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hypothetical_protein_1

Euk-Vir

Hubei_sobemo-like_virus_5

hypothetical_protein_1__YP_009330006__Hubei_sobemo-like_virus_5__1923238

Identity

Accession:
YP_009330006 ↗
Protein ID:
hypothetical_protein_1
Kingdom:
euk

Quality

56.8 mean pLDDT

Taxonomy

TaxID: 1923238

Cluster

Singleton — not in a non-trivial cluster

3D Structure

Domains

high = three domain segmentations agree, medium = two domain segmentations agree. Numbered high-first then medium, N→C within each tier.

D1 medium residues 3-89
PDB
D2 medium residues 133-145_237-322
PDB
CATH (37)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1zyoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.86 75.0 7.50e-01 91.9% 100.0%
1mbmA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.85 57.0 6.59e-01 77.8% 93.1%
1wczA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.84 76.0 7.21e-01 97.0% 93.0%
5hmaA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 67.0 6.58e-01 84.8% 98.1%
5fahA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.83 72.0 6.77e-01 91.9% 100.0%
3h7oB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 64.0 6.08e-01 80.8% 100.0%
1p3cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 71.0 6.95e-01 90.9% 100.0%
1azzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.82 70.0 6.52e-01 89.9% 100.0%
4ic5A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 65.0 6.45e-01 84.8% 93.3%
2rdlA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 69.0 6.48e-01 89.9% 100.0%
3s9cA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 69.0 6.41e-01 89.9% 100.0%
1eq9A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.81 68.0 6.44e-01 89.9% 100.0%
1hpgA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 61.0 6.11e-01 78.8% 96.0%
3fzzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 68.0 6.33e-01 89.9% 100.0%
1a7sA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 68.0 6.50e-01 89.9% 100.0%
3h7tB01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.80 66.0 6.13e-01 87.9% 100.0%
5fcrA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 67.0 6.21e-01 89.9% 100.0%
2as9B01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.79 69.0 6.84e-01 91.9% 93.1%
2ijd101 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.78 64.0 5.14e-01 85.9% 96.7%
2w5eA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.78 57.0 6.44e-01 79.8% 100.0%
2hrvA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 59.0 6.09e-01 80.8% 96.8%
1gvzA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 65.0 6.03e-01 89.9% 100.0%
3cp7B02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.77 61.0 6.03e-01 84.8% 95.2%
4fvdA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 58.0 5.98e-01 84.8% 98.9%
1lvoA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 55.0 5.84e-01 79.8% 90.9%
5yjlD01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.67 52.0 4.64e-01 82.8% 94.4%
1wv4B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.66 51.0 4.40e-01 81.8% 86.4%
1ci0B00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.65 49.0 3.95e-01 81.8% 91.2%
3r5lA00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 44.0 4.25e-01 72.7% 97.4%
3dnhA01 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.63 49.0 4.28e-01 83.8% 95.4%
5xamA03 3.30.1360.200 Alpha Beta › 2-Layer Sandwich › Gyrase A; domain 2 › 0.59 41.0 3.84e-01 72.7% 87.3%
7t8tA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.52 38.0 3.52e-01 77.8% 87.8%
1cvrA03 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 30.0 3.18e-01 88.9% 65.1%
4kbxA01 2.40.37.30 Mainly Beta › Beta Barrel › Lyase, Ornithine Decarboxylase; Chain A, domain 1 › 0.51 41.0 3.16e-01 87.9% 93.4%
2vobB02 3.90.1720.10 Alpha Beta › Alpha-Beta Complex › endopeptidase fold (from Nostoc punctiforme) › endopeptidase domain like (from Nostoc punctiforme) 0.51 44.0 3.42e-01 96.0% 68.2%
1cqxA02 2.40.30.10 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Translation factors 0.50 35.0 3.46e-01 73.7% 84.7%
2mc2A00 2.80.10.50 Mainly Beta › Trefoil › Trefoil (Acidic Fibroblast Growth Factor, subunit A) › 0.50 40.0 3.21e-01 87.9% 89.3%
ECOD (59)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
4205419 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.85 78.0 5.77e-01 97.0% 97.0%
4028467 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.85 71.0 4.99e-01 87.9% 72.4%
2472950 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.85 75.0 5.87e-01 91.9% 100.0%
3403377 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.84 73.0 5.31e-01 91.9% 90.8%
2526961 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.84 77.0 5.79e-01 98.0% 94.6%
3280223 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.83 70.0 5.50e-01 88.9% 48.7%
2710030 1.1.5.12 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S39 0.83 76.0 5.95e-01 97.0% 99.5%
3452728 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 70.0 5.38e-01 89.9% 97.6%
5037776 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.82 68.0 5.10e-01 86.9% 46.4%
4387060 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.82 73.0 5.54e-01 94.9% 94.0%
3960372 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.82 64.0 6.92e-01 81.8% 98.8%
None 0.82 73.0 5.57e-01 94.9% 96.2%
3425181 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.82 71.0 5.26e-01 91.9% 94.3%
3464880 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 70.0 5.34e-01 91.9% 93.0%
4561917 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.81 73.0 5.26e-01 94.9% 85.2%
4247805 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.81 73.0 5.58e-01 96.0% 95.3%
3437290 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.81 69.0 5.31e-01 91.9% 98.1%
3462061 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.81 69.0 5.31e-01 91.9% 96.7%
3449628 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.81 65.0 6.22e-01 85.9% 82.6%
3443528 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.80 69.0 5.28e-01 91.9% 98.1%
3611892 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 70.0 5.50e-01 91.9% 97.4%
5063188 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.80 67.0 5.10e-01 88.9% 88.8%
3417330 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.80 67.0 5.13e-01 89.9% 94.4%
3432441 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.80 71.0 5.20e-01 97.0% 90.6%
4934715 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.79 66.0 4.90e-01 87.9% 45.3%
3216440 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.79 70.0 5.06e-01 94.9% 91.9%
3434538 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.79 68.0 5.18e-01 91.9% 95.8%
4254177 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.79 72.0 4.93e-01 98.0% 79.7%
3220497 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.79 64.0 4.89e-01 86.9% 87.3%
3278337 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 66.0 5.15e-01 88.9% 55.9%
3277840 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.78 65.0 5.07e-01 88.9% 52.5%
2141908 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.78 64.0 5.05e-01 87.9% 53.8%
3505064 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.77 66.0 4.77e-01 91.9% 90.9%
3244773 1.1.5.49 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › DUF316 0.77 69.0 4.97e-01 97.0% 90.0%
3433009 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.76 69.0 5.04e-01 99.0% 85.5%
3229867 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.76 65.0 4.70e-01 91.9% 88.4%
3222818 1.1.17.8 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › DUF316 0.75 66.0 4.82e-01 94.9% 89.4%
2779726 1.1.17.2 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Peptidase_C3 0.75 65.0 5.20e-01 92.9% 100.0%
3447771 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.74 62.0 4.61e-01 89.9% 91.3%
3377696 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.74 62.0 4.86e-01 89.9% 96.5%
3394788 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 60.0 4.47e-01 87.9% 89.2%
3615787 1.1.17.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 0.72 59.0 4.52e-01 88.9% 97.8%
4014819 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.72 66.0 4.95e-01 100.0% 69.1%
3387073 1.1.5.16 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › MreC 0.72 55.0 4.31e-01 80.8% 51.8%
1147338 1.1.5.5 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.71 59.0 5.18e-01 87.9% 98.6%
4119987 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.68 49.0 3.79e-01 75.8% 37.3%
4110599 1.1.5.11 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › UbiD 0.67 49.0 3.89e-01 77.8% 88.1%
4993962 1.1.5.11 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › UbiD 0.66 49.0 3.86e-01 78.8% 86.0%
4882551 1.1.5.5 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Pico_P2A 0.65 58.0 5.03e-01 97.0% 100.0%
3509476 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.63 44.0 3.45e-01 71.7% 46.5%
3500586 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.61 49.0 3.71e-01 88.9% 91.2%
2407461 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.60 43.0 3.99e-01 76.8% 80.9%
3342814 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.57 35.0 3.58e-01 75.8% 64.2%
4466506 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.53 30.0 3.44e-01 85.9% 74.7%
3834112 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.53 30.0 3.36e-01 70.7% 70.0%
3997949 4.1.1.9 beta barrels › SH3 › SH3 › SH3 › TUDOR 0.52 37.0 3.84e-01 81.8% 80.0%
3224710 389.1.1.0 few secondary structure elements › EGF-like › EGF-related › EGF/Laminin 0.51 28.0 3.20e-01 70.7% 70.7%
3357709 4.1.1.42 beta barrels › SH3 › SH3 › SH3 › Agenet 0.51 32.0 3.44e-01 77.8% 72.9%
3807907 2492.1.1.60 a+b three layers › Cytidine deaminase-like › Cytidine deaminase-like › Cytidine deaminase-like › dCMP_cyt_deam_1, dCMP_cyt_deam_2 0.50 37.0 2.98e-01 79.8% 100.0%
D3 medium residues 146-236
PDB
CATH (42)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
1a5iA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.73 65.0 5.94e-01 97.8% 89.8%
1m9uA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 65.0 6.14e-01 97.8% 90.8%
2olgA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.72 65.0 5.72e-01 97.8% 90.7%
1shyA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 65.0 6.22e-01 97.8% 89.2%
1ym0A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.71 64.0 5.94e-01 97.8% 86.6%
1qa7A01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.70 63.0 5.91e-01 100.0% 81.8%
3otpA01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.69 56.0 4.31e-01 100.0% 38.9%
3k6yA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.69 57.0 5.68e-01 100.0% 87.0%
4lk4A02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 61.0 6.01e-01 97.8% 100.0%
2o8lA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.68 62.0 5.99e-01 100.0% 100.0%
1dleA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.67 60.0 5.37e-01 100.0% 81.4%
3h7oA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 58.0 5.47e-01 97.8% 86.6%
7pzoA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 58.0 5.73e-01 95.6% 93.8%
3h7tA02 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.66 59.0 5.49e-01 97.8% 82.9%
2ok5A02 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.64 56.0 4.20e-01 95.6% 45.2%
2wv9A01 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.63 50.0 4.00e-01 85.7% 44.8%
2hlcA01 2.40.10.10 Mainly Beta › Beta Barrel › Thrombin, subunit H › Trypsin-like serine proteases 0.61 54.0 5.16e-01 95.6% 88.5%
2ig6A00 2.30.110.10 Mainly Beta › Roll › Pnp Oxidase; Chain A › Electron Transport, Fmn-binding Protein; Chain A 0.60 51.0 4.44e-01 96.7% 78.3%
3ua3A03 2.70.160.11 Mainly Beta › Distorted Sandwich › Hnrnp arginine n-methyltransferase1 › Hnrnp arginine n-methyltransferase1 0.58 47.0 3.73e-01 92.3% 99.0%
1xf1A05 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.57 44.0 4.27e-01 86.8% 73.3%
2kd7A00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.57 39.0 3.27e-01 71.4% 40.3%
4rt0A00 2.40.10.220 Mainly Beta › Beta Barrel › Thrombin, subunit H › predicted glycosyltransferase like domains 0.57 49.0 4.65e-01 97.8% 89.9%
1etb200 2.60.40.180 Mainly Beta › Sandwich › Immunoglobulin-like › Transthyretin/hydroxyisourate hydrolase domain 0.56 47.0 4.38e-01 92.3% 80.3%
4qrlA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.56 46.0 4.33e-01 96.7% 73.6%
2qf4A02 2.40.10.350 Mainly Beta › Beta Barrel › Thrombin, subunit H › Rod shape-determining protein MreC, domain 2 0.56 47.0 4.70e-01 94.5% 92.3%
1jhjA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 39.0 3.28e-01 73.6% 96.3%
2w1sA00 2.60.120.260 Mainly Beta › Sandwich › Jelly Rolls › Galactose-binding domain-like 0.55 38.0 3.35e-01 72.5% 47.5%
3j4uH00 2.60.120.1110 Mainly Beta › Sandwich › Jelly Rolls › 0.55 42.0 3.64e-01 83.5% 52.9%
4m9fA00 2.40.10.120 Mainly Beta › Beta Barrel › Thrombin, subunit H › 0.55 50.0 3.84e-01 100.0% 80.5%
6kxkG01 2.60.40.150 Mainly Beta › Sandwich › Immunoglobulin-like › C2 domain 0.53 46.0 4.09e-01 96.7% 79.7%
4mamB03 3.30.470.20 Alpha Beta › 2-Layer Sandwich › D-amino Acid Aminotransferase; Chain A, domain 1 › ATP-grasp fold, B domain 0.53 44.0 3.50e-01 91.2% 83.5%
3lnnA02 2.40.30.170 Mainly Beta › Beta Barrel › Elongation Factor Tu (Ef-tu); domain 3 › Efflux pump adaptor protein, beta barrel domain 0.53 42.0 4.26e-01 90.1% 89.2%
4xvoA01 2.60.40.3710 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 38.0 3.91e-01 79.1% 94.4%
5wkfD01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.52 38.0 3.64e-01 79.1% 97.2%
5d2lE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.63e-01 79.1% 97.2%
1ymmE01 2.60.40.10 Mainly Beta › Sandwich › Immunoglobulin-like › Immunoglobulins 0.51 38.0 3.52e-01 79.1% 97.4%
5vqfD01 2.60.120.970 Mainly Beta › Sandwich › Jelly Rolls › 0.51 42.0 3.26e-01 93.4% 68.6%
1wruA01 2.30.300.10 Mainly Beta › Roll › Phage tail proteins - horseshoe like beta roll fold › Baseplate protein-like domain - beta roll fold 0.51 43.0 3.62e-01 100.0% 89.7%
5ao2B02 3.30.70.2760 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › 0.51 34.0 3.51e-01 70.3% 96.6%
4emoC00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 40.0 3.77e-01 87.9% 76.7%
1zc3B00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.50 39.0 3.71e-01 83.5% 72.5%
1ci3M02 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.50 28.0 3.33e-01 97.8% 84.5%
ECOD (61)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
3397483 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 70.0 4.83e-01 100.0% 39.3%
3407091 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 69.0 4.85e-01 100.0% 41.5%
3546992 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.75 69.0 4.81e-01 100.0% 41.1%
3406163 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 68.0 4.92e-01 100.0% 42.0%
3402403 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 68.0 4.73e-01 100.0% 37.5%
4125357 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 68.0 4.94e-01 100.0% 46.2%
4545500 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.74 68.0 4.93e-01 100.0% 44.0%
3390983 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.73 67.0 4.77e-01 100.0% 38.6%
3509860 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 66.0 4.66e-01 100.0% 40.7%
4672350 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.72 66.0 4.75e-01 100.0% 41.2%
3859610 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 66.0 4.86e-01 100.0% 44.9%
3557350 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 66.0 4.79e-01 100.0% 41.3%
3555390 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 66.0 4.73e-01 100.0% 40.0%
3394379 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 65.0 4.71e-01 100.0% 47.3%
3409584 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 65.0 4.57e-01 100.0% 38.1%
3411832 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 65.0 4.62e-01 100.0% 40.0%
3913731 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.71 65.0 4.55e-01 100.0% 36.0%
3395929 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 64.0 4.76e-01 100.0% 45.3%
3504702 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.70 61.0 4.54e-01 95.6% 42.7%
3545090 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.70 58.0 4.31e-01 100.0% 36.8%
3469125 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.70 62.0 5.47e-01 100.0% 68.5%
3783835 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.69 62.0 4.43e-01 98.9% 34.0%
3392873 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 64.0 4.69e-01 100.0% 41.3%
3939059 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.69 63.0 4.40e-01 100.0% 42.8%
3412938 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 63.0 4.57e-01 100.0% 39.9%
4995689 1.1.5.33 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin_2 0.68 57.0 4.41e-01 100.0% 40.9%
3512548 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 62.0 4.66e-01 100.0% 51.6%
3497558 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.68 62.0 4.45e-01 100.0% 45.1%
3772106 1.1.17.3 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin_2 0.68 57.0 4.23e-01 100.0% 36.9%
3230604 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.67 61.0 4.34e-01 100.0% 36.3%
3390982 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.67 61.0 4.50e-01 100.0% 41.2%
2411954 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.67 61.0 4.62e-01 100.0% 47.4%
4003172 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.67 60.0 4.66e-01 98.9% 57.9%
134809 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.66 60.0 4.45e-01 100.0% 44.3%
3997886 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.66 60.0 4.50e-01 100.0% 47.5%
3234434 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.65 59.0 4.20e-01 100.0% 41.5%
1217153 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.65 59.0 4.06e-01 100.0% 34.3%
3838513 1.1.5.0 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.64 57.0 4.31e-01 100.0% 47.3%
3633439 1.1.5.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Trypsin 0.64 57.0 4.06e-01 100.0% 37.8%
3940726 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.63 56.0 4.03e-01 100.0% 40.7%
4032900 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.62 53.0 5.07e-01 92.3% 99.0%
4231688 1.1.7.0 beta barrels › cradle loop barrel › RIFT-related › Alanine racemase-C 0.62 47.0 4.57e-01 81.3% 90.0%
3251431 1.1.1.1 beta barrels › cradle loop barrel › RIFT-related › acid protease › Asp 0.61 52.0 3.57e-01 97.8% 45.1%
3418896 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.61 52.0 4.28e-01 95.6% 53.5%
3452090 10.2.1.55 beta sandwiches › jelly-roll › Nucleoplasmin-like/VP (viral coat and capsid proteins) › Nucleoplasmin-like/VP (viral coat and capsid proteins) › NPL 0.60 37.0 3.52e-01 72.5% 52.4%
3650169 1.1.1.9 beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C 0.59 50.0 3.81e-01 97.8% 77.9%
169988 1.1.5.6 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › Peptidase_S7 0.58 46.0 3.80e-01 92.3% 45.7%
3966494 1.1.5.25 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel › PilZ 0.58 51.0 4.80e-01 98.9% 89.1%
3791975 1.1.17.1 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 2 › Trypsin 0.58 48.0 3.48e-01 92.3% 43.7%
3823331 1.1.1.9 beta barrels › cradle loop barrel › RIFT-related › acid protease › TAXi_C 0.58 49.0 3.77e-01 97.8% 71.4%
3487927 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.57 40.0 3.41e-01 72.5% 46.7%
1311889 1.1.5.7 beta barrels › cradle loop barrel › RIFT-related › FMN-binding split barrel 0.57 46.0 3.37e-01 85.7% 55.0%
None 0.57 45.0 3.80e-01 93.4% 48.2%
5037092 1.1.13.0 beta barrels › cradle loop barrel › RIFT-related › Phage tail proteins 0.57 38.0 4.23e-01 95.6% 90.0%
2730089 11.1.1.99 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Immunoglobulin/Fibronectin type III/E set domains/PapD-like › V-set 0.57 42.0 3.93e-01 80.2% 95.8%
3213774 11.1.4.0 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like 0.55 46.0 4.26e-01 93.4% 78.3%
3491694 10.32.1.0 beta sandwiches › jelly-roll › Galactose-binding domain-like › Galactose-binding domain-like 0.55 38.0 3.33e-01 70.3% 48.1%
3221614 11.1.4.7 beta sandwiches › Immunoglobulin-like beta-sandwich › Immunoglobulin-related › Prealbumin-like › TTR-52 0.54 46.0 4.05e-01 95.6% 64.3%
3743891 5095.1.1.1 beta sandwiches › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › N-terminal beta-sandwich domain in anthrax protective antigen › PA14 0.54 46.0 3.89e-01 96.7% 91.9%
3719793 601.23.1.1 alpha bundles › Four-helical up-and-down bundle › DNA repair protein MutS, domain III › DNA repair protein MutS, domain III › MutS_III 0.53 38.0 2.59e-01 93.4% 18.9%
1177147 220.1.1.41 beta barrels › PH domain-like › PH domain-like › PH domain-like › Sharpin_PH 0.50 40.0 3.76e-01 87.9% 76.1%
D4 medium residues 323-377
PDB
CATH (63)
Domain IDClass IDClassificationTM-scoreBitsE-valueQ covT cov
6iikB00 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.74 56.0 3.42e-01 81.8% 15.3%
6epkA02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.71 53.0 4.89e-01 81.8% 62.0%
1vjvA01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.71 53.0 3.33e-01 81.8% 17.8%
4cbvA02 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.71 55.0 4.28e-01 100.0% 39.8%
3p54A02 3.30.67.10 Alpha Beta › 2-Layer Sandwich › Viral Envelope Glycoprotein; domain 2 › Viral Envelope Glycoprotein, domain 2 0.70 53.0 4.87e-01 81.8% 64.8%
4g54A01 3.90.70.10 Alpha Beta › Alpha-Beta Complex › Cathepsin B; Chain A › Cysteine proteinases 0.68 56.0 4.38e-01 94.5% 86.4%
4m4zA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.67 47.0 4.99e-01 85.5% 87.2%
2oqbA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.67 58.0 4.68e-01 100.0% 88.0%
3ossC00 2.30.30.830 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 4.42e-01 72.7% 90.8%
2x4jA01 2.30.30.600 Mainly Beta › Roll › SH3 type barrels. › 0.66 46.0 3.75e-01 92.7% 39.2%
4cswA02 3.40.366.30 Alpha Beta › 3-Layer(aba) Sandwich › Malonyl-Coenzyme A Acyl Carrier Protein; domain 2 › 50S ribosomal protein L16 arginine hydroxylase; Chain A, Domain 2 0.66 51.0 3.62e-01 85.5% 30.7%
4x9cD00 2.30.30.100 Mainly Beta › Roll › SH3 type barrels. › 0.65 45.0 4.42e-01 92.7% 66.7%
5iqaA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.64 44.0 3.71e-01 70.9% 87.8%
3rriA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.64 45.0 3.49e-01 76.4% 39.7%
1ylxA00 3.30.70.1480 Alpha Beta › 2-Layer Sandwich › Alpha-Beta Plaits › GK1464-like 0.64 43.0 3.61e-01 70.9% 50.5%
1fx7B03 2.30.30.90 Mainly Beta › Roll › SH3 type barrels. › Ferrous iron transport protein A (FeoA) 0.63 52.0 4.72e-01 100.0% 66.3%
1ecsA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.63 43.0 3.49e-01 74.5% 44.2%
1udlA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.62 49.0 4.08e-01 100.0% 49.0%
3bs1A00 2.40.50.1020 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › LytTr DNA-binding domain 0.62 53.0 4.40e-01 100.0% 60.2%
2zdiB00 1.10.287.370 Mainly Alpha › Orthogonal Bundle › Helix Hairpins › 0.62 42.0 3.38e-01 70.9% 45.3%
3au4A04 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.62 51.0 4.47e-01 100.0% 89.2%
3h8zA02 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.61 43.0 4.18e-01 89.1% 65.6%
1ex4B02 2.30.30.10 Mainly Beta › Roll › SH3 type barrels. › Integrase, C-terminal domain superfamily, retroviral 0.61 44.0 4.34e-01 94.5% 72.9%
2dmoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.61 47.0 4.42e-01 100.0% 69.1%
3htyA00 2.40.128.280 Mainly Beta › Beta Barrel › Lipocalin › 0.61 44.0 3.75e-01 78.2% 77.7%
3p8aA02 2.60.40.4320 Mainly Beta › Sandwich › Immunoglobulin-like › 0.60 41.0 3.58e-01 72.7% 45.6%
7afrX02 2.30.30.180 Mainly Beta › Roll › SH3 type barrels. › Ribosome maturation factor RimP, C-terminal domain 0.60 44.0 4.36e-01 94.5% 75.0%
3d31A02 2.40.50.140 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › Nucleic acid-binding proteins 0.60 42.0 4.49e-01 74.5% 100.0%
3havA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.60 43.0 3.65e-01 76.4% 84.3%
4chjA00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 48.0 3.90e-01 100.0% 71.0%
2pqhB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 46.0 4.44e-01 100.0% 73.8%
1w1hD00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.59 50.0 3.84e-01 100.0% 62.0%
7cfdA01 2.30.30.140 Mainly Beta › Roll › SH3 type barrels. › 0.59 45.0 4.19e-01 96.4% 64.4%
4i8oA02 3.30.160.690 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › Bacterial toxin RNase RnlA/LsoA, N repeated domain 0.59 42.0 3.58e-01 74.5% 52.2%
1gcqB00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.59 45.0 4.53e-01 98.2% 82.5%
4bs9A01 3.90.930.60 Alpha Beta › Alpha-Beta Complex › Outer Surface Protein A; domain 3 › 0.59 40.0 3.45e-01 81.8% 42.1%
2z0lA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.58 48.0 3.14e-01 100.0% 43.6%
3d6wB01 2.40.50.40 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.58 48.0 4.57e-01 98.2% 90.0%
1tj6A00 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.58 48.0 3.95e-01 100.0% 87.8%
4omfB02 3.10.450.750 Alpha Beta › Roll › Nuclear Transport Factor 2; Chain: A, › 0.58 38.0 3.98e-01 80.0% 78.7%
2arzA02 3.20.180.10 Alpha Beta › Alpha-Beta Barrel › Split barrel-like › PNP-oxidase-like 0.58 45.0 3.91e-01 87.3% 59.1%
4iimA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.58 44.0 4.45e-01 100.0% 84.2%
1qqgA01 2.30.29.30 Mainly Beta › Roll › PH-domain like › Pleckstrin-homology domain (PH domain)/Phosphotyrosine-binding domain (PTB) 0.57 45.0 3.95e-01 100.0% 92.2%
1rwzA00 3.70.10.10 Alpha Beta › Box › Proliferating Cell Nuclear Antigen › 0.57 48.0 3.15e-01 96.4% 65.6%
4rt5A00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.56 38.0 3.15e-01 70.9% 38.6%
3bf5A01 3.40.1190.20 Alpha Beta › 3-Layer(aba) Sandwich › UDP-N-acetylmuramoyl-L-alanine:D-glutamate ligase › Ribokinase 0.56 39.0 2.63e-01 94.5% 17.2%
3lzhA01 3.30.200.20 Alpha Beta › 2-Layer Sandwich › Phosphorylase Kinase; domain 1 › Phosphorylase Kinase; domain 1 0.56 39.0 3.40e-01 74.5% 87.9%
1awoA00 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.55 43.0 4.28e-01 96.4% 84.2%
2rdgA02 2.40.50.110 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.55 44.0 4.13e-01 92.7% 100.0%
3fcdB00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.55 38.0 3.15e-01 78.2% 44.5%
1xovA03 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 4.06e-01 92.7% 80.6%
2yt4A03 3.30.160.20 Alpha Beta › 2-Layer Sandwich › Double Stranded RNA Binding Domain › 0.54 42.0 3.50e-01 87.3% 66.3%
3tzuA00 2.40.50.100 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › RNA polymerase II/Efflux pump adaptor protein, barrel-sandwich hybrid domain 0.54 44.0 3.54e-01 98.2% 76.4%
2krsA01 2.30.30.40 Mainly Beta › Roll › SH3 type barrels. › SH3 Domains 0.54 44.0 4.35e-01 98.2% 86.7%
3go5A01 2.40.50.330 Mainly Beta › Beta Barrel › OB fold (Dihydrolipoamide Acetyltransferase, E2P) › 0.53 40.0 3.73e-01 83.6% 83.1%
4mymA00 3.10.180.10 Alpha Beta › Roll › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase; domain 1 › 2,3-Dihydroxybiphenyl 1,2-Dioxygenase, domain 1 0.53 37.0 2.78e-01 74.5% 27.2%
4wqkA00 3.30.460.40 Alpha Beta › 2-Layer Sandwich › Beta Polymerase; domain 2 › 0.53 45.0 3.26e-01 100.0% 68.6%
2yj6A02 3.40.1110.10 Alpha Beta › 3-Layer(aba) Sandwich › Calcium-transporting ATPase, cytoplasmic domain N › Calcium-transporting ATPase, cytoplasmic domain N 0.52 38.0 3.25e-01 80.0% 73.7%
4gqzA00 2.60.40.3700 Mainly Beta › Sandwich › Immunoglobulin-like › 0.52 42.0 3.22e-01 100.0% 87.2%
5kmpB00 3.50.50.100 Alpha Beta › 3-Layer(bba) Sandwich › FAD/NAD(P)-binding domain › 0.51 43.0 2.64e-01 100.0% 34.9%
5w7zA01 3.10.150.10 Alpha Beta › Roll › DNA Polymerase III; Chain A, domain 2 › DNA Polymerase III, subunit A, domain 2 0.51 41.0 3.44e-01 100.0% 88.5%
3uuwB02 3.30.360.10 Alpha Beta › 2-Layer Sandwich › Dihydrodipicolinate Reductase; domain 2 › Dihydrodipicolinate Reductase; domain 2 0.51 42.0 3.02e-01 100.0% 77.2%
2cs7A00 3.10.50.90 Alpha Beta › Roll › Chitinase A; domain 3 › 0.50 42.0 4.28e-01 100.0% 98.2%
ECOD (70)
UIDF-IDClassificationTM-scoreBitsE-valueQ covT cov
5032233 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.79 57.0 4.40e-01 76.4% 37.4%
4961538 2002.1.1.256 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › MSH_C 0.76 56.0 3.28e-01 78.2% 21.4%
4009281 219.1.1.65 a+b complex topology › Cysteine proteinases-like › Cysteine proteinases › Cysteine proteinases › GspA_C39-like 0.75 52.0 4.18e-01 72.7% 94.3%
4927852 101.1.2.0 alpha arrays › HTH › HTH › winged helix domain 0.75 56.0 4.70e-01 80.0% 92.2%
5054597 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.74 57.0 5.13e-01 92.7% 61.3%
1318709 59.1.4.1 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.74 55.0 3.59e-01 80.0% 33.2%
4939065 227.1.1.1 a+b two layers › DNA clamp › DNA clamp › DNA clamp › PCNA_N 0.74 50.0 3.87e-01 74.5% 32.5%
4629529 2002.1.1.420 a/b barrels › TIM beta/alpha-barrel › TIM barrels › TIM barrels › HpcH_HpaI, PF25918 0.73 51.0 3.03e-01 74.5% 19.5%
5008645 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.72 57.0 5.12e-01 94.5% 62.7%
4963446 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.72 54.0 5.16e-01 81.8% 70.8%
3782688 59.1.4.1 beta complex topology › triple barrel › triple barrel › TFIID subunits TAF1-TAF7 › TAFII55_N 0.72 54.0 3.78e-01 81.8% 42.9%
5041872 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.71 54.0 4.93e-01 92.7% 61.3%
5012053 4.1.1.40 beta barrels › SH3 › SH3 › SH3 › FeoA 0.71 55.0 5.02e-01 98.2% 63.5%
3381974 2003.1.2.47 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › NDH2_C 0.69 46.0 3.07e-01 70.9% 18.2%
2048178 244.2.1.10 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › NDH2_C 0.67 45.0 4.32e-01 70.9% 62.1%
4971267 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.66 46.0 3.46e-01 72.7% 97.7%
3894742 4.1.1.54 beta barrels › SH3 › SH3 › SH3 › SH3_2 0.66 45.0 4.91e-01 94.5% 97.5%
5062211 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.66 46.0 3.16e-01 80.0% 20.5%
1482194 4.1.1.96 beta barrels › SH3 › SH3 › SH3 › Hfq 0.65 45.0 4.42e-01 92.7% 66.7%
3289164 295.1.1.25 a+b two layers › ssDNA-binding transcriptional regulator domain-like › ssDNA-binding transcriptional regulator domain › ssDNA-binding transcriptional regulator domain › DUF397 0.65 56.0 4.49e-01 98.2% 88.2%
3269549 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.65 54.0 4.03e-01 100.0% 60.0%
4955298 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.64 45.0 3.39e-01 72.7% 96.3%
4995140 2484.1.1.124 mixed a+b and a/b › Ribonuclease H-like › Ribonuclease H-like › Ribonuclease H-like › OrfB_IS605 0.64 43.0 3.22e-01 70.9% 94.5%
3841716 220.1.1.123 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.64 56.0 4.10e-01 100.0% 58.7%
3921879 220.1.1.1 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH 0.64 54.0 3.96e-01 100.0% 55.6%
3290127 2004.1.1.0 a/b three-layered sandwiches › P-loop domains-like › P-loop domains-related › P-loop containing nucleoside triphosphate hydrolases 0.64 47.0 3.18e-01 80.0% 69.5%
5010981 2.1.1.0 beta barrels › OB-fold › Nucleic acid-binding protein › Nucleic acid-binding protein 0.63 43.0 4.34e-01 92.7% 69.1%
4938091 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.63 44.0 3.25e-01 72.7% 97.9%
1688440 3454.1.1.3 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like › T2SSB 0.63 46.0 3.98e-01 78.2% 81.0%
3217113 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 45.0 4.29e-01 89.1% 66.2%
4031081 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.62 42.0 2.60e-01 70.9% 11.4%
2575643 4.1.1.8 beta barrels › SH3 › SH3 › SH3 › IN_DBD_C 0.62 47.0 4.41e-01 96.4% 63.8%
3885695 4.1.1.1 beta barrels › SH3 › SH3 › SH3 › SH3_1 0.62 50.0 4.44e-01 100.0% 61.3%
3608173 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.62 44.0 2.68e-01 76.4% 13.9%
4951978 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.61 44.0 3.13e-01 74.5% 82.9%
3860032 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 4.32e-01 100.0% 85.0%
4971800 246.2.1.1 a+b four layers › Carbon-nitrogen hydrolase-like › Metallo-dependent phosphatases › Metallo-dependent phosphatases › Metallophos 0.61 46.0 2.90e-01 100.0% 14.4%
3414375 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 53.0 4.13e-01 100.0% 71.1%
3255827 220.1.1.29 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.61 53.0 4.01e-01 100.0% 59.3%
3882213 220.1.1.0 beta barrels › PH domain-like › PH domain-like › PH domain-like 0.61 51.0 4.45e-01 100.0% 83.3%
3795635 220.1.1.29 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_3 0.61 51.0 3.87e-01 100.0% 73.1%
3747208 4.1.1.92 beta barrels › SH3 › SH3 › SH3 › SH3_9 0.61 46.0 4.17e-01 98.2% 58.7%
3278906 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.61 42.0 3.08e-01 74.5% 86.3%
4931543 3740.1.1.4 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_C 0.61 44.0 2.85e-01 85.5% 16.3%
3197429 244.2.1.10 a+b two layers › FAD-linked reductases, C-terminal domain-like › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › FAD/NAD-linked reduatases, dimerisation (C-terminal) domain › NDH2_C 0.60 42.0 2.63e-01 72.7% 12.9%
5879 324.1.1.1 a+b two layers › OsmC-like › OsmC-like › OsmC-like › OsmC 0.60 42.0 3.15e-01 70.9% 89.2%
4029825 148.1.1.0 alpha arrays › Histone-like › Histone-related › Histone 0.60 45.0 3.89e-01 80.0% 100.0%
4001872 220.1.1.123 beta barrels › PH domain-like › PH domain-like › PH domain-like › PH_SSH1-like_1st 0.60 50.0 3.59e-01 100.0% 54.1%
5007064 4312.1.1.0 a+b two layers › RelE-like › RelE-like › RelE-like 0.59 46.0 4.10e-01 81.8% 84.0%
5045214 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.59 46.0 4.27e-01 94.5% 67.1%
4316271 3018.1.1.0 a+b two layers › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like › MesJ substrate recognition domain-like 0.59 41.0 3.54e-01 72.7% 88.7%
3896415 220.1.1.7 beta barrels › PH domain-like › PH domain-like › PH domain-like › IRS 0.59 47.0 4.12e-01 100.0% 84.2%
3929784 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 44.0 4.67e-01 92.7% 90.0%
3921043 5.1.4.0 beta duplicates or obligate multimers › beta-propeller-like › beta-propeller › 7-bladed 0.58 45.0 2.75e-01 85.5% 98.0%
4959077 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 47.0 4.55e-01 94.5% 79.7%
3638884 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.58 46.0 4.00e-01 98.2% 55.6%
5035483 3755.3.1.0 alpha bundles › YscO-like › CT398 helical hairpin › CT398 helical hairpin 0.57 44.0 3.11e-01 83.6% 35.9%
3387014 3454.1.1.0 beta barrels › GspC HR domain/PilP-like › GspC HR domain/PilP-like › GspC HR domain/PilP-like 0.57 43.0 4.33e-01 81.8% 100.0%
4810374 3740.1.1.1 alpha arrays › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › F420-reducing hydrogenase subunit beta › FrhB_FdhB_N,FrhB_FdhB_C 0.57 41.0 2.74e-01 83.6% 17.5%
3933788 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.57 45.0 4.39e-01 96.4% 80.0%
4028887 109.1.1.11 alpha superhelices › Repetitive alpha hairpins › Glutathione S-transferase (GST)-C › Glutathione S-transferase (GST)-C › Arc1p_N_like 0.57 48.0 3.46e-01 100.0% 32.0%
3962182 7577.1.1.0 a/b three-layered sandwiches › PLP-dependent transferases › PLP-dependent transferases › PLP-dependent transferases 0.56 49.0 3.03e-01 100.0% 16.4%
3519861 4.1.1.0 beta barrels › SH3 › SH3 › SH3 0.56 43.0 4.22e-01 92.7% 76.7%
3847839 6129.1.1.0 beta barrels › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family › Repulsive guidance molecule (RGM) family 0.56 39.0 2.58e-01 72.7% 46.7%
3374343 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 44.0 3.03e-01 98.2% 52.7%
3955471 2003.1.2.58 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox, Pyr_redox_2 0.52 44.0 2.63e-01 100.0% 13.5%
4938012 2003.1.2.24 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain › Pyr_redox_2 0.52 44.0 2.68e-01 96.4% 18.9%
4975819 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.51 42.0 2.89e-01 100.0% 48.0%
3275134 2003.1.2.0 a/b three-layered sandwiches › Rossmann-like › Rossmann-related › FAD/NAD(P)-binding domain 0.50 42.0 2.50e-01 96.4% 13.5%
4197656 267.1.1.0 a+b complex topology › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain › Metal cation-transporting ATPase, ATP-binding domain 0.50 37.0 2.92e-01 78.2% 79.2%