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hypothetical_protein_1

Euk-Vir

Hubei_sobemo-like_virus_12

hypothetical_protein_1__YP_009329978__Hubei_sobemo-like_virus_12__1923197

Identity

Accession:
YP_009329978 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

65.7 mean pLDDT

Taxonomy

Hubei_sobemo-like_virus_12

TaxID: 1923197

Cluster

View cluster (38 members)

3D Structure

Download PDB Download Scores JSON

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 high residues 2-142
PDB
Domain cluster: rep: uncovered_polypeptide_polyprotein__YP_529550_615-1154__Newbury_agent_1__331642__D396-536
CATH (8)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 50.0 5.87e-01 82.3% 86.1%
4ri0A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.79 75.0 6.56e-01 100.0% 74.2%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.75 47.0 5.18e-01 82.3% 76.5%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.75 71.0 6.46e-01 100.0% 84.4%
1lvbA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 44.0 5.00e-01 80.1% 82.4%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 44.0 5.34e-01 96.5% 96.8%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 46.0 5.50e-01 96.5% 100.0%
1v0fB03 2.40.30.20 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › 0.55 29.0 3.59e-01 77.3% 82.4%
ECOD (16)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
2710030 1.1.5.12 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S39 0.88 84.0 7.43e-01 100.0% 79.6%
2472950 1.1.5.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.85 82.0 7.32e-01 100.0% 82.2%
3394133 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.84 80.0 6.66e-01 100.0% 81.3%
4028467 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 79.0 6.18e-01 100.0% 56.4%
3452728 1.1.17.3 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.83 78.0 6.77e-01 100.0% 81.0%
134018 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 75.0 7.09e-01 100.0% 83.3%
3464880 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.82 77.0 6.58e-01 100.0% 75.3%
3412624 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 76.0 6.31e-01 100.0% 79.6%
3816110 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 76.0 6.38e-01 100.0% 65.3%
260 1.1.5.22 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S32 0.80 69.0 6.09e-01 100.0% 64.6%
3672433 1.1.5.33 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 75.0 5.81e-01 100.0% 54.5%
3280223 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.79 74.0 6.54e-01 100.0% 78.5%
22055 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 73.0 6.50e-01 100.0% 86.4%
3277840 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.77 72.0 6.28e-01 100.0% 81.9%
4934715 1.1.17.0 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.76 71.0 5.92e-01 100.0% 79.9%
4614564 1.1.17.1 ↗ beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.76 71.0 6.29e-01 100.0% 82.6%
D2 high residues 154-209
PDB