 51.7%
6srbA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.65 50.0 4.13e-01 87.5% 59.6%
2gw1A02 1.25.40.10 Mainly Alpha › Alpha Horseshoe › Serine Threonine Protein Phosphatase 5, Tetratricopeptide repeat › Tetratricopeptide repeat domain 0.65 48.0 3.00e-01 83.9% 68.1%
2chnB03 1.20.58.460 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › Hyaluronidase post-catalytic domain-like 0.63 50.0 3.57e-01 89.3% 47.2%
1d2dA00 1.10.287.10 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › S15/NS1, RNA-binding 0.62 43.0 4.39e-01 75.0% 83.9%
1vnsA01 1.20.144.10 Mainly Alpha › Up-down Bundle › Vanadium-containing Chloroperoxidase; domain 1 › Phosphatidic acid phosphatase type 2/haloperoxidase 0.61 49.0 3.60e-01 94.6% 81.1%
6ljaA01 1.50.10.100 Mainly Alpha › Alpha/alpha barrel › Glycosyltransferase › Chondroitin AC/alginate lyase 0.61 51.0 3.17e-01 98.2% 45.0%
4pklA00 1.20.920.10 Mainly Alpha › Up-down Bundle › Histone Acetyltransferase; Chain A › Bromodomain-like 0.59 43.0 3.61e-01 82.1% 51.8%
4h63H01 1.20.58.1710 Mainly Alpha › Up-down Bundle › Methane Monooxygenase Hydroxylase; Chain G, domain 1 › 0.57 42.0 3.90e-01 78.6% 66.7%
2w2kA02 3.40.50.720 Alpha Beta › 3-Layer(aba) Sandwich › Rossmann fold › NAD(P)-binding Rossmann-like Domain 0.56 46.0 3.13e-01 89.3% 50.0%
3r2qA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.55 47.0 3.83e-01 100.0% 86.7%
1m56C01 1.10.287.70 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.54 39.0 3.69e-01 76.8% 71.0%
1hqoA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 45.0 3.57e-01 100.0% 80.2%
4mk3A02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.54 43.0 3.64e-01 100.0% 100.0%
4gltA02 1.20.1050.10 Mainly Alpha › Up-down Bundle › Glutathione S-transferase Yfyf (Class Pi); Chain A, domain 2 › 0.53 44.0 3.66e-01 100.0% 86.8%
3ne5B04 6.10.140.730 Special › Helix non-globular › Helix Hairpins › 0.50 40.0 4.15e-01 89.3% 100.0%
ECOD (8)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2393375 633.16.1.1 ↗ alpha bundles › Bromodomain-like › PMT helical bundle domain-like › PMT helical bundle domain-like › MLD 0.71 51.0 4.50e-01 75.0% 53.8%
3482207 109.3.1.0 ↗ alpha superhelices › Repetitive alpha hairpins › Ankyrin repeat › Ankyrin repeat 0.70 55.0 3.74e-01 87.5% 51.6%
3832084 605.1.1.0 ↗ alpha duplicates or obligate multimers › ROP-like › Homodimeric domain of signal transducing histidine kinase › Homodimeric domain of signal transducing histidine kinase 0.65 49.0 4.49e-01 82.1% 81.3%
3738358 603.1.1.0 ↗ alpha bundles › STAT-like › t-snare proteins › t-snare proteins 0.64 50.0 4.62e-01 87.5% 76.0%
4600223 616.1.1.33 ↗ alpha arrays › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › S15/NS1 RNA-binding domain › UPF0262 0.64 53.0 4.00e-01 94.6% 48.3%
4091592 2004.1.1.29 ↗ a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases › DEAD 0.61 53.0 3.08e-01 100.0% 17.1%
3676512 5081.1.1.1 ↗ alpha bundles › Rhomboid-like › Rhomboid-like › Rhomboid-like › Rhomboid 0.61 51.0 3.51e-01 100.0% 67.3%
1153944 109.1.1.6 ↗ alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › GST_C_2 0.54 45.0 3.61e-01 100.0% 81.6%
D5 medium residues 204-264
PDB
Domain cluster: rep: HOAR__YP_010087005__Spodoptera_eridania_nucleopolyhedrovirus__2315721__D185-234